RefSeq NC_008258.1
Accession number NC_008258.1
DoriC accession number ORI30020034
OriC length 459 nt
OriC AT content 0.538126
The location of oriC region 3858219..3858677 nt
Browse in NCBI
OriC map
OriC sequences
gidAACGCGCCGCAGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGGAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGATTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACGGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGAACGCACGATCTGTATACmioC
gidAACGCGCCGCAGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGGAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGATTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACGGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGAACGCACGATCTGTATACmioC
gidAACGCGCCGCAGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGGAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGATTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACGGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGAACGCACGATCTGTATACmioC
gidAACGCGCCGCAGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGGAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGATTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACGGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGAACGCACGATCTGTATACmioC
gidAACGCGCCGCAGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGGAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGATTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACGGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGAACGCACGATCTGTATACmioC
gidAACGCGCCGCAGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGGAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGATTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACGGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGAACGCACGATCTGTATACmioC
gidAACGCGCCGCAGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGGAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGATTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACGGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGAACGCACGATCTGTATACmioC
gidaACGCGCCGCAGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGGAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGATTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACGGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGAACGCACGATCTGTATACmioc
gidAACGCGCCGCAGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGGAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGATTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACGGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGAACGCACGATCTGTATACmioC
gidAACGCGCCGCAGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGGAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGATTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACGGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGAACGCACGATCTGTATACmioC
gidAACGCGCCGCAGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGGAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGATTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACGGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGAACGCACGATCTGTATACmioC
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif GABCBSGGDBCCTGG

StartP-valueSite
1641.20e-09GCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAA
3112.58e-07AACTGTGAATGATCGGTGATCCTGGACCGTATAAG
193.92e-07CAGCCATCGCGGCCTCGGTGCCTGCATGACCCCCG
1205.47e-07AAATGGATTGGAGCCCGGGCCGTGGATTCTACTCA

Motif AGGATC

StartP-valueSite
2922.65e-04CAACCTGGAAAGGATCATTAACTGTG
2602.65e-04GTGGATAACAAGGATCCGATTTTTAA
2342.65e-04ATCTCTTATTAGGATCGCACTGCCCT
642.65e-04TGACGTCAAAAGGATCCGGATAAAAC
2745.72e-04TCCGATTTTTAAGATCAACAACCTGG

Motif CCSCMGCC

StartP-valueSite
385.71e-06GCCTGCATGACCCCCGCCAATGATGATG
62.78e-05ACGCGCCGCAGCCATCGCGGCCT
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI30020034 100.0 459 0 0 1 459 1 459 0.0 848
ORI96000390 99.206 378 3 0 82 459 1 378 0.0 682
ORI10030036 99.206 378 3 0 82 459 378 1 0.0 682
ORI10030030 99.206 378 3 0 82 459 1 378 0.0 682
ORI96000414 98.942 378 4 0 82 459 1 378 0.0 676
ORI93020113 98.942 378 4 0 82 459 1 378 0.0 676
ORI92720080 98.942 378 4 0 82 459 1 378 0.0 676
ORI10030083 98.942 378 4 0 82 459 378 1 0.0 676
ORI96000422 98.677 378 5 0 82 459 1 378 0.0 671
ORI96000408 98.677 378 5 0 82 459 1 378 0.0 671
ORI96000405 98.677 378 5 0 82 459 1 378 0.0 671
ORI96000400 98.677 378 5 0 82 459 378 1 0.0 671
ORI93020099 98.677 378 5 0 82 459 1 378 0.0 671
ORI93020090 98.677 378 5 0 82 459 1 378 0.0 671
ORI92720076 98.677 378 5 0 82 459 1 378 0.0 671
ORI92330196 98.677 378 5 0 82 459 1 378 0.0 671
ORI96000364 98.677 378 5 0 82 459 378 1 0.0 671
ORI10020005 98.677 378 5 0 82 459 1 378 0.0 671
ORI10020004 98.677 378 5 0 82 459 1 378 0.0 671
ORI10020002 98.677 378 5 0 82 459 1 378 0.0 671
ORI10020001 98.677 378 5 0 82 459 378 1 0.0 671
ORI96000438 98.413 378 6 0 82 459 378 1 0.0 665
ORI96000437 98.413 378 6 0 82 459 378 1 0.0 665
ORI96000436 98.413 378 6 0 82 459 378 1 0.0 665
ORI96000416 98.413 378 6 0 82 459 1 378 0.0 665
ORI96000411 98.413 378 6 0 82 459 1 378 0.0 665
ORI96000409 98.413 378 6 0 82 459 1 378 0.0 665
ORI96000368 98.413 378 6 0 82 459 1 378 0.0 665
ORI93020102 98.413 378 6 0 82 459 378 1 0.0 665
ORI96000367 98.413 378 6 0 82 459 1 378 0.0 665
ORI93020098 98.413 378 6 0 82 459 1 378 0.0 665
ORI93020096 98.413 378 6 0 82 459 378 1 0.0 665
ORI93020093 98.413 378 6 0 82 459 1 378 0.0 665
ORI94030302 98.413 378 6 0 82 459 1 378 0.0 665
ORI94030301 98.413 378 6 0 82 459 1 378 0.0 665
ORI94030298 98.413 378 6 0 82 459 1 378 0.0 665
ORI92720078 98.413 378 6 0 82 459 1 378 0.0 665
ORI92330207 98.413 378 6 0 82 459 378 1 0.0 665
ORI92320059 98.413 378 6 0 82 459 1 378 0.0 665
ORI92320058 98.413 378 6 0 82 459 378 1 0.0 665
ORI92220053 98.413 378 6 0 82 459 1 378 0.0 665
ORI96000417 98.148 378 7 0 82 459 1 378 0.0 660
ORI96000415 98.148 378 7 0 82 459 1 378 0.0 660
ORI96000410 98.148 378 7 0 82 459 1 378 0.0 660
ORI96000407 98.148 378 7 0 82 459 1 378 0.0 660
ORI96000406 98.148 378 7 0 82 459 1 378 0.0 660
ORI96000401 98.148 378 7 0 82 459 1 378 0.0 660
ORI95030447 98.148 378 7 0 82 459 378 1 0.0 660
ORI96000365 98.148 378 7 0 82 459 1 378 0.0 660
ORI94030303 98.148 378 7 0 82 459 1 378 0.0 660
ORI92220052 98.148 378 7 0 82 459 1 378 0.0 660
ORI30020033 98.148 378 7 0 82 459 1 378 0.0 660
ORI10030084 98.148 378 7 0 82 459 378 1 0.0 660
ORI10030070 98.148 378 7 0 82 459 378 1 0.0 660
ORI93020104 98.148 378 6 1 82 459 1 377 0.0 658
ORI96000413 97.884 378 8 0 82 459 1 378 0.0 654
ORI96000412 97.884 378 8 0 82 459 1 378 0.0 654
ORI96000404 97.884 378 8 0 82 459 1 378 0.0 654
ORI96000403 97.884 378 8 0 82 459 1 378 0.0 654
ORI96000402 97.884 378 8 0 82 459 1 378 0.0 654
ORI94030299 97.884 378 8 0 82 459 1 378 0.0 654
ORI92720079 97.884 378 8 0 82 459 1 378 0.0 654
ORI50020036 97.884 378 8 0 82 459 1 378 0.0 654
ORI10020028 97.884 378 8 0 82 459 1 378 0.0 654
ORI10020012 97.884 378 8 0 82 459 1 378 0.0 654
ORI93020103 97.884 378 7 1 82 459 377 1 0.0 652
ORI94030300 97.619 378 9 0 82 459 1 378 0.0 649
ORI93030277 89.211 380 37 4 82 459 378 1 0.0 472
ORI92230170 89.008 373 39 2 82 453 1 372 0.0 460
ORI96000399 86.828 372 49 0 82 453 1 372 0.0 416
ORI92520067 86.828 372 49 0 82 453 1 372 0.0 416
ORI92520066 86.828 372 49 0 82 453 1 372 0.0 416
ORI92520065 86.828 372 49 0 82 453 1 372 0.0 416
ORI10020021 86.828 372 49 0 82 453 1 372 0.0 416
ORI92520068 86.559 372 50 0 82 453 1 372 0.0 411
ORI95030469 86.29 372 51 0 82 453 1 372 0.0 405
ORI95030444 86.29 372 51 0 82 453 1 372 0.0 405
ORI95020132 86.29 372 51 0 82 453 1 372 0.0 405
ORI95030443 86.29 372 51 0 82 453 1 372 0.0 405
ORI95030442 86.29 372 51 0 82 453 1 372 0.0 405
ORI95020131 86.29 372 51 0 82 453 1 372 0.0 405
ORI95020129 86.016 379 51 2 82 459 378 1 0.0 405
ORI95030441 85.979 378 53 0 82 459 396 19 0.0 405
ORI95030436 86.29 372 51 0 82 453 1 372 0.0 405
ORI92720083 86.29 372 51 0 82 453 1 372 0.0 405
ORI92520073 86.29 372 51 0 82 453 1 372 0.0 405
ORI92520064 86.29 372 51 0 82 453 1 372 0.0 405
ORI10020015 86.016 379 51 2 82 459 378 1 0.0 405
ORI10020010 86.016 379 51 2 82 459 378 1 0.0 405
ORI10020009 86.29 372 51 0 82 453 1 372 0.0 405
ORI92520071 85.714 378 54 0 82 459 378 1 0.0 399
ORI92230183 86.022 372 52 0 82 453 1 372 0.0 399
ORI10020023 86.022 372 52 0 82 453 1 372 0.0 399
ORI94030400 86.872 358 43 4 82 437 1 356 0.0 398
ORI96000434 85.864 382 40 12 82 456 381 7 0.0 394
ORI95020130 86.016 379 39 12 82 453 1 372 0.0 394
ORI93020089 86.016 379 39 12 82 453 1 372 0.0 394
ORI92520070 85.753 372 53 0 82 453 1 372 0.0 394
ORI92020049 86.016 379 39 12 82 453 1 372 0.0 394
ORI96000393 85.752 379 40 12 82 453 1 372 0.0 388
ORI92230179 85.904 376 40 11 82 451 377 9 0.0 388
ORI94030388 86.141 368 40 11 82 443 1 363 0.0 387
ORI94030323 85.411 377 47 8 88 459 377 4 0.0 385
ORI92520072 85.302 381 44 11 82 456 381 7 0.0 383
ORI93020111 85.039 381 45 11 82 456 381 7 0.0 377
ORI96000432 83.113 379 52 12 82 453 374 1 0.0 335
ORI93020120 82.32 362 54 9 82 437 374 17 0.0 305
ORI95020123 82.044 362 55 10 82 437 374 17 0.0 300
ORI96000429 81.818 363 54 11 82 437 374 17 0.0 294
ORI95020126 80.939 362 59 10 82 437 374 17 0.0 278
ORI96000423 80.479 292 51 5 123 411 331 43 0.0 219
ORI93020094 77.366 243 44 10 170 407 289 53 2.52e-32 134