RefSeq NC_018079.1
Accession number NC_018079.1
DoriC accession number ORI96000429
OriC length 374 nt
OriC AT content 0.561497
The location of oriC region 4938838..4939211 nt
Browse in NCBI
OriC map
OriC sequences
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCAGTAGTTATCCAAAGGACAACGGCGAAGTCGTTTTTGGCCTGTGCATAAAGTCGCGATCTGATCCCAGCTTATACGGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACTTCATGATCTTCTTTATGAGATCGGACTTATCCACAAAGGTCCTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCAGTAGTTATCCAAAGGACAACGGCGAAGTCGTTTTTGGCCTGTGCATAAAGTCGCGATCTGATCCCAGCTTATACGGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACTTCATGATCTTCTTTATGAGATCGGACTTATCCACAAAGGTCCTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCAGTAGTTATCCAAAGGACAACGGCGAAGTCGTTTTTGGCCTGTGCATAAAGTCGCGATCTGATCCCAGCTTATACGGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACTTCATGATCTTCTTTATGAGATCGGACTTATCCACAAAGGTCCTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCAGTAGTTATCCAAAGGACAACGGCGAAGTCGTTTTTGGCCTGTGCATAAAGTCGCGATCTGATCCCAGCTTATACGGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACTTCATGATCTTCTTTATGAGATCGGACTTATCCACAAAGGTCCTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCAGTAGTTATCCAAAGGACAACGGCGAAGTCGTTTTTGGCCTGTGCATAAAGTCGCGATCTGATCCCAGCTTATACGGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACTTCATGATCTTCTTTATGAGATCGGACTTATCCACAAAGGTCCTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCAGTAGTTATCCAAAGGACAACGGCGAAGTCGTTTTTGGCCTGTGCATAAAGTCGCGATCTGATCCCAGCTTATACGGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACTTCATGATCTTCTTTATGAGATCGGACTTATCCACAAAGGTCCTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCAGTAGTTATCCAAAGGACAACGGCGAAGTCGTTTTTGGCCTGTGCATAAAGTCGCGATCTGATCCCAGCTTATACGGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACTTCATGATCTTCTTTATGAGATCGGACTTATCCACAAAGGTCCTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
miocAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCAGTAGTTATCCAAAGGACAACGGCGAAGTCGTTTTTGGCCTGTGCATAAAGTCGCGATCTGATCCCAGCTTATACGGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACTTCATGATCTTCTTTATGAGATCGGACTTATCCACAAAGGTCCTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgida
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCAGTAGTTATCCAAAGGACAACGGCGAAGTCGTTTTTGGCCTGTGCATAAAGTCGCGATCTGATCCCAGCTTATACGGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACTTCATGATCTTCTTTATGAGATCGGACTTATCCACAAAGGTCCTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCAGTAGTTATCCAAAGGACAACGGCGAAGTCGTTTTTGGCCTGTGCATAAAGTCGCGATCTGATCCCAGCTTATACGGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACTTCATGATCTTCTTTATGAGATCGGACTTATCCACAAAGGTCCTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCAGTAGTTATCCAAAGGACAACGGCGAAGTCGTTTTTGGCCTGTGCATAAAGTCGCGATCTGATCCCAGCTTATACGGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACTTCATGATCTTCTTTATGAGATCGGACTTATCCACAAAGGTCCTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif ACRGCCCASGATCC

StartP-valueSite
2728.58e-08CTTCTTTTTAATAGCCCAGGATCCCAATGCTTTC
1241.70e-07CCCAGCTTATACGGGCCAGGATCACCGATCATTC
3234.63e-07AGTAGAATCCACGGCCCGGGCTTCAATCCATTTT
2061.06e-06CTTATCCACAAAGGTCCTCGATCCTAATAAGAGA
1481.66e-06CCGATCATTCACAGCAAACGATCCTTTCTAACTT

Motif AAVAGATC

StartP-valueSite
2242.01e-05CGATCCTAATAAGAGATCACAATAGAAC
2394.50e-05ATCACAATAGAACAGATCTCTAAATAAA
2559.23e-05TCTCTAAATAAAAAGATCTTCTTTTTAA
1851.30e-04GATCTTCTTTATGAGATCGGACTTATCC
111.30e-04AGATCGCGCGAACAGATGTGGATAACTC

Motif CGCGMG

StartP-valueSite
51.08e-04AGATCGCGCGAACAGATGTG
3592.42e-04TACCGCTTTACGCGAGGCAGACCACC
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI96000429 100.0 374 0 0 1 374 1 374 0.0 691
ORI93020120 97.594 374 9 0 1 374 1 374 0.0 641
ORI95020123 94.681 376 16 3 1 374 1 374 0.0 580
ORI95020126 93.85 374 23 0 1 374 1 374 0.0 564
ORI96000432 93.6 375 22 2 1 374 1 374 0.0 558
ORI90020046 86.413 368 45 4 3 368 3 367 0.0 398
ORI96000434 84.53 362 46 9 17 374 26 381 0.0 350
ORI95020130 84.53 362 46 9 17 374 356 1 0.0 350
ORI93020089 84.53 362 46 9 17 374 356 1 0.0 350
ORI92020049 84.53 362 46 9 17 374 356 1 0.0 350
ORI96000393 84.254 362 47 9 17 374 356 1 0.0 344
ORI93030277 83.602 372 50 10 1 367 7 372 0.0 339
ORI94030400 83.378 373 49 12 1 367 372 7 0.0 333
ORI94030388 83.196 363 50 10 17 374 357 1 0.0 322
ORI96000399 82.258 372 55 10 1 367 372 7 0.0 311
ORI95030441 82.258 372 55 10 1 367 25 390 0.0 311
ORI93020111 82.597 362 53 9 17 374 26 381 0.0 311
ORI92720083 82.258 372 55 10 1 367 372 7 0.0 311
ORI92520073 82.258 372 55 10 1 367 372 7 0.0 311
ORI92520072 82.597 362 53 9 17 374 26 381 0.0 311
ORI92520068 82.258 372 55 10 1 367 372 7 0.0 311
ORI92520065 82.258 372 55 10 1 367 372 7 0.0 311
ORI92520064 82.258 372 55 10 1 367 372 7 0.0 311
ORI92230183 82.258 372 55 10 1 367 372 7 0.0 311
ORI92230170 82.21 371 57 8 1 367 372 7 0.0 311
ORI92520067 82.865 356 50 10 17 367 356 7 0.0 309
ORI10020021 82.865 356 50 10 17 367 356 7 0.0 309
ORI95030469 81.989 372 56 10 1 367 372 7 0.0 305
ORI95030444 81.989 372 56 10 1 367 372 7 0.0 305
ORI95020132 81.989 372 56 10 1 367 372 7 0.0 305
ORI95030443 81.989 372 56 10 1 367 372 7 0.0 305
ORI95030442 81.989 372 56 10 1 367 372 7 0.0 305
ORI95020131 81.989 372 56 10 1 367 372 7 0.0 305
ORI95020129 81.989 372 56 10 1 367 7 372 0.0 305
ORI95030436 81.989 372 56 10 1 367 372 7 0.0 305
ORI92520071 81.989 372 56 10 1 367 7 372 0.0 305
ORI92520066 81.941 371 58 8 1 367 372 7 0.0 305
ORI10020023 81.989 372 56 10 1 367 372 7 0.0 305
ORI10020015 81.989 372 56 10 1 367 7 372 0.0 305
ORI10020010 81.989 372 56 10 1 367 7 372 0.0 305
ORI10020009 81.989 372 56 10 1 367 372 7 0.0 305
ORI96000401 81.579 380 56 13 1 374 372 1 0.0 302
ORI94030303 81.579 380 56 13 1 374 372 1 0.0 302
ORI92230179 81.941 371 53 12 3 367 9 371 0.0 302
ORI92520070 81.72 372 57 10 1 367 372 7 0.0 300
ORI96000404 81.217 378 61 10 1 374 372 1 0.0 296
ORI96000402 81.217 378 61 10 1 374 372 1 0.0 296
ORI96000390 81.266 379 59 11 1 374 372 1 0.0 296
ORI94030299 81.217 378 61 10 1 374 372 1 0.0 296
ORI50020036 81.217 378 61 10 1 374 372 1 0.0 296
ORI10020028 81.217 378 61 10 1 374 372 1 0.0 296
ORI10030036 81.266 379 59 11 1 374 7 378 0.0 296
ORI10030030 81.266 379 59 11 1 374 372 1 0.0 296
ORI30020034 81.818 363 54 11 17 374 437 82 0.0 294
ORI96000414 81.003 379 60 11 1 374 372 1 0.0 291
ORI96000411 80.952 378 62 10 1 374 372 1 0.0 291
ORI96000406 80.902 377 64 8 1 374 372 1 0.0 291
ORI93020113 81.003 379 60 11 1 374 372 1 0.0 291
ORI96000365 80.902 377 64 8 1 374 372 1 0.0 291
ORI94030302 80.952 378 62 10 1 374 372 1 0.0 291
ORI92720080 81.003 379 60 11 1 374 372 1 0.0 291
ORI92320059 80.952 378 62 10 1 374 372 1 0.0 291
ORI10030083 81.003 379 60 11 1 374 7 378 0.0 291
ORI10030070 81.003 379 60 12 1 374 7 378 0.0 291
ORI96000438 80.688 378 63 10 1 374 7 378 0.0 285
ORI96000437 80.688 378 63 10 1 374 7 378 0.0 285
ORI96000436 80.688 378 63 10 1 374 7 378 0.0 285
ORI96000422 80.739 379 61 11 1 374 372 1 0.0 285
ORI96000416 80.739 379 61 12 1 374 372 1 0.0 285
ORI96000410 80.739 379 61 11 1 374 372 1 0.0 285
ORI96000409 80.739 379 61 12 1 374 372 1 0.0 285
ORI96000408 80.739 379 61 11 1 374 372 1 0.0 285
ORI96000405 80.739 379 61 11 1 374 372 1 0.0 285
ORI96000400 80.739 379 61 11 1 374 7 378 0.0 285
ORI96000368 80.739 379 61 11 1 374 372 1 0.0 285
ORI93020102 80.739 379 61 12 1 374 7 378 0.0 285
ORI93020099 80.739 379 61 11 1 374 372 1 0.0 285
ORI96000367 80.739 379 61 12 1 374 372 1 0.0 285
ORI93020098 80.739 379 61 12 1 374 372 1 0.0 285
ORI93020096 80.739 379 61 12 1 374 7 378 0.0 285
ORI93020093 80.739 379 61 12 1 374 372 1 0.0 285
ORI93020090 80.739 379 61 11 1 374 372 1 0.0 285
ORI94030301 80.688 378 63 10 1 374 372 1 0.0 285
ORI94030298 80.739 379 61 12 1 374 372 1 0.0 285
ORI92720078 80.688 378 63 10 1 374 372 1 0.0 285
ORI92720076 80.739 379 61 11 1 374 372 1 0.0 285
ORI92330207 80.739 379 61 12 1 374 7 378 0.0 285
ORI92330196 80.739 379 61 11 1 374 372 1 0.0 285
ORI92320058 80.739 379 61 12 1 374 7 378 0.0 285
ORI92220053 80.688 378 63 10 1 374 372 1 0.0 285
ORI30020033 80.739 379 61 11 1 374 372 1 0.0 285
ORI96000364 80.739 379 61 11 1 374 7 378 0.0 285
ORI10020005 80.739 379 61 11 1 374 372 1 0.0 285
ORI10020004 80.739 379 61 11 1 374 372 1 0.0 285
ORI10020002 80.739 379 61 11 1 374 372 1 0.0 285
ORI10020001 80.739 379 61 11 1 374 7 378 0.0 285
ORI93020104 80.688 378 62 11 1 374 371 1 0.0 283
ORI96000417 80.475 379 62 12 1 374 372 1 0.0 279
ORI96000415 80.475 379 62 12 1 374 372 1 0.0 279
ORI96000413 80.475 379 62 11 1 374 372 1 0.0 279
ORI96000412 80.475 379 62 11 1 374 372 1 0.0 279
ORI96000407 80.475 379 62 12 1 374 372 1 0.0 279
ORI96000403 80.475 379 62 11 1 374 372 1 0.0 279
ORI95030447 80.475 379 62 12 1 374 7 378 0.0 279
ORI94030323 80.679 383 55 14 1 373 10 383 0.0 279
ORI94030300 80.679 383 54 14 1 374 372 1 0.0 279
ORI92720079 80.423 378 64 10 1 374 372 1 0.0 279
ORI92220052 80.475 379 62 12 1 374 372 1 0.0 279
ORI10020012 80.475 379 62 11 1 374 372 1 0.0 279
ORI93020103 80.423 378 63 11 1 374 7 377 0.0 278
ORI10030084 80.716 363 58 12 17 374 23 378 0.0 272
ORI96000423 78.963 328 44 21 17 332 17 331 0.0 200
ORI80020043 76.807 332 56 18 1 322 371 51 1.99965e-42 167
ORI94030361 79.253 241 35 12 89 322 283 51 1.56e-38 154
ORI96020517 80.952 189 25 9 89 273 98 279 4.37e-34 139