RefSeq NC_017910.1
Accession number NC_017910.1
DoriC accession number ORI96000423
OriC length 371 nt
OriC AT content 0.541779
The location of oriC region 4111285..4111655 nt
Browse in NCBI
OriC map
OriC sequences
mioCAGATCGATCCTTTTTCTGTGGATAACAGGCTTAAGAACCGCTGATCAAGCGGTAGTTATCCAAAGAATAACCCTTGTACGCTTTTTGCCCTGTGTATAAGTCCCCAGATTGATCCCAGCTTATACTGGCCAGGATCACCGATCTTTCACAGCAAACGATCCTCCCTAACAGATTGATCTTAAATGCCGGATCCGGGTTACCCACAAGACAGGCCGATCCTAATAAGAGATCACAATAGAACAGATCTTTAAATAAAAAGATCTTCTTTTTATCAGCGACGATCCTGAGACTTTCTCCGTCGACTAAAGTTGAGTAGAATTCCCGCCCCGGGACAACCCACCCACATTCGCAACACCGCGAGGCAGTTAACCgidA
mioCAGATCGATCCTTTTTCTGTGGATAACAGGCTTAAGAACCGCTGATCAAGCGGTAGTTATCCAAAGAATAACCCTTGTACGCTTTTTGCCCTGTGTATAAGTCCCCAGATTGATCCCAGCTTATACTGGCCAGGATCACCGATCTTTCACAGCAAACGATCCTCCCTAACAGATTGATCTTAAATGCCGGATCCGGGTTACCCACAAGACAGGCCGATCCTAATAAGAGATCACAATAGAACAGATCTTTAAATAAAAAGATCTTCTTTTTATCAGCGACGATCCTGAGACTTTCTCCGTCGACTAAAGTTGAGTAGAATTCCCGCCCCGGGACAACCCACCCACATTCGCAACACCGCGAGGCAGTTAACCgidA
mioCAGATCGATCCTTTTTCTGTGGATAACAGGCTTAAGAACCGCTGATCAAGCGGTAGTTATCCAAAGAATAACCCTTGTACGCTTTTTGCCCTGTGTATAAGTCCCCAGATTGATCCCAGCTTATACTGGCCAGGATCACCGATCTTTCACAGCAAACGATCCTCCCTAACAGATTGATCTTAAATGCCGGATCCGGGTTACCCACAAGACAGGCCGATCCTAATAAGAGATCACAATAGAACAGATCTTTAAATAAAAAGATCTTCTTTTTATCAGCGACGATCCTGAGACTTTCTCCGTCGACTAAAGTTGAGTAGAATTCCCGCCCCGGGACAACCCACCCACATTCGCAACACCGCGAGGCAGTTAACCgidA
mioCAGATCGATCCTTTTTCTGTGGATAACAGGCTTAAGAACCGCTGATCAAGCGGTAGTTATCCAAAGAATAACCCTTGTACGCTTTTTGCCCTGTGTATAAGTCCCCAGATTGATCCCAGCTTATACTGGCCAGGATCACCGATCTTTCACAGCAAACGATCCTCCCTAACAGATTGATCTTAAATGCCGGATCCGGGTTACCCACAAGACAGGCCGATCCTAATAAGAGATCACAATAGAACAGATCTTTAAATAAAAAGATCTTCTTTTTATCAGCGACGATCCTGAGACTTTCTCCGTCGACTAAAGTTGAGTAGAATTCCCGCCCCGGGACAACCCACCCACATTCGCAACACCGCGAGGCAGTTAACCgidA
mioCAGATCGATCCTTTTTCTGTGGATAACAGGCTTAAGAACCGCTGATCAAGCGGTAGTTATCCAAAGAATAACCCTTGTACGCTTTTTGCCCTGTGTATAAGTCCCCAGATTGATCCCAGCTTATACTGGCCAGGATCACCGATCTTTCACAGCAAACGATCCTCCCTAACAGATTGATCTTAAATGCCGGATCCGGGTTACCCACAAGACAGGCCGATCCTAATAAGAGATCACAATAGAACAGATCTTTAAATAAAAAGATCTTCTTTTTATCAGCGACGATCCTGAGACTTTCTCCGTCGACTAAAGTTGAGTAGAATTCCCGCCCCGGGACAACCCACCCACATTCGCAACACCGCGAGGCAGTTAACCgidA
mioCAGATCGATCCTTTTTCTGTGGATAACAGGCTTAAGAACCGCTGATCAAGCGGTAGTTATCCAAAGAATAACCCTTGTACGCTTTTTGCCCTGTGTATAAGTCCCCAGATTGATCCCAGCTTATACTGGCCAGGATCACCGATCTTTCACAGCAAACGATCCTCCCTAACAGATTGATCTTAAATGCCGGATCCGGGTTACCCACAAGACAGGCCGATCCTAATAAGAGATCACAATAGAACAGATCTTTAAATAAAAAGATCTTCTTTTTATCAGCGACGATCCTGAGACTTTCTCCGTCGACTAAAGTTGAGTAGAATTCCCGCCCCGGGACAACCCACCCACATTCGCAACACCGCGAGGCAGTTAACCgidA
mioCAGATCGATCCTTTTTCTGTGGATAACAGGCTTAAGAACCGCTGATCAAGCGGTAGTTATCCAAAGAATAACCCTTGTACGCTTTTTGCCCTGTGTATAAGTCCCCAGATTGATCCCAGCTTATACTGGCCAGGATCACCGATCTTTCACAGCAAACGATCCTCCCTAACAGATTGATCTTAAATGCCGGATCCGGGTTACCCACAAGACAGGCCGATCCTAATAAGAGATCACAATAGAACAGATCTTTAAATAAAAAGATCTTCTTTTTATCAGCGACGATCCTGAGACTTTCTCCGTCGACTAAAGTTGAGTAGAATTCCCGCCCCGGGACAACCCACCCACATTCGCAACACCGCGAGGCAGTTAACCgidA
miocAGATCGATCCTTTTTCTGTGGATAACAGGCTTAAGAACCGCTGATCAAGCGGTAGTTATCCAAAGAATAACCCTTGTACGCTTTTTGCCCTGTGTATAAGTCCCCAGATTGATCCCAGCTTATACTGGCCAGGATCACCGATCTTTCACAGCAAACGATCCTCCCTAACAGATTGATCTTAAATGCCGGATCCGGGTTACCCACAAGACAGGCCGATCCTAATAAGAGATCACAATAGAACAGATCTTTAAATAAAAAGATCTTCTTTTTATCAGCGACGATCCTGAGACTTTCTCCGTCGACTAAAGTTGAGTAGAATTCCCGCCCCGGGACAACCCACCCACATTCGCAACACCGCGAGGCAGTTAACCgida
mioCAGATCGATCCTTTTTCTGTGGATAACAGGCTTAAGAACCGCTGATCAAGCGGTAGTTATCCAAAGAATAACCCTTGTACGCTTTTTGCCCTGTGTATAAGTCCCCAGATTGATCCCAGCTTATACTGGCCAGGATCACCGATCTTTCACAGCAAACGATCCTCCCTAACAGATTGATCTTAAATGCCGGATCCGGGTTACCCACAAGACAGGCCGATCCTAATAAGAGATCACAATAGAACAGATCTTTAAATAAAAAGATCTTCTTTTTATCAGCGACGATCCTGAGACTTTCTCCGTCGACTAAAGTTGAGTAGAATTCCCGCCCCGGGACAACCCACCCACATTCGCAACACCGCGAGGCAGTTAACCgidA
mioCAGATCGATCCTTTTTCTGTGGATAACAGGCTTAAGAACCGCTGATCAAGCGGTAGTTATCCAAAGAATAACCCTTGTACGCTTTTTGCCCTGTGTATAAGTCCCCAGATTGATCCCAGCTTATACTGGCCAGGATCACCGATCTTTCACAGCAAACGATCCTCCCTAACAGATTGATCTTAAATGCCGGATCCGGGTTACCCACAAGACAGGCCGATCCTAATAAGAGATCACAATAGAACAGATCTTTAAATAAAAAGATCTTCTTTTTATCAGCGACGATCCTGAGACTTTCTCCGTCGACTAAAGTTGAGTAGAATTCCCGCCCCGGGACAACCCACCCACATTCGCAACACCGCGAGGCAGTTAACCgidA
mioCAGATCGATCCTTTTTCTGTGGATAACAGGCTTAAGAACCGCTGATCAAGCGGTAGTTATCCAAAGAATAACCCTTGTACGCTTTTTGCCCTGTGTATAAGTCCCCAGATTGATCCCAGCTTATACTGGCCAGGATCACCGATCTTTCACAGCAAACGATCCTCCCTAACAGATTGATCTTAAATGCCGGATCCGGGTTACCCACAAGACAGGCCGATCCTAATAAGAGATCACAATAGAACAGATCTTTAAATAAAAAGATCTTCTTTTTATCAGCGACGATCCTGAGACTTTCTCCGTCGACTAAAGTTGAGTAGAATTCCCGCCCCGGGACAACCCACCCACATTCGCAACACCGCGAGGCAGTTAACCgidA
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif CGATCCT

StartP-valueSite
2796.78e-05TTATCAGCGACGATCCTGAGACTTTCT
2146.78e-05CAAGACAGGCCGATCCTAATAAGAGAT
1566.78e-05TCACAGCAAACGATCCTCCCTAACAGA
56.78e-05AGATCGATCCTTTTTCTGTGG
1391.30e-04CCAGGATCACCGATCTTTCACAGCAAA

Motif GATCTT

StartP-valueSite
2592.27e-04TAAATAAAAAGATCTTCTTTTTATCA
2432.27e-04CAATAGAACAGATCTTTAAATAAAAA
1752.27e-04CTAACAGATTGATCTTAAATGCCGGA

Motif GMGGYAGTT

StartP-valueSite
491.49e-06CGCTGATCAAGCGGTAGTTATCCAAAGAA
3596.47e-06GCAACACCGCGAGGCAGTTAACC
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI96000423 100.0 371 0 0 1 371 1 371 0.0 686
ORI95030441 84.536 291 41 4 43 331 67 355 0.0 285
ORI92720083 84.536 291 41 4 43 331 330 42 0.0 285
ORI92520073 84.536 291 41 4 43 331 330 42 0.0 285
ORI92520064 84.536 291 41 4 43 331 330 42 0.0 285
ORI95030469 84.192 291 42 4 43 331 330 42 0.0 279
ORI95030444 84.192 291 42 4 43 331 330 42 0.0 279
ORI95020132 84.192 291 42 4 43 331 330 42 0.0 279
ORI95030443 84.192 291 42 4 43 331 330 42 0.0 279
ORI95030442 84.192 291 42 4 43 331 330 42 0.0 279
ORI95020131 84.192 291 42 4 43 331 330 42 0.0 279
ORI95020129 84.192 291 42 4 43 331 49 337 0.0 279
ORI95030436 84.192 291 42 4 43 331 330 42 0.0 279
ORI92520071 84.192 291 42 4 43 331 49 337 0.0 279
ORI92520068 84.192 291 42 4 43 331 330 42 0.0 279
ORI92520067 84.192 291 42 4 43 331 330 42 0.0 279
ORI92230183 84.192 291 42 4 43 331 330 42 0.0 279
ORI10020023 84.192 291 42 4 43 331 330 42 0.0 279
ORI10020021 84.192 291 42 4 43 331 330 42 0.0 279
ORI10020015 84.192 291 42 4 43 331 49 337 0.0 279
ORI10020010 84.192 291 42 4 43 331 49 337 0.0 279
ORI10020009 84.192 291 42 4 43 331 330 42 0.0 279
ORI96000399 83.849 291 43 4 43 331 330 42 0.0 274
ORI92520070 83.849 291 43 4 43 331 330 42 0.0 274
ORI92520066 83.849 291 43 4 43 331 330 42 0.0 274
ORI92520065 83.849 291 43 4 43 331 330 42 0.0 274
ORI96000432 83.566 286 36 11 52 331 52 332 0.0 257
ORI94030400 82.818 291 46 4 43 331 330 42 0.0 257
ORI93030277 82.253 293 44 7 43 331 49 337 0.0 246
ORI92230179 80.844 308 50 8 16 319 22 324 0.0 233
ORI96000438 81.164 292 49 5 43 331 49 337 0.0 230
ORI96000437 81.164 292 49 5 43 331 49 337 0.0 230
ORI96000436 81.164 292 49 5 43 331 49 337 0.0 230
ORI96000414 81.164 292 49 5 43 331 330 42 0.0 230
ORI93020113 81.164 292 49 5 43 331 330 42 0.0 230
ORI94030301 81.164 292 49 5 43 331 330 42 0.0 230
ORI92720080 81.164 292 49 5 43 331 330 42 0.0 230
ORI92720079 81.164 292 49 5 43 331 330 42 0.0 230
ORI92720078 81.164 292 49 5 43 331 330 42 0.0 230
ORI92220053 81.164 292 49 5 43 331 330 42 0.0 230
ORI95020126 80.308 325 45 17 17 331 17 332 0.0 228
ORI93020120 80.368 326 43 18 17 331 17 332 0.0 228
ORI96000413 80.822 292 50 5 43 331 330 42 0.0 224
ORI96000412 80.822 292 50 5 43 331 330 42 0.0 224
ORI96000411 80.822 292 50 5 43 331 330 42 0.0 224
ORI96000410 80.822 292 50 5 43 331 330 42 0.0 224
ORI96000408 80.822 292 50 5 43 331 330 42 0.0 224
ORI96000406 80.822 292 50 5 43 331 330 42 0.0 224
ORI96000405 80.822 292 50 5 43 331 330 42 0.0 224
ORI96000404 80.822 292 50 5 43 331 330 42 0.0 224
ORI96000403 80.822 292 50 5 43 331 330 42 0.0 224
ORI96000402 80.822 292 50 5 43 331 330 42 0.0 224
ORI96000400 80.822 292 50 5 43 331 49 337 0.0 224
ORI96000368 80.822 292 50 5 43 331 330 42 0.0 224
ORI93020090 80.822 292 50 5 43 331 330 42 0.0 224
ORI96000365 80.822 292 50 5 43 331 330 42 0.0 224
ORI94030302 80.822 292 50 5 43 331 330 42 0.0 224
ORI94030299 80.822 292 50 5 43 331 330 42 0.0 224
ORI92320059 80.822 292 50 5 43 331 330 42 0.0 224
ORI92330196 80.822 292 50 5 43 331 330 42 0.0 224
ORI92220052 80.822 292 50 5 43 331 330 42 0.0 224
ORI50020036 80.822 292 50 5 43 331 330 42 0.0 224
ORI30020033 80.822 292 50 5 43 331 330 42 0.0 224
ORI10020028 80.822 292 50 5 43 331 330 42 0.0 224
ORI96000364 80.822 292 50 5 43 331 49 337 0.0 224
ORI10020012 80.822 292 50 5 43 331 330 42 0.0 224
ORI10020002 80.822 292 50 5 43 331 330 42 0.0 224
ORI10020001 80.822 292 50 5 43 331 49 337 0.0 224
ORI96000417 80.479 292 51 5 43 331 330 42 0.0 219
ORI96000416 80.479 292 51 5 43 331 330 42 0.0 219
ORI96000415 80.479 292 51 5 43 331 330 42 0.0 219
ORI96000409 80.479 292 51 5 43 331 330 42 0.0 219
ORI96000407 80.479 292 51 5 43 331 330 42 0.0 219
ORI96000401 80.479 292 51 5 43 331 330 42 0.0 219
ORI95030447 80.479 292 51 5 43 331 49 337 0.0 219
ORI93020102 80.479 292 51 5 43 331 49 337 0.0 219
ORI96000367 80.479 292 51 5 43 331 330 42 0.0 219
ORI93020098 80.479 292 51 5 43 331 330 42 0.0 219
ORI93020096 80.479 292 51 5 43 331 49 337 0.0 219
ORI93020093 80.479 292 51 5 43 331 330 42 0.0 219
ORI94030303 80.479 292 51 5 43 331 330 42 0.0 219
ORI94030298 80.479 292 51 5 43 331 330 42 0.0 219
ORI92330207 80.479 292 51 5 43 331 49 337 0.0 219
ORI92320058 80.479 292 51 5 43 331 49 337 0.0 219
ORI30020034 80.479 292 51 5 43 331 411 123 0.0 219
ORI10030083 80.479 292 51 5 43 331 49 337 0.0 219
ORI96000434 78.994 338 56 13 1 331 10 339 0.0 217
ORI95020130 78.994 338 56 13 1 331 372 43 0.0 217
ORI95020123 79.567 323 51 13 17 331 17 332 0.0 217
ORI93020089 78.994 338 56 13 1 331 372 43 0.0 217
ORI92020049 78.994 338 56 13 1 331 372 43 0.0 217
ORI93020111 79.321 324 54 11 14 331 23 339 0.0 215
ORI92520072 79.321 324 54 11 14 331 23 339 0.0 215
ORI96000390 80.137 292 52 5 43 331 330 42 0.0 213
ORI10030070 80.137 292 52 5 43 331 49 337 0.0 213
ORI10030036 80.137 292 52 5 43 331 49 337 0.0 213
ORI10030030 80.137 292 52 5 43 331 330 42 0.0 213
ORI96000393 78.698 338 57 13 1 331 372 43 0.0 211
ORI93020104 80.137 292 51 6 43 331 329 42 0.0 211
ORI93020103 80.205 293 49 8 43 331 49 336 0.0 211
ORI10030084 80.0 290 52 5 45 331 51 337 0.0 209
ORI94030388 78.659 328 58 11 10 331 364 43 0.0 207
ORI94030300 79.795 292 53 5 43 331 330 42 0.0 207
ORI96000429 79.027 329 42 22 17 331 17 332 0.0 200
ORI94030323 78.328 323 57 10 16 331 25 341 0.0 196
ORI92220054 76.435 331 55 20 17 335 26 345 1.2e-39 158
ORI80020043 78.161 261 39 17 111 362 261 10 2e-37 150
ORI94030361 76.834 259 46 13 111 362 261 10 2.02e-32 134
ORI96020517 78.652 178 30 8 111 285 120 292 9.44e-26 111
ORI95030439 75.0 276 51 17 17 284 23 288 9.44e-26 111
ORI92020050 74.286 280 60 11 89 362 283 10 1.22e-24 108
ORI96000376 74.806 258 53 11 111 362 120 371 4.39e-24 106
ORI96000375 74.806 258 53 11 111 362 261 10 4.39e-24 106
ORI96000374 74.806 258 53 11 111 362 261 10 4.39e-24 106
ORI93020117 74.806 258 53 11 111 362 261 10 4.39e-24 106
ORI92520061 74.903 259 51 12 111 362 120 371 4.39e-24 106
ORI90020045 74.806 258 53 11 111 362 120 371 4.39e-24 106
ORI20020031 74.806 258 53 11 111 362 261 10 4.39e-24 106
ORI20020030 74.806 258 53 11 111 362 261 10 4.39e-24 106
ORI10020019 74.806 258 53 11 111 362 261 10 4.39e-24 106
ORI92320057 73.929 280 61 11 89 362 98 371 5.68e-23 102
ORI92220056 75.325 231 46 10 111 335 261 36 2.04e-22 100
ORI94030310 77.528 178 28 9 111 283 256 86 2.64e-21 97
ORI93030282 76.966 178 29 9 111 283 255 85 1.23e-19 92
ORI96020516 76.404 178 34 8 111 285 192 20 4.42e-19 90
ORI10020018 76.404 178 34 8 111 285 180 8 4.42e-19 90
ORI10030027 76.404 178 34 8 111 285 180 8 4.42e-19 90
ORI93020097 73.381 278 57 15 52 321 318 50 1.59e-18 88