RefSeq NC_016832.1
Accession number NC_016832.1
DoriC accession number ORI95020129
OriC length 378 nt
OriC AT content 0.566138
The location of oriC region 3739346..3739723 nt
Browse in NCBI
OriC map
OriC sequences
mioCGTGTAAAGATCGTGCGATCTATTGTGGATAAATATGGTGAAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCTTTGTTCACTTTTTGAGTTGTGTATAAGTACCCGTTTTGATCCCAGCTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTTCCAACGCATTGATCTTTATTACAGGATCCGGGTTATCCACAGCCTGGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCGGATCCCGGGGCTTTCTCCATCGGCTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCACACCGCGTTATGCGAGGCAATTACCgidA
mioCGTGTAAAGATCGTGCGATCTATTGTGGATAAATATGGTGAAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCTTTGTTCACTTTTTGAGTTGTGTATAAGTACCCGTTTTGATCCCAGCTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTTCCAACGCATTGATCTTTATTACAGGATCCGGGTTATCCACAGCCTGGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCGGATCCCGGGGCTTTCTCCATCGGCTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCACACCGCGTTATGCGAGGCAATTACCgidA
mioCGTGTAAAGATCGTGCGATCTATTGTGGATAAATATGGTGAAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCTTTGTTCACTTTTTGAGTTGTGTATAAGTACCCGTTTTGATCCCAGCTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTTCCAACGCATTGATCTTTATTACAGGATCCGGGTTATCCACAGCCTGGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCGGATCCCGGGGCTTTCTCCATCGGCTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCACACCGCGTTATGCGAGGCAATTACCgidA
mioCGTGTAAAGATCGTGCGATCTATTGTGGATAAATATGGTGAAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCTTTGTTCACTTTTTGAGTTGTGTATAAGTACCCGTTTTGATCCCAGCTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTTCCAACGCATTGATCTTTATTACAGGATCCGGGTTATCCACAGCCTGGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCGGATCCCGGGGCTTTCTCCATCGGCTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCACACCGCGTTATGCGAGGCAATTACCgidA
mioCGTGTAAAGATCGTGCGATCTATTGTGGATAAATATGGTGAAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCTTTGTTCACTTTTTGAGTTGTGTATAAGTACCCGTTTTGATCCCAGCTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTTCCAACGCATTGATCTTTATTACAGGATCCGGGTTATCCACAGCCTGGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCGGATCCCGGGGCTTTCTCCATCGGCTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCACACCGCGTTATGCGAGGCAATTACCgidA
mioCGTGTAAAGATCGTGCGATCTATTGTGGATAAATATGGTGAAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCTTTGTTCACTTTTTGAGTTGTGTATAAGTACCCGTTTTGATCCCAGCTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTTCCAACGCATTGATCTTTATTACAGGATCCGGGTTATCCACAGCCTGGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCGGATCCCGGGGCTTTCTCCATCGGCTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCACACCGCGTTATGCGAGGCAATTACCgidA
mioCGTGTAAAGATCGTGCGATCTATTGTGGATAAATATGGTGAAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCTTTGTTCACTTTTTGAGTTGTGTATAAGTACCCGTTTTGATCCCAGCTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTTCCAACGCATTGATCTTTATTACAGGATCCGGGTTATCCACAGCCTGGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCGGATCCCGGGGCTTTCTCCATCGGCTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCACACCGCGTTATGCGAGGCAATTACCgidA
miocGTGTAAAGATCGTGCGATCTATTGTGGATAAATATGGTGAAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCTTTGTTCACTTTTTGAGTTGTGTATAAGTACCCGTTTTGATCCCAGCTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTTCCAACGCATTGATCTTTATTACAGGATCCGGGTTATCCACAGCCTGGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCGGATCCCGGGGCTTTCTCCATCGGCTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCACACCGCGTTATGCGAGGCAATTACCgida
mioCGTGTAAAGATCGTGCGATCTATTGTGGATAAATATGGTGAAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCTTTGTTCACTTTTTGAGTTGTGTATAAGTACCCGTTTTGATCCCAGCTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTTCCAACGCATTGATCTTTATTACAGGATCCGGGTTATCCACAGCCTGGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCGGATCCCGGGGCTTTCTCCATCGGCTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCACACCGCGTTATGCGAGGCAATTACCgidA
mioCGTGTAAAGATCGTGCGATCTATTGTGGATAAATATGGTGAAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCTTTGTTCACTTTTTGAGTTGTGTATAAGTACCCGTTTTGATCCCAGCTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTTCCAACGCATTGATCTTTATTACAGGATCCGGGTTATCCACAGCCTGGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCGGATCCCGGGGCTTTCTCCATCGGCTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCACACCGCGTTATGCGAGGCAATTACCgidA
mioCGTGTAAAGATCGTGCGATCTATTGTGGATAAATATGGTGAAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCTTTGTTCACTTTTTGAGTTGTGTATAAGTACCCGTTTTGATCCCAGCTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTTCCAACGCATTGATCTTTATTACAGGATCCGGGTTATCCACAGCCTGGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCGGATCCCGGGGCTTTCTCCATCGGCTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCACACCGCGTTATGCGAGGCAATTACCgidA
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif ACMBSKHGTKATCC

StartP-valueSite
547.69e-08GCTTGGATCAACCGGTAGTTATCCAAAGAATAAC
1541.21e-07CCGATCATTCACAGCTAGTGATCCTTTCCAACGC
1085.73e-07GTGTATAAGTACCCGTTTTGATCCCAGCTTATAC
2122.08e-06GTTATCCACAGCCTGGTGCGATCCTAATAAGAGA
3532.79e-06ATCCATTTTCACACCGCGTTATGCGAGGCAATTA

Motif CCCGGG

StartP-valueSite
3321.04e-04GAATCCACCGCCCGGGCTTCAATCCA
2891.04e-04TAGCCCGGATCCCGGGGCTTTCTCCA
1972.34e-04TATTACAGGATCCGGGTTATCCACAG
2823.76e-04TTTTTAATAGCCCGGATCCCGGGGCT

Motif AVAGATC

StartP-valueSite
2627.83e-05CTCTAAATAAAAAGATCTTCTTTTTAA
57.83e-05GTGTAAAGATCGTGCGATCTA
2311.36e-04GATCCTAATAAGAGATCACAATAGAAC
2462.02e-04TCACAATAGAACAGATCTCTAAATAAA
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI95020129 100.0 378 0 0 1 378 1 378 0.0 699
ORI10020015 100.0 378 0 0 1 378 1 378 0.0 699
ORI10020010 100.0 378 0 0 1 378 1 378 0.0 699
ORI92520068 98.942 378 4 0 1 378 378 1 0.0 676
ORI96000399 98.677 378 5 0 1 378 378 1 0.0 671
ORI95030441 98.677 378 5 0 1 378 19 396 0.0 671
ORI92720083 98.677 378 5 0 1 378 378 1 0.0 671
ORI92520073 98.677 378 5 0 1 378 378 1 0.0 671
ORI92520067 98.677 378 5 0 1 378 378 1 0.0 671
ORI92520066 98.677 378 5 0 1 378 378 1 0.0 671
ORI92520065 98.677 378 5 0 1 378 378 1 0.0 671
ORI92520064 98.677 378 5 0 1 378 378 1 0.0 671
ORI10020021 98.677 378 5 0 1 378 378 1 0.0 671
ORI95020132 98.413 378 6 0 1 378 378 1 0.0 665
ORI92520071 98.413 378 6 0 1 378 1 378 0.0 665
ORI92230183 98.413 378 6 0 1 378 378 1 0.0 665
ORI10020023 98.413 378 6 0 1 378 378 1 0.0 665
ORI10020009 98.413 378 6 0 1 378 378 1 0.0 665
ORI95030469 98.408 377 6 0 2 378 377 1 0.0 664
ORI95030444 98.408 377 6 0 2 378 377 1 0.0 664
ORI95030443 98.408 377 6 0 2 378 377 1 0.0 664
ORI95030442 98.408 377 6 0 2 378 377 1 0.0 664
ORI95020131 98.408 377 6 0 2 378 377 1 0.0 664
ORI95030436 98.408 377 6 0 2 378 377 1 0.0 664
ORI92520070 98.148 378 7 0 1 378 378 1 0.0 660
ORI94030400 93.915 378 23 0 1 378 378 1 0.0 571
ORI92230179 92.328 378 28 1 1 378 1 377 0.0 536
ORI93030277 91.029 379 32 2 1 378 1 378 0.0 510
ORI92230170 87.5 376 39 5 7 378 372 1 0.0 427
ORI96000414 86.863 373 47 2 7 378 372 1 0.0 416
ORI96000401 86.863 373 47 2 7 378 372 1 0.0 416
ORI93020113 86.863 373 47 2 7 378 372 1 0.0 416
ORI94030303 86.863 373 47 2 7 378 372 1 0.0 416
ORI92720080 86.863 373 47 2 7 378 372 1 0.0 416
ORI96000422 86.595 373 48 2 7 378 372 1 0.0 411
ORI96000408 86.595 373 48 2 7 378 372 1 0.0 411
ORI96000405 86.595 373 48 2 7 378 372 1 0.0 411
ORI96000400 86.28 379 50 2 1 378 1 378 0.0 411
ORI96000390 86.595 373 48 2 7 378 372 1 0.0 411
ORI93020099 86.595 373 48 2 7 378 372 1 0.0 411
ORI93020090 86.595 373 48 2 7 378 372 1 0.0 411
ORI92720076 86.595 373 48 2 7 378 372 1 0.0 411
ORI92330196 86.595 373 48 2 7 378 372 1 0.0 411
ORI92220052 86.595 373 48 2 7 378 372 1 0.0 411
ORI96000364 86.28 379 50 2 1 378 1 378 0.0 411
ORI10030070 86.28 379 50 2 1 378 1 378 0.0 411
ORI10030036 86.28 379 50 2 1 378 1 378 0.0 411
ORI10030030 86.595 373 48 2 7 378 372 1 0.0 411
ORI10020005 86.595 373 48 2 7 378 372 1 0.0 411
ORI10020004 86.595 373 48 2 7 378 372 1 0.0 411
ORI10020002 86.595 373 48 2 7 378 372 1 0.0 411
ORI10020001 86.28 379 50 2 1 378 1 378 0.0 411
ORI96000438 86.016 379 51 2 1 378 1 378 0.0 405
ORI96000437 86.016 379 51 2 1 378 1 378 0.0 405
ORI96000436 86.016 379 51 2 1 378 1 378 0.0 405
ORI96000416 86.327 373 49 2 7 378 372 1 0.0 405
ORI96000411 86.327 373 49 2 7 378 372 1 0.0 405
ORI96000410 86.327 373 49 2 7 378 372 1 0.0 405
ORI96000409 86.327 373 49 2 7 378 372 1 0.0 405
ORI96000368 86.327 373 49 2 7 378 372 1 0.0 405
ORI93020102 86.016 379 51 2 1 378 1 378 0.0 405
ORI96000367 86.327 373 49 2 7 378 372 1 0.0 405
ORI93020098 86.327 373 49 2 7 378 372 1 0.0 405
ORI93020096 86.016 379 51 2 1 378 1 378 0.0 405
ORI93020093 86.327 373 49 2 7 378 372 1 0.0 405
ORI94030302 86.327 373 49 2 7 378 372 1 0.0 405
ORI94030301 86.327 373 49 2 7 378 372 1 0.0 405
ORI94030298 86.327 373 49 2 7 378 372 1 0.0 405
ORI92720078 86.327 373 49 2 7 378 372 1 0.0 405
ORI92330207 86.016 379 51 2 1 378 1 378 0.0 405
ORI92320059 86.327 373 49 2 7 378 372 1 0.0 405
ORI92320058 86.016 379 51 2 1 378 1 378 0.0 405
ORI92220053 86.327 373 49 2 7 378 372 1 0.0 405
ORI30020034 86.327 373 49 2 7 378 453 82 0.0 405
ORI30020033 86.327 373 49 2 7 378 372 1 0.0 405
ORI10030083 86.016 379 51 2 1 378 1 378 0.0 405
ORI93020104 86.327 373 48 3 7 378 371 1 0.0 403
ORI96000417 86.059 373 50 2 7 378 372 1 0.0 399
ORI96000415 86.059 373 50 2 7 378 372 1 0.0 399
ORI96000413 86.059 373 50 2 7 378 372 1 0.0 399
ORI96000412 86.059 373 50 2 7 378 372 1 0.0 399
ORI96000407 86.059 373 50 2 7 378 372 1 0.0 399
ORI96000406 86.059 373 50 2 7 378 372 1 0.0 399
ORI96000404 86.059 373 50 2 7 378 372 1 0.0 399
ORI96000403 86.059 373 50 2 7 378 372 1 0.0 399
ORI96000402 86.059 373 50 2 7 378 372 1 0.0 399
ORI95030447 85.752 379 52 2 1 378 1 378 0.0 399
ORI96000365 86.059 373 50 2 7 378 372 1 0.0 399
ORI94030299 86.059 373 50 2 7 378 372 1 0.0 399
ORI50020036 86.059 373 50 2 7 378 372 1 0.0 399
ORI10020028 86.059 373 50 2 7 378 372 1 0.0 399
ORI10020012 86.059 373 50 2 7 378 372 1 0.0 399
ORI93020103 85.789 380 49 5 1 378 1 377 0.0 398
ORI92720079 85.791 373 51 2 7 378 372 1 0.0 394
ORI94030300 85.523 373 52 2 7 378 372 1 0.0 388
ORI10030084 85.224 379 54 2 1 378 1 378 0.0 388
ORI94030323 85.0 380 43 11 1 372 4 377 0.0 374
ORI96000432 84.409 372 47 11 7 372 1 367 0.0 355
ORI96000434 84.085 377 47 9 2 372 5 374 0.0 351
ORI96000393 84.127 378 45 11 2 372 377 8 0.0 351
ORI95020130 84.085 377 47 9 2 372 377 8 0.0 351
ORI93020089 84.085 377 47 9 2 372 377 8 0.0 351
ORI92020049 84.085 377 47 9 2 372 377 8 0.0 351
ORI93020111 83.202 381 56 7 2 378 5 381 0.0 342
ORI92520072 83.202 381 56 7 2 378 5 381 0.0 342
ORI94030388 82.776 389 45 18 2 378 379 1 0.0 327
ORI93020120 83.019 371 54 7 7 372 1 367 0.0 327
ORI95020126 82.888 374 49 13 7 372 1 367 0.0 322
ORI96000429 81.989 372 56 10 7 372 1 367 0.0 305
ORI95020123 81.941 371 58 9 7 372 1 367 0.0 305
ORI96000423 84.192 291 42 4 49 337 43 331 0.0 279
ORI94030317 76.173 277 55 10 20 290 361 90 5.72e-33 135