RefSeq NC_013364.1
Accession number NC_013364.1
DoriC accession number ORI93020104
OriC length 377 nt
OriC AT content 0.562334
The location of oriC region 4601963..4602339 nt
Browse in NCBI
OriC map
OriC sequences
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCCTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCCTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCCTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCCTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCCTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCCTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCCTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
gidaGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCCTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioc
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCCTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCCTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCCTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif CCGKKGATCCTDG

StartP-valueSite
2314.49e-07CTGTGAATGATCGGTGATCCTGGACCGTATAAG
2995.64e-07AACTGAACAACCGTTGTTCCTTGGATAACTACC
855.64e-07TTGAGAAAGACCTGGGATCCTGGGTATTAAAAA
3211.34e-06GGATAACTACCGGTTGATCCAAGCTTCCTGACA
481.88e-06GAAGCCCGGGCCGTGGATTCTACTCAACTTTGT

Motif ARGATC

StartP-valueSite
2102.54e-04CAACCTGGAAAGGATCATTAACTGTG
1782.54e-04GTGGATAACAAGGATCCGGCTTTTAA
1532.54e-04ATCTCTTATTAGGATCGCACTCCCTG
1925.62e-04TCCGGCTTTTAAGATCAACAACCTGG
1095.62e-04TATTAAAAAGAAGATCTATTTATTTA

Motif CGGCTT

StartP-valueSite
1841.73e-04AACAAGGATCCGGCTTTTAAGATCAA
711.73e-04TCAACTTTGTCGGCTTGAGAAAGACC
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI93020104 100.0 377 0 0 1 377 1 377 0.0 697
ORI96000416 99.735 378 0 1 1 377 1 378 0.0 691
ORI96000409 99.735 378 0 1 1 377 1 378 0.0 691
ORI93020103 99.735 377 1 0 1 377 377 1 0.0 691
ORI93020102 99.735 378 0 1 1 377 378 1 0.0 691
ORI96000367 99.735 378 0 1 1 377 1 378 0.0 691
ORI93020098 99.735 378 0 1 1 377 1 378 0.0 691
ORI93020096 99.735 378 0 1 1 377 378 1 0.0 691
ORI93020093 99.735 378 0 1 1 377 1 378 0.0 691
ORI94030298 99.735 378 0 1 1 377 1 378 0.0 691
ORI92330207 99.735 378 0 1 1 377 378 1 0.0 691
ORI92320058 99.735 378 0 1 1 377 378 1 0.0 691
ORI10030070 99.735 378 0 1 1 377 378 1 0.0 691
ORI96000417 99.471 378 1 1 1 377 1 378 0.0 686
ORI96000415 99.471 378 1 1 1 377 1 378 0.0 686
ORI96000407 99.471 378 1 1 1 377 1 378 0.0 686
ORI95030447 99.471 378 1 1 1 377 378 1 0.0 686
ORI92220052 99.471 378 1 1 1 377 1 378 0.0 686
ORI96000438 99.206 378 2 1 1 377 378 1 0.0 680
ORI96000437 99.206 378 2 1 1 377 378 1 0.0 680
ORI96000436 99.206 378 2 1 1 377 378 1 0.0 680
ORI96000414 99.206 378 2 1 1 377 1 378 0.0 680
ORI96000411 99.206 378 2 1 1 377 1 378 0.0 680
ORI96000408 99.206 378 2 1 1 377 1 378 0.0 680
ORI96000405 99.206 378 2 1 1 377 1 378 0.0 680
ORI96000400 99.206 378 2 1 1 377 378 1 0.0 680
ORI93020113 99.206 378 2 1 1 377 1 378 0.0 680
ORI93020090 99.206 378 2 1 1 377 1 378 0.0 680
ORI94030302 99.206 378 2 1 1 377 1 378 0.0 680
ORI94030301 99.206 378 2 1 1 377 1 378 0.0 680
ORI92720080 99.206 378 2 1 1 377 1 378 0.0 680
ORI92720078 99.206 378 2 1 1 377 1 378 0.0 680
ORI92320059 99.206 378 2 1 1 377 1 378 0.0 680
ORI92330196 99.206 378 2 1 1 377 1 378 0.0 680
ORI92220053 99.206 378 2 1 1 377 1 378 0.0 680
ORI96000364 99.206 378 2 1 1 377 378 1 0.0 680
ORI10020002 99.206 378 2 1 1 377 1 378 0.0 680
ORI10020001 99.206 378 2 1 1 377 378 1 0.0 680
ORI96000422 98.942 378 3 1 1 377 1 378 0.0 675
ORI96000410 98.942 378 3 1 1 377 1 378 0.0 675
ORI96000406 98.942 378 3 1 1 377 1 378 0.0 675
ORI96000368 98.942 378 3 1 1 377 1 378 0.0 675
ORI93020099 98.942 378 3 1 1 377 1 378 0.0 675
ORI96000365 98.942 378 3 1 1 377 1 378 0.0 675
ORI92720076 98.942 378 3 1 1 377 1 378 0.0 675
ORI30020033 98.942 378 3 1 1 377 1 378 0.0 675
ORI10030084 98.942 378 3 1 1 377 378 1 0.0 675
ORI10030083 98.942 378 3 1 1 377 378 1 0.0 675
ORI10020005 98.942 378 3 1 1 377 1 378 0.0 675
ORI10020004 98.942 378 3 1 1 377 1 378 0.0 675
ORI96000413 98.677 378 4 1 1 377 1 378 0.0 669
ORI96000412 98.677 378 4 1 1 377 1 378 0.0 669
ORI96000404 98.677 378 4 1 1 377 1 378 0.0 669
ORI96000403 98.677 378 4 1 1 377 1 378 0.0 669
ORI96000402 98.677 378 4 1 1 377 1 378 0.0 669
ORI96000401 98.677 378 4 1 1 377 1 378 0.0 669
ORI94030303 98.677 378 4 1 1 377 1 378 0.0 669
ORI94030299 98.677 378 4 1 1 377 1 378 0.0 669
ORI92720079 98.677 378 4 1 1 377 1 378 0.0 669
ORI50020036 98.677 378 4 1 1 377 1 378 0.0 669
ORI10020028 98.677 378 4 1 1 377 1 378 0.0 669
ORI10020012 98.677 378 4 1 1 377 1 378 0.0 669
ORI96000390 98.413 378 5 1 1 377 1 378 0.0 664
ORI94030300 98.413 378 5 1 1 377 1 378 0.0 664
ORI10030036 98.413 378 5 1 1 377 378 1 0.0 664
ORI10030030 98.413 378 5 1 1 377 1 378 0.0 664
ORI30020034 98.148 378 6 1 1 377 82 459 0.0 658
ORI93030277 89.71 379 36 3 1 377 378 1 0.0 481
ORI92230170 88.71 372 41 1 1 371 1 372 0.0 453
ORI96000399 86.828 372 48 1 1 371 1 372 0.0 414
ORI92520066 86.828 372 48 1 1 371 1 372 0.0 414
ORI92520065 86.828 372 48 1 1 371 1 372 0.0 414
ORI94030323 86.737 377 41 9 7 377 377 4 0.0 411
ORI92520068 86.559 372 49 1 1 371 1 372 0.0 409
ORI95030469 86.29 372 50 1 1 371 1 372 0.0 403
ORI95030444 86.29 372 50 1 1 371 1 372 0.0 403
ORI95020132 86.29 372 50 1 1 371 1 372 0.0 403
ORI95030443 86.29 372 50 1 1 371 1 372 0.0 403
ORI95030442 86.29 372 50 1 1 371 1 372 0.0 403
ORI95020131 86.29 372 50 1 1 371 1 372 0.0 403
ORI95020129 86.016 379 50 3 1 377 378 1 0.0 403
ORI95030441 85.979 378 52 1 1 377 396 19 0.0 403
ORI95030436 86.29 372 50 1 1 371 1 372 0.0 403
ORI92720083 86.29 372 50 1 1 371 1 372 0.0 403
ORI92520073 86.29 372 50 1 1 371 1 372 0.0 403
ORI92520067 86.29 372 50 1 1 371 1 372 0.0 403
ORI92520064 86.29 372 50 1 1 371 1 372 0.0 403
ORI10020021 86.29 372 50 1 1 371 1 372 0.0 403
ORI10020015 86.016 379 50 3 1 377 378 1 0.0 403
ORI10020010 86.016 379 50 3 1 377 378 1 0.0 403
ORI10020009 86.29 372 50 1 1 371 1 372 0.0 403
ORI96000434 86.126 382 38 11 1 374 381 7 0.0 398
ORI95020130 86.28 379 37 11 1 371 1 372 0.0 398
ORI94030400 86.059 373 49 3 1 371 1 372 0.0 398
ORI93020089 86.28 379 37 11 1 371 1 372 0.0 398
ORI92520071 85.714 378 53 1 1 377 378 1 0.0 398
ORI92230183 86.022 372 51 1 1 371 1 372 0.0 398
ORI92020049 86.28 379 37 11 1 371 1 372 0.0 398
ORI10020023 86.022 372 51 1 1 371 1 372 0.0 398
ORI96000393 86.016 379 38 11 1 371 1 372 0.0 392
ORI92520070 85.753 372 52 1 1 371 1 372 0.0 392
ORI92230179 85.791 373 45 7 1 369 377 9 0.0 388
ORI92520072 85.564 381 42 11 1 374 381 7 0.0 387
ORI94030388 86.141 368 37 13 1 360 1 362 0.0 385
ORI93020111 85.302 381 43 11 1 374 381 7 0.0 381
ORI96000432 83.862 378 50 11 1 371 374 1 0.0 350
ORI95020123 81.383 376 63 7 1 371 374 1 0.0 300
ORI93020120 81.481 378 59 10 1 371 374 1 0.0 300
ORI95020126 80.952 378 61 11 1 371 374 1 0.0 289
ORI96000429 80.688 378 62 11 1 371 374 1 0.0 283
ORI96000423 80.137 292 51 6 42 329 331 43 0.0 211
ORI93020094 76.543 243 45 11 89 325 289 53 4.44e-29 122