RefSeq NC_014121.1
Accession number NC_014121.1
DoriC accession number ORI93020120
OriC length 374 nt
OriC AT content 0.566845
The location of oriC region 5286982..5287355 nt
Browse in NCBI
OriC map
OriC sequences
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCAGTAGTTATCCAAAGAACAACGTTGAAGTCGTTTTTGCCCTGTGTATAAAGTCGCGATCTGATCCCAGCTTATACGGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACCCCATGATCTTATTTATGAGATCGGACTTATCCACAAAGGTCCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCAGTAGTTATCCAAAGAACAACGTTGAAGTCGTTTTTGCCCTGTGTATAAAGTCGCGATCTGATCCCAGCTTATACGGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACCCCATGATCTTATTTATGAGATCGGACTTATCCACAAAGGTCCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCAGTAGTTATCCAAAGAACAACGTTGAAGTCGTTTTTGCCCTGTGTATAAAGTCGCGATCTGATCCCAGCTTATACGGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACCCCATGATCTTATTTATGAGATCGGACTTATCCACAAAGGTCCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCAGTAGTTATCCAAAGAACAACGTTGAAGTCGTTTTTGCCCTGTGTATAAAGTCGCGATCTGATCCCAGCTTATACGGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACCCCATGATCTTATTTATGAGATCGGACTTATCCACAAAGGTCCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCAGTAGTTATCCAAAGAACAACGTTGAAGTCGTTTTTGCCCTGTGTATAAAGTCGCGATCTGATCCCAGCTTATACGGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACCCCATGATCTTATTTATGAGATCGGACTTATCCACAAAGGTCCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCAGTAGTTATCCAAAGAACAACGTTGAAGTCGTTTTTGCCCTGTGTATAAAGTCGCGATCTGATCCCAGCTTATACGGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACCCCATGATCTTATTTATGAGATCGGACTTATCCACAAAGGTCCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCAGTAGTTATCCAAAGAACAACGTTGAAGTCGTTTTTGCCCTGTGTATAAAGTCGCGATCTGATCCCAGCTTATACGGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACCCCATGATCTTATTTATGAGATCGGACTTATCCACAAAGGTCCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
miocAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCAGTAGTTATCCAAAGAACAACGTTGAAGTCGTTTTTGCCCTGTGTATAAAGTCGCGATCTGATCCCAGCTTATACGGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACCCCATGATCTTATTTATGAGATCGGACTTATCCACAAAGGTCCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgida
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCAGTAGTTATCCAAAGAACAACGTTGAAGTCGTTTTTGCCCTGTGTATAAAGTCGCGATCTGATCCCAGCTTATACGGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACCCCATGATCTTATTTATGAGATCGGACTTATCCACAAAGGTCCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCAGTAGTTATCCAAAGAACAACGTTGAAGTCGTTTTTGCCCTGTGTATAAAGTCGCGATCTGATCCCAGCTTATACGGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACCCCATGATCTTATTTATGAGATCGGACTTATCCACAAAGGTCCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCAGTAGTTATCCAAAGAACAACGTTGAAGTCGTTTTTGCCCTGTGTATAAAGTCGCGATCTGATCCCAGCTTATACGGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACCCCATGATCTTATTTATGAGATCGGACTTATCCACAAAGGTCCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif ACRGCCCRSGATCC

StartP-valueSite
2729.66e-08CTTCTTTTTAATAGCCCAGGATCCCAATGCTTTC
1241.72e-07CCCAGCTTATACGGGCCAGGATCACCGATCATTC
3232.05e-07AGTAGAATCCACGGCCCGGGCTTCAATCCATTTT
2063.38e-07CTTATCCACAAAGGTCCGCGATCCTAATAAGAGA
1481.68e-06CCGATCATTCACAGCAAACGATCCTTTCTAACCC

Motif AAVAGATC

StartP-valueSite
2242.02e-05CGATCCTAATAAGAGATCACAATAGAAC
2394.60e-05ATCACAATAGAACAGATCTCTAAATAAA
2559.44e-05TCTCTAAATAAAAAGATCTTCTTTTTAA
1851.11e-04GATCTTATTTATGAGATCGGACTTATCC
111.32e-04AGATCGCGCGAACAGATGTGGATAACTC

Motif CGCGMG

StartP-valueSite
59.84e-05AGATCGCGCGAACAGATGTG
3592.23e-04TACCGCTTTACGCGAGGCAGACCACC
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI93020120 100.0 374 0 0 1 374 1 374 0.0 691
ORI96000429 97.594 374 9 0 1 374 1 374 0.0 641
ORI96000432 94.667 375 18 2 1 374 1 374 0.0 580
ORI95020123 93.899 377 17 5 1 374 1 374 0.0 564
ORI95020126 93.316 374 25 0 1 374 1 374 0.0 553
ORI90020046 86.721 369 42 6 3 368 3 367 0.0 403
ORI93030277 84.14 372 48 10 1 367 7 372 0.0 350
ORI96000434 84.167 360 51 5 17 374 26 381 0.0 344
ORI95020130 84.167 360 51 5 17 374 356 1 0.0 344
ORI93020089 84.167 360 51 5 17 374 356 1 0.0 344
ORI92020049 84.167 360 51 5 17 374 356 1 0.0 344
ORI96000393 83.889 360 52 5 17 374 356 1 0.0 339
ORI96000399 83.333 372 51 8 1 367 372 7 0.0 333
ORI95030441 83.288 371 53 8 1 367 25 390 0.0 333
ORI94030400 83.243 370 55 7 1 367 372 7 0.0 333
ORI92720083 83.288 371 53 8 1 367 372 7 0.0 333
ORI92520073 83.288 371 53 8 1 367 372 7 0.0 333
ORI92520068 83.333 372 51 8 1 367 372 7 0.0 333
ORI92520066 83.333 372 51 8 1 367 372 7 0.0 333
ORI92520065 83.333 372 51 8 1 367 372 7 0.0 333
ORI92520064 83.288 371 53 8 1 367 372 7 0.0 333
ORI92520067 83.989 356 46 8 17 367 356 7 0.0 331
ORI10020021 83.989 356 46 8 17 367 356 7 0.0 331
ORI95030469 83.019 371 54 8 1 367 372 7 0.0 327
ORI95030444 83.019 371 54 8 1 367 372 7 0.0 327
ORI95020132 83.019 371 54 8 1 367 372 7 0.0 327
ORI95030443 83.019 371 54 8 1 367 372 7 0.0 327
ORI95030442 83.019 371 54 8 1 367 372 7 0.0 327
ORI95020131 83.019 371 54 8 1 367 372 7 0.0 327
ORI95020129 83.019 371 54 7 1 367 7 372 0.0 327
ORI95030436 83.019 371 54 8 1 367 372 7 0.0 327
ORI92520071 83.019 371 54 8 1 367 7 372 0.0 327
ORI92230183 83.019 371 54 8 1 367 372 7 0.0 327
ORI10020023 83.019 371 54 8 1 367 372 7 0.0 327
ORI10020015 83.019 371 54 7 1 367 7 372 0.0 327
ORI10020010 83.019 371 54 7 1 367 7 372 0.0 327
ORI10020009 83.019 371 54 8 1 367 372 7 0.0 327
ORI92520070 82.749 371 55 8 1 367 372 7 0.0 322
ORI94030388 82.873 362 53 9 17 374 357 1 0.0 316
ORI96000401 82.105 380 54 13 1 374 372 1 0.0 313
ORI94030303 82.105 380 54 13 1 374 372 1 0.0 313
ORI92230179 82.385 369 55 9 3 367 9 371 0.0 313
ORI93020111 82.548 361 55 7 17 374 26 381 0.0 311
ORI92520072 82.548 361 55 7 17 374 26 381 0.0 311
ORI92230170 82.258 372 55 10 1 367 372 7 0.0 311
ORI96000406 81.746 378 59 9 1 374 372 1 0.0 307
ORI96000404 81.746 378 59 9 1 374 372 1 0.0 307
ORI96000402 81.746 378 59 9 1 374 372 1 0.0 307
ORI96000390 81.746 378 59 9 1 374 372 1 0.0 307
ORI96000365 81.746 378 59 9 1 374 372 1 0.0 307
ORI94030299 81.746 378 59 9 1 374 372 1 0.0 307
ORI50020036 81.746 378 59 9 1 374 372 1 0.0 307
ORI10020028 81.746 378 59 9 1 374 372 1 0.0 307
ORI10030083 81.746 378 59 9 1 374 7 378 0.0 307
ORI10030036 81.746 378 59 9 1 374 7 378 0.0 307
ORI10030030 81.746 378 59 9 1 374 372 1 0.0 307
ORI30020034 82.32 362 54 9 17 374 437 82 0.0 305
ORI96000414 81.481 378 60 9 1 374 372 1 0.0 302
ORI96000411 81.481 378 60 9 1 374 372 1 0.0 302
ORI96000410 81.481 378 60 9 1 374 372 1 0.0 302
ORI96000408 81.481 378 60 9 1 374 372 1 0.0 302
ORI96000405 81.481 378 60 9 1 374 372 1 0.0 302
ORI96000400 81.481 378 60 9 1 374 7 378 0.0 302
ORI93020113 81.481 378 60 9 1 374 372 1 0.0 302
ORI96000368 81.481 378 60 9 1 374 372 1 0.0 302
ORI93020090 81.481 378 60 9 1 374 372 1 0.0 302
ORI94030302 81.481 378 60 9 1 374 372 1 0.0 302
ORI92720080 81.481 378 60 9 1 374 372 1 0.0 302
ORI92320059 81.481 378 60 9 1 374 372 1 0.0 302
ORI92330196 81.481 378 60 9 1 374 372 1 0.0 302
ORI30020033 81.481 378 60 9 1 374 372 1 0.0 302
ORI96000364 81.481 378 60 9 1 374 7 378 0.0 302
ORI10030070 81.53 379 58 11 1 374 7 378 0.0 302
ORI10020002 81.481 378 60 9 1 374 372 1 0.0 302
ORI10020001 81.481 378 60 9 1 374 7 378 0.0 302
ORI93020104 81.481 378 59 10 1 374 371 1 0.0 300
ORI96000438 81.217 378 61 9 1 374 7 378 0.0 296
ORI96000437 81.217 378 61 9 1 374 7 378 0.0 296
ORI96000436 81.217 378 61 9 1 374 7 378 0.0 296
ORI96000422 81.217 378 61 9 1 374 372 1 0.0 296
ORI96000416 81.217 378 61 9 1 374 372 1 0.0 296
ORI96000413 81.217 378 61 9 1 374 372 1 0.0 296
ORI96000412 81.217 378 61 9 1 374 372 1 0.0 296
ORI96000409 81.217 378 61 9 1 374 372 1 0.0 296
ORI96000403 81.217 378 61 9 1 374 372 1 0.0 296
ORI94030323 81.316 380 58 9 1 373 10 383 0.0 296
ORI93020102 81.217 378 61 9 1 374 7 378 0.0 296
ORI93020099 81.217 378 61 9 1 374 372 1 0.0 296
ORI96000367 81.217 378 61 9 1 374 372 1 0.0 296
ORI93020098 81.217 378 61 9 1 374 372 1 0.0 296
ORI93020096 81.217 378 61 9 1 374 7 378 0.0 296
ORI93020093 81.217 378 61 9 1 374 372 1 0.0 296
ORI94030301 81.217 378 61 9 1 374 372 1 0.0 296
ORI94030298 81.217 378 61 9 1 374 372 1 0.0 296
ORI92720078 81.217 378 61 9 1 374 372 1 0.0 296
ORI92720076 81.217 378 61 9 1 374 372 1 0.0 296
ORI92330207 81.217 378 61 9 1 374 7 378 0.0 296
ORI92320058 81.217 378 61 9 1 374 7 378 0.0 296
ORI92220053 81.217 378 61 9 1 374 372 1 0.0 296
ORI10020012 81.217 378 61 9 1 374 372 1 0.0 296
ORI10020005 81.217 378 61 9 1 374 372 1 0.0 296
ORI10020004 81.217 378 61 9 1 374 372 1 0.0 296
ORI93020103 81.51 384 48 17 1 374 7 377 0.0 294
ORI96000417 80.952 378 62 9 1 374 372 1 0.0 291
ORI96000415 80.952 378 62 9 1 374 372 1 0.0 291
ORI96000407 80.952 378 62 9 1 374 372 1 0.0 291
ORI95030447 80.952 378 62 9 1 374 7 378 0.0 291
ORI94030300 80.952 378 62 9 1 374 372 1 0.0 291
ORI92720079 80.952 378 62 9 1 374 372 1 0.0 291
ORI92220052 80.952 378 62 9 1 374 372 1 0.0 291
ORI10030084 81.215 362 58 9 17 374 23 378 0.0 283
ORI96000423 80.186 323 49 14 17 332 17 331 0.0 228
ORI80020043 77.177 333 53 18 1 322 371 51 4.34403e-44 172
ORI94030361 76.737 331 58 15 1 322 371 51 1.99965e-42 167
ORI96020517 77.419 279 48 12 1 273 10 279 5.61e-38 152