RefSeq NC_006511.1
Accession number NC_006511.1
DoriC accession number ORI10020021
OriC length 378 nt
OriC AT content 0.555556
The location of oriC region 3858807..3859184 nt
Browse in NCBI
OriC map
OriC sequences
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGAACGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGAACGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGAACGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGAACGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGAACGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGAACGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGAACGCACGATCTTTACACmioC
gidaGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGAACGCACGATCTTTACACmioc
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGAACGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGAACGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGAACGCACGATCTTTACACmioC
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif MMCDVGCKGTGRAT

StartP-valueSite
427.08e-08TGGATTGAAGCCCGGGCGGTGGATTCTACTCAAC
2161.92e-07TGGAAAGGATCACTAGCTGTGAATGATCGGTGAT
1611.92e-07TTAGGATCGCACCAGGCTGTGGATAACCCGGATC
3162.58e-06TTCTTTGGATAACTACCGGTTGATCCAAGCTTTC
174.26e-06TGCCTCGCATAACGCGGTGTGAAAATGGATTGAA

Motif CBGGGATC

StartP-valueSite
869.19e-06GGAGAAAGCCCCGGGATCCGGGCTATTA
1772.78e-05CTGTGGATAACCCGGATCCTGTAATAAA
2553.96e-05CCCGTATAAGCTGGGATCAAAACGGGTA
2338.13e-05TGTGAATGATCGGTGATCGTGGCCCGTA

Motif GATCTBT

StartP-valueSite
3687.21e-05TGGAACGCACGATCTTTACAC
1117.21e-05TTAAAAAGAAGATCTTTTTATTTAGAG
1421.28e-04GTTCTATTGTGATCTCTTATTAGGATC
1271.92e-04TTTATTTAGAGATCTGTTCTATTGTGA
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI92520067 100.0 378 0 0 1 378 1 378 0.0 699
ORI10020021 100.0 378 0 0 1 378 1 378 0.0 699
ORI92520068 99.735 378 1 0 1 378 1 378 0.0 693
ORI96000399 99.471 378 2 0 1 378 1 378 0.0 688
ORI95030441 99.471 378 2 0 1 378 396 19 0.0 688
ORI92720083 99.471 378 2 0 1 378 1 378 0.0 688
ORI92520073 99.471 378 2 0 1 378 1 378 0.0 688
ORI92520066 99.471 378 2 0 1 378 1 378 0.0 688
ORI92520065 99.471 378 2 0 1 378 1 378 0.0 688
ORI92520064 99.471 378 2 0 1 378 1 378 0.0 688
ORI95020132 99.206 378 3 0 1 378 1 378 0.0 682
ORI92520071 99.206 378 3 0 1 378 378 1 0.0 682
ORI92230183 99.206 378 3 0 1 378 1 378 0.0 682
ORI10020023 99.206 378 3 0 1 378 1 378 0.0 682
ORI10020009 99.206 378 3 0 1 378 1 378 0.0 682
ORI95030469 99.204 377 3 0 1 377 1 377 0.0 680
ORI95030444 99.204 377 3 0 1 377 1 377 0.0 680
ORI95030443 99.204 377 3 0 1 377 1 377 0.0 680
ORI95030442 99.204 377 3 0 1 377 1 377 0.0 680
ORI95020131 99.204 377 3 0 1 377 1 377 0.0 680
ORI95030436 99.204 377 3 0 1 377 1 377 0.0 680
ORI92520070 98.942 378 4 0 1 378 1 378 0.0 676
ORI95020129 98.677 378 5 0 1 378 378 1 0.0 671
ORI10020015 98.677 378 5 0 1 378 378 1 0.0 671
ORI10020010 98.677 378 5 0 1 378 378 1 0.0 671
ORI94030400 94.18 378 22 0 1 378 1 378 0.0 577
ORI92230179 92.328 378 28 1 1 378 377 1 0.0 536
ORI93030277 91.029 379 32 2 1 378 378 1 0.0 510
ORI96000401 87.366 372 47 0 1 372 1 372 0.0 427
ORI94030303 87.366 372 47 0 1 372 1 372 0.0 427
ORI92230170 87.5 376 39 5 1 372 1 372 0.0 427
ORI96000414 86.828 372 49 0 1 372 1 372 0.0 416
ORI96000411 86.828 372 49 0 1 372 1 372 0.0 416
ORI93020113 86.828 372 49 0 1 372 1 372 0.0 416
ORI94030302 86.828 372 49 0 1 372 1 372 0.0 416
ORI92720080 86.828 372 49 0 1 372 1 372 0.0 416
ORI92320059 86.828 372 49 0 1 372 1 372 0.0 416
ORI30020034 86.828 372 49 0 1 372 82 453 0.0 416
ORI96000422 86.559 372 50 0 1 372 1 372 0.0 411
ORI96000408 86.559 372 50 0 1 372 1 372 0.0 411
ORI96000405 86.559 372 50 0 1 372 1 372 0.0 411
ORI96000400 86.243 378 52 0 1 378 378 1 0.0 411
ORI96000390 86.559 372 50 0 1 372 1 372 0.0 411
ORI93020099 86.559 372 50 0 1 372 1 372 0.0 411
ORI93020090 86.559 372 50 0 1 372 1 372 0.0 411
ORI92720076 86.559 372 50 0 1 372 1 372 0.0 411
ORI92330196 86.559 372 50 0 1 372 1 372 0.0 411
ORI92220052 86.559 372 50 0 1 372 1 372 0.0 411
ORI96000364 86.243 378 52 0 1 378 378 1 0.0 411
ORI10030070 86.243 378 52 0 1 378 378 1 0.0 411
ORI10030036 86.243 378 52 0 1 378 378 1 0.0 411
ORI10030030 86.559 372 50 0 1 372 1 372 0.0 411
ORI10020005 86.559 372 50 0 1 372 1 372 0.0 411
ORI10020004 86.559 372 50 0 1 372 1 372 0.0 411
ORI10020002 86.559 372 50 0 1 372 1 372 0.0 411
ORI10020001 86.243 378 52 0 1 378 378 1 0.0 411
ORI96000438 85.979 378 53 0 1 378 378 1 0.0 405
ORI96000437 85.979 378 53 0 1 378 378 1 0.0 405
ORI96000436 85.979 378 53 0 1 378 378 1 0.0 405
ORI96000416 86.29 372 51 0 1 372 1 372 0.0 405
ORI96000409 86.29 372 51 0 1 372 1 372 0.0 405
ORI96000368 86.29 372 51 0 1 372 1 372 0.0 405
ORI93020102 85.979 378 53 0 1 378 378 1 0.0 405
ORI96000367 86.29 372 51 0 1 372 1 372 0.0 405
ORI93020098 86.29 372 51 0 1 372 1 372 0.0 405
ORI93020096 85.979 378 53 0 1 378 378 1 0.0 405
ORI93020093 86.29 372 51 0 1 372 1 372 0.0 405
ORI94030301 86.29 372 51 0 1 372 1 372 0.0 405
ORI94030298 86.29 372 51 0 1 372 1 372 0.0 405
ORI92720079 86.29 372 51 0 1 372 1 372 0.0 405
ORI92720078 86.29 372 51 0 1 372 1 372 0.0 405
ORI92330207 85.979 378 53 0 1 378 378 1 0.0 405
ORI92320058 85.979 378 53 0 1 378 378 1 0.0 405
ORI92220053 86.29 372 51 0 1 372 1 372 0.0 405
ORI10030083 85.979 378 53 0 1 378 378 1 0.0 405
ORI93020104 86.29 372 50 1 1 372 1 371 0.0 403
ORI96000417 86.022 372 52 0 1 372 1 372 0.0 399
ORI96000415 86.022 372 52 0 1 372 1 372 0.0 399
ORI96000410 86.022 372 52 0 1 372 1 372 0.0 399
ORI96000407 86.022 372 52 0 1 372 1 372 0.0 399
ORI96000406 86.022 372 52 0 1 372 1 372 0.0 399
ORI96000404 86.022 372 52 0 1 372 1 372 0.0 399
ORI96000402 86.022 372 52 0 1 372 1 372 0.0 399
ORI95030447 85.714 378 54 0 1 378 378 1 0.0 399
ORI96000365 86.022 372 52 0 1 372 1 372 0.0 399
ORI94030299 86.022 372 52 0 1 372 1 372 0.0 399
ORI50020036 86.022 372 52 0 1 372 1 372 0.0 399
ORI30020033 86.022 372 52 0 1 372 1 372 0.0 399
ORI10020028 86.022 372 52 0 1 372 1 372 0.0 399
ORI10030084 85.714 378 54 0 1 378 378 1 0.0 399
ORI93020103 85.752 379 51 3 1 378 377 1 0.0 398
ORI96000413 85.753 372 53 0 1 372 1 372 0.0 394
ORI96000412 85.753 372 53 0 1 372 1 372 0.0 394
ORI96000403 85.753 372 53 0 1 372 1 372 0.0 394
ORI10020012 85.753 372 53 0 1 372 1 372 0.0 394
ORI94030300 85.484 372 54 0 1 372 1 372 0.0 388
ORI94030323 84.474 380 45 11 7 378 377 4 0.0 363
ORI96000432 84.409 372 47 11 7 372 367 1 0.0 355
ORI96000434 83.289 377 50 9 7 377 374 5 0.0 335
ORI96000393 83.333 378 48 11 7 377 8 377 0.0 335
ORI95020130 83.289 377 50 9 7 377 8 377 0.0 335
ORI93020089 83.289 377 50 9 7 377 8 377 0.0 335
ORI92020049 83.289 377 50 9 7 377 8 377 0.0 335
ORI94030388 83.033 389 44 18 1 377 1 379 0.0 333
ORI93020120 83.989 356 46 8 7 356 367 17 0.0 331
ORI93020111 82.415 381 59 7 1 377 381 5 0.0 326
ORI92520072 82.415 381 59 7 1 377 381 5 0.0 326
ORI95020126 83.24 358 45 13 7 356 367 17 0.0 315
ORI96000429 82.865 356 50 10 7 356 367 17 0.0 309
ORI95020123 82.817 355 52 9 7 356 367 17 0.0 309
ORI96000423 84.192 291 42 4 42 330 331 43 0.0 279
ORI94030317 76.955 243 46 9 89 326 90 327 2.66e-31 130