RefSeq NC_011750.1
Accession number NC_011750.1
DoriC accession number ORI94030302
OriC length 378 nt
OriC AT content 0.560847
The location of oriC region 4529104..4529481 nt
Browse in NCBI
OriC map
OriC sequences
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTGGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTGGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTGGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTGGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTGGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTGGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTGGATCGCACGATCTGTATACmioC
gidaGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTGGATCGCACGATCTGTATACmioc
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTGGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTGGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTGGATCGCACGATCTGTATACmioC
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif GAAHRABCKGKGWTC

StartP-valueSite
2262.39e-08CATTAACTGTGAATGATCGGTGATCCTGGACCGTA
795.48e-08GTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTA
2944.71e-07CTCAAAAACTGAACAACCGTTGTTCTTTGGATAAC
2486.46e-07ATCCTGGACCGTATAAGCTGGGATCAGAATGAGGG
3641.78e-06ACAGTGGATCGCACGATCTGTATAC

Motif CNGTGGAT

StartP-valueSite
481.20e-05GAAGCCCGGGCCGTGGATTCTACTCAAC
3556.05e-05GAGTTATCCACAGTGGATCGCACGATCT
1676.05e-05TCGCACTGCCCTGTGGATAACAAGGATC
3229.11e-05GGATAACTACCGGTTGATCCAAGCTTCC

Motif ARGATC

StartP-valueSite
2112.56e-04CAACCTGGAAAGGATCATTAACTGTG
1792.56e-04GTGGATAACAAGGATCCGGCTTTTAA
1532.56e-04ATCTCTTATTAGGATCGCACTGCCCT
1935.58e-04TCCGGCTTTTAAGATCAACAACCTGG
1095.58e-04TATTAAAAAGAAGATCTATTTATTTA
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI96000411 100.0 378 0 0 1 378 1 378 0.0 699
ORI94030302 100.0 378 0 0 1 378 1 378 0.0 699
ORI92320059 100.0 378 0 0 1 378 1 378 0.0 699
ORI96000438 99.471 378 2 0 1 378 378 1 0.0 688
ORI96000437 99.471 378 2 0 1 378 378 1 0.0 688
ORI96000436 99.471 378 2 0 1 378 378 1 0.0 688
ORI96000416 99.471 378 2 0 1 378 1 378 0.0 688
ORI96000414 99.471 378 2 0 1 378 1 378 0.0 688
ORI96000409 99.471 378 2 0 1 378 1 378 0.0 688
ORI96000408 99.471 378 2 0 1 378 1 378 0.0 688
ORI96000405 99.471 378 2 0 1 378 1 378 0.0 688
ORI96000400 99.471 378 2 0 1 378 378 1 0.0 688
ORI93020113 99.471 378 2 0 1 378 1 378 0.0 688
ORI93020102 99.471 378 2 0 1 378 378 1 0.0 688
ORI96000367 99.471 378 2 0 1 378 1 378 0.0 688
ORI93020098 99.471 378 2 0 1 378 1 378 0.0 688
ORI93020096 99.471 378 2 0 1 378 378 1 0.0 688
ORI93020093 99.471 378 2 0 1 378 1 378 0.0 688
ORI93020090 99.471 378 2 0 1 378 1 378 0.0 688
ORI94030301 99.471 378 2 0 1 378 1 378 0.0 688
ORI94030298 99.471 378 2 0 1 378 1 378 0.0 688
ORI92720080 99.471 378 2 0 1 378 1 378 0.0 688
ORI92720079 99.471 378 2 0 1 378 1 378 0.0 688
ORI92720078 99.471 378 2 0 1 378 1 378 0.0 688
ORI92330207 99.471 378 2 0 1 378 378 1 0.0 688
ORI92330196 99.471 378 2 0 1 378 1 378 0.0 688
ORI92320058 99.471 378 2 0 1 378 378 1 0.0 688
ORI92220053 99.471 378 2 0 1 378 1 378 0.0 688
ORI96000364 99.471 378 2 0 1 378 378 1 0.0 688
ORI10020002 99.471 378 2 0 1 378 1 378 0.0 688
ORI10020001 99.471 378 2 0 1 378 378 1 0.0 688
ORI96000422 99.206 378 3 0 1 378 1 378 0.0 682
ORI96000417 99.206 378 3 0 1 378 1 378 0.0 682
ORI96000415 99.206 378 3 0 1 378 1 378 0.0 682
ORI96000410 99.206 378 3 0 1 378 1 378 0.0 682
ORI96000407 99.206 378 3 0 1 378 1 378 0.0 682
ORI96000406 99.206 378 3 0 1 378 1 378 0.0 682
ORI96000401 99.206 378 3 0 1 378 1 378 0.0 682
ORI95030447 99.206 378 3 0 1 378 378 1 0.0 682
ORI96000368 99.206 378 3 0 1 378 1 378 0.0 682
ORI93020099 99.206 378 3 0 1 378 1 378 0.0 682
ORI96000365 99.206 378 3 0 1 378 1 378 0.0 682
ORI94030303 99.206 378 3 0 1 378 1 378 0.0 682
ORI92720076 99.206 378 3 0 1 378 1 378 0.0 682
ORI92220052 99.206 378 3 0 1 378 1 378 0.0 682
ORI30020033 99.206 378 3 0 1 378 1 378 0.0 682
ORI10030083 99.206 378 3 0 1 378 378 1 0.0 682
ORI10030070 99.206 378 3 0 1 378 378 1 0.0 682
ORI10020005 99.206 378 3 0 1 378 1 378 0.0 682
ORI10020004 99.206 378 3 0 1 378 1 378 0.0 682
ORI93020104 99.206 378 2 1 1 378 1 377 0.0 680
ORI96000413 98.942 378 4 0 1 378 1 378 0.0 676
ORI96000412 98.942 378 4 0 1 378 1 378 0.0 676
ORI96000404 98.942 378 4 0 1 378 1 378 0.0 676
ORI96000403 98.942 378 4 0 1 378 1 378 0.0 676
ORI96000402 98.942 378 4 0 1 378 1 378 0.0 676
ORI94030299 98.942 378 4 0 1 378 1 378 0.0 676
ORI50020036 98.942 378 4 0 1 378 1 378 0.0 676
ORI10020028 98.942 378 4 0 1 378 1 378 0.0 676
ORI10020012 98.942 378 4 0 1 378 1 378 0.0 676
ORI93020103 98.942 378 3 1 1 378 377 1 0.0 675
ORI96000390 98.677 378 5 0 1 378 1 378 0.0 671
ORI94030300 98.677 378 5 0 1 378 1 378 0.0 671
ORI10030084 98.677 378 5 0 1 378 378 1 0.0 671
ORI10030036 98.677 378 5 0 1 378 378 1 0.0 671
ORI10030030 98.677 378 5 0 1 378 1 378 0.0 671
ORI30020034 98.413 378 6 0 1 378 82 459 0.0 665
ORI93030277 90.0 380 34 4 1 378 378 1 0.0 488
ORI92230170 89.008 373 39 2 1 372 1 372 0.0 460
ORI96000399 87.366 372 47 0 1 372 1 372 0.0 427
ORI92520066 87.366 372 47 0 1 372 1 372 0.0 427
ORI92520065 87.366 372 47 0 1 372 1 372 0.0 427
ORI92520068 87.097 372 48 0 1 372 1 372 0.0 422
ORI95030469 86.828 372 49 0 1 372 1 372 0.0 416
ORI95030444 86.828 372 49 0 1 372 1 372 0.0 416
ORI95020132 86.828 372 49 0 1 372 1 372 0.0 416
ORI95030443 86.828 372 49 0 1 372 1 372 0.0 416
ORI95030442 86.828 372 49 0 1 372 1 372 0.0 416
ORI95020131 86.828 372 49 0 1 372 1 372 0.0 416
ORI95030441 86.508 378 51 0 1 378 396 19 0.0 416
ORI95030436 86.828 372 49 0 1 372 1 372 0.0 416
ORI92720083 86.828 372 49 0 1 372 1 372 0.0 416
ORI92520073 86.828 372 49 0 1 372 1 372 0.0 416
ORI92520067 86.828 372 49 0 1 372 1 372 0.0 416
ORI92520064 86.828 372 49 0 1 372 1 372 0.0 416
ORI10020021 86.828 372 49 0 1 372 1 372 0.0 416
ORI10020009 86.828 372 49 0 1 372 1 372 0.0 416
ORI94030323 86.737 377 42 8 7 378 377 4 0.0 412
ORI94030400 86.595 373 48 2 1 372 1 372 0.0 411
ORI92520071 86.243 378 52 0 1 378 378 1 0.0 411
ORI92230183 86.559 372 50 0 1 372 1 372 0.0 411
ORI10020023 86.559 372 50 0 1 372 1 372 0.0 411
ORI95020129 86.016 379 51 2 1 378 378 1 0.0 405
ORI92520070 86.29 372 51 0 1 372 1 372 0.0 405
ORI10020015 86.016 379 51 2 1 378 378 1 0.0 405
ORI10020010 86.016 379 51 2 1 378 378 1 0.0 405
ORI96000434 85.864 382 40 11 1 375 381 7 0.0 394
ORI95020130 86.016 379 39 11 1 372 1 372 0.0 394
ORI93020089 86.016 379 39 11 1 372 1 372 0.0 394
ORI92230179 86.096 374 43 8 1 370 377 9 0.0 394
ORI92020049 86.016 379 39 11 1 372 1 372 0.0 394
ORI96000393 85.752 379 40 11 1 372 1 372 0.0 388
ORI94030388 86.264 364 37 13 1 357 1 358 0.0 383
ORI92520072 85.302 381 44 11 1 375 381 7 0.0 383
ORI93020111 85.039 381 45 11 1 375 381 7 0.0 377
ORI96000432 84.169 379 48 12 1 372 374 1 0.0 357
ORI95020123 81.432 377 62 8 1 372 374 1 0.0 302
ORI93020120 81.481 378 60 9 1 372 374 1 0.0 302
ORI96000429 80.952 378 62 10 1 372 374 1 0.0 291
ORI95020126 80.688 378 63 10 1 372 374 1 0.0 285
ORI96000423 80.822 292 50 5 42 330 331 43 0.0 224
ORI93020094 77.366 243 44 10 89 326 289 53 2.06e-32 134
ORI94030322 75.17 294 51 17 45 326 390 107 5.76e-28 119