RefSeq NC_011149.1
Accession number NC_011149.1
DoriC accession number ORI92520068
OriC length 378 nt
OriC AT content 0.555556
The location of oriC region 4001455..4001832 nt
Browse in NCBI
OriC map
OriC sequences
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
gidaGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioc
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif CDRGCKGTGGAT

StartP-valueSite
442.43e-07GATTGAAGCCCGGGCGGTGGATTCTACTCAAC
1635.77e-07AGGATCGCACCAGGCTGTGGATAACCCGGATC
2181.37e-06GAAAGGATCACTAGCTGTGAATGATCGGTGAT
3182.64e-06CTTTGGATAACTACCGGTTGATCCAAGCTTTC

Motif GSCYCGBRWWMSSBGSKRTBAAAAHG

StartP-valueSite
85.55e-13GGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCC
2435.82e-12CGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATA
839.90e-12GATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTT

Motif GGATCGCAC

StartP-valueSite
3592.62e-06TATCCACAATGGATCGCACGATCTTTACA
1542.62e-06TCTCTTATTAGGATCGCACCAGGCTGTGG
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI92520068 100.0 378 0 0 1 378 1 378 0.0 699
ORI96000399 99.735 378 1 0 1 378 1 378 0.0 693
ORI95030441 99.735 378 1 0 1 378 396 19 0.0 693
ORI92720083 99.735 378 1 0 1 378 1 378 0.0 693
ORI92520073 99.735 378 1 0 1 378 1 378 0.0 693
ORI92520067 99.735 378 1 0 1 378 1 378 0.0 693
ORI92520066 99.735 378 1 0 1 378 1 378 0.0 693
ORI92520065 99.735 378 1 0 1 378 1 378 0.0 693
ORI92520064 99.735 378 1 0 1 378 1 378 0.0 693
ORI10020021 99.735 378 1 0 1 378 1 378 0.0 693
ORI95020132 99.471 378 2 0 1 378 1 378 0.0 688
ORI92520071 99.471 378 2 0 1 378 378 1 0.0 688
ORI92230183 99.471 378 2 0 1 378 1 378 0.0 688
ORI10020023 99.471 378 2 0 1 378 1 378 0.0 688
ORI10020009 99.471 378 2 0 1 378 1 378 0.0 688
ORI95030469 99.469 377 2 0 1 377 1 377 0.0 686
ORI95030444 99.469 377 2 0 1 377 1 377 0.0 686
ORI95030443 99.469 377 2 0 1 377 1 377 0.0 686
ORI95030442 99.469 377 2 0 1 377 1 377 0.0 686
ORI95020131 99.469 377 2 0 1 377 1 377 0.0 686
ORI95030436 99.469 377 2 0 1 377 1 377 0.0 686
ORI92520070 99.206 378 3 0 1 378 1 378 0.0 682
ORI95020129 98.942 378 4 0 1 378 378 1 0.0 676
ORI10020015 98.942 378 4 0 1 378 378 1 0.0 676
ORI10020010 98.942 378 4 0 1 378 378 1 0.0 676
ORI94030400 94.444 378 21 0 1 378 1 378 0.0 582
ORI92230179 92.593 378 27 1 1 378 377 1 0.0 542
ORI93030277 91.293 379 31 2 1 378 378 1 0.0 516
ORI96000401 87.634 372 46 0 1 372 1 372 0.0 433
ORI94030303 87.634 372 46 0 1 372 1 372 0.0 433
ORI92230170 87.766 376 38 5 1 372 1 372 0.0 433
ORI96000414 87.097 372 48 0 1 372 1 372 0.0 422
ORI96000411 87.097 372 48 0 1 372 1 372 0.0 422
ORI93020113 87.097 372 48 0 1 372 1 372 0.0 422
ORI94030302 87.097 372 48 0 1 372 1 372 0.0 422
ORI92720080 87.097 372 48 0 1 372 1 372 0.0 422
ORI92320059 87.097 372 48 0 1 372 1 372 0.0 422
ORI96000422 86.828 372 49 0 1 372 1 372 0.0 416
ORI96000408 86.828 372 49 0 1 372 1 372 0.0 416
ORI96000405 86.828 372 49 0 1 372 1 372 0.0 416
ORI96000400 86.508 378 51 0 1 378 378 1 0.0 416
ORI96000390 86.828 372 49 0 1 372 1 372 0.0 416
ORI93020099 86.828 372 49 0 1 372 1 372 0.0 416
ORI93020090 86.828 372 49 0 1 372 1 372 0.0 416
ORI92720076 86.828 372 49 0 1 372 1 372 0.0 416
ORI92330196 86.828 372 49 0 1 372 1 372 0.0 416
ORI92220052 86.828 372 49 0 1 372 1 372 0.0 416
ORI96000364 86.508 378 51 0 1 378 378 1 0.0 416
ORI10030070 86.508 378 51 0 1 378 378 1 0.0 416
ORI10030036 86.508 378 51 0 1 378 378 1 0.0 416
ORI10030030 86.828 372 49 0 1 372 1 372 0.0 416
ORI10020005 86.828 372 49 0 1 372 1 372 0.0 416
ORI10020004 86.828 372 49 0 1 372 1 372 0.0 416
ORI10020002 86.828 372 49 0 1 372 1 372 0.0 416
ORI10020001 86.508 378 51 0 1 378 378 1 0.0 416
ORI96000438 86.243 378 52 0 1 378 378 1 0.0 411
ORI96000437 86.243 378 52 0 1 378 378 1 0.0 411
ORI96000436 86.243 378 52 0 1 378 378 1 0.0 411
ORI96000416 86.559 372 50 0 1 372 1 372 0.0 411
ORI96000409 86.559 372 50 0 1 372 1 372 0.0 411
ORI96000368 86.559 372 50 0 1 372 1 372 0.0 411
ORI93020102 86.243 378 52 0 1 378 378 1 0.0 411
ORI96000367 86.559 372 50 0 1 372 1 372 0.0 411
ORI93020098 86.559 372 50 0 1 372 1 372 0.0 411
ORI93020096 86.243 378 52 0 1 378 378 1 0.0 411
ORI93020093 86.559 372 50 0 1 372 1 372 0.0 411
ORI94030301 86.559 372 50 0 1 372 1 372 0.0 411
ORI94030298 86.559 372 50 0 1 372 1 372 0.0 411
ORI92720079 86.559 372 50 0 1 372 1 372 0.0 411
ORI92720078 86.559 372 50 0 1 372 1 372 0.0 411
ORI92330207 86.243 378 52 0 1 378 378 1 0.0 411
ORI92320058 86.243 378 52 0 1 378 378 1 0.0 411
ORI92220053 86.559 372 50 0 1 372 1 372 0.0 411
ORI30020034 86.559 372 50 0 1 372 82 453 0.0 411
ORI10030083 86.243 378 52 0 1 378 378 1 0.0 411
ORI93020104 86.559 372 49 1 1 372 1 371 0.0 409
ORI96000417 86.29 372 51 0 1 372 1 372 0.0 405
ORI96000415 86.29 372 51 0 1 372 1 372 0.0 405
ORI96000410 86.29 372 51 0 1 372 1 372 0.0 405
ORI96000407 86.29 372 51 0 1 372 1 372 0.0 405
ORI96000406 86.29 372 51 0 1 372 1 372 0.0 405
ORI96000404 86.29 372 51 0 1 372 1 372 0.0 405
ORI96000402 86.29 372 51 0 1 372 1 372 0.0 405
ORI95030447 85.979 378 53 0 1 378 378 1 0.0 405
ORI96000365 86.29 372 51 0 1 372 1 372 0.0 405
ORI94030299 86.29 372 51 0 1 372 1 372 0.0 405
ORI50020036 86.29 372 51 0 1 372 1 372 0.0 405
ORI30020033 86.29 372 51 0 1 372 1 372 0.0 405
ORI10020028 86.29 372 51 0 1 372 1 372 0.0 405
ORI93020103 86.016 379 50 3 1 378 377 1 0.0 403
ORI96000413 86.022 372 52 0 1 372 1 372 0.0 399
ORI96000412 86.022 372 52 0 1 372 1 372 0.0 399
ORI96000403 86.022 372 52 0 1 372 1 372 0.0 399
ORI10020012 86.022 372 52 0 1 372 1 372 0.0 399
ORI94030300 85.753 372 53 0 1 372 1 372 0.0 394
ORI10030084 85.45 378 55 0 1 378 378 1 0.0 394
ORI94030323 84.737 380 44 11 7 378 377 4 0.0 368
ORI96000432 84.677 372 46 11 7 372 367 1 0.0 361
ORI96000434 83.554 377 49 9 7 377 374 5 0.0 340
ORI96000393 83.598 378 47 11 7 377 8 377 0.0 340
ORI95020130 83.554 377 49 9 7 377 8 377 0.0 340
ORI93020089 83.554 377 49 9 7 377 8 377 0.0 340
ORI92020049 83.554 377 49 9 7 377 8 377 0.0 340
ORI94030388 83.033 389 44 18 1 377 1 379 0.0 333
ORI93020120 83.333 372 51 8 7 372 367 1 0.0 333
ORI93020111 82.677 381 58 7 1 377 381 5 0.0 331
ORI92520072 82.677 381 58 7 1 377 381 5 0.0 331
ORI95020126 82.62 374 50 13 7 372 367 1 0.0 316
ORI96000429 82.258 372 55 10 7 372 367 1 0.0 311
ORI95020123 82.21 371 57 9 7 372 367 1 0.0 311
ORI96000423 84.192 291 42 4 42 330 331 43 0.0 279
ORI94030317 76.955 243 46 9 89 326 90 327 2.66e-31 130