RefSeq NC_010067.1
Accession number NC_010067.1
DoriC accession number ORI92230179
OriC length 377 nt
OriC AT content 0.570292
The location of oriC region 3711019..3711395 nt
Browse in NCBI
OriC map
OriC sequences
mioCGTGTAAATATCGTGCGAACAACTGTGGATAACTATGGTAGGAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGCTCACTTTTTGAGTTGTGCATAACTCTCTGTTTTGATCCCAGTTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTGCCAACCTATTGATCTTTACTACATGATCTGGGTTATCCACAGCCTGTCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTAATAGCCAGGATCCCGGGGCTTTCTCCATAGGCTAAAGTTGAGTAGAATCCATCGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATTACCgidA
mioCGTGTAAATATCGTGCGAACAACTGTGGATAACTATGGTAGGAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGCTCACTTTTTGAGTTGTGCATAACTCTCTGTTTTGATCCCAGTTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTGCCAACCTATTGATCTTTACTACATGATCTGGGTTATCCACAGCCTGTCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTAATAGCCAGGATCCCGGGGCTTTCTCCATAGGCTAAAGTTGAGTAGAATCCATCGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATTACCgidA
mioCGTGTAAATATCGTGCGAACAACTGTGGATAACTATGGTAGGAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGCTCACTTTTTGAGTTGTGCATAACTCTCTGTTTTGATCCCAGTTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTGCCAACCTATTGATCTTTACTACATGATCTGGGTTATCCACAGCCTGTCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTAATAGCCAGGATCCCGGGGCTTTCTCCATAGGCTAAAGTTGAGTAGAATCCATCGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATTACCgidA
mioCGTGTAAATATCGTGCGAACAACTGTGGATAACTATGGTAGGAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGCTCACTTTTTGAGTTGTGCATAACTCTCTGTTTTGATCCCAGTTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTGCCAACCTATTGATCTTTACTACATGATCTGGGTTATCCACAGCCTGTCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTAATAGCCAGGATCCCGGGGCTTTCTCCATAGGCTAAAGTTGAGTAGAATCCATCGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATTACCgidA
mioCGTGTAAATATCGTGCGAACAACTGTGGATAACTATGGTAGGAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGCTCACTTTTTGAGTTGTGCATAACTCTCTGTTTTGATCCCAGTTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTGCCAACCTATTGATCTTTACTACATGATCTGGGTTATCCACAGCCTGTCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTAATAGCCAGGATCCCGGGGCTTTCTCCATAGGCTAAAGTTGAGTAGAATCCATCGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATTACCgidA
mioCGTGTAAATATCGTGCGAACAACTGTGGATAACTATGGTAGGAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGCTCACTTTTTGAGTTGTGCATAACTCTCTGTTTTGATCCCAGTTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTGCCAACCTATTGATCTTTACTACATGATCTGGGTTATCCACAGCCTGTCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTAATAGCCAGGATCCCGGGGCTTTCTCCATAGGCTAAAGTTGAGTAGAATCCATCGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATTACCgidA
mioCGTGTAAATATCGTGCGAACAACTGTGGATAACTATGGTAGGAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGCTCACTTTTTGAGTTGTGCATAACTCTCTGTTTTGATCCCAGTTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTGCCAACCTATTGATCTTTACTACATGATCTGGGTTATCCACAGCCTGTCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTAATAGCCAGGATCCCGGGGCTTTCTCCATAGGCTAAAGTTGAGTAGAATCCATCGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATTACCgidA
miocGTGTAAATATCGTGCGAACAACTGTGGATAACTATGGTAGGAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGCTCACTTTTTGAGTTGTGCATAACTCTCTGTTTTGATCCCAGTTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTGCCAACCTATTGATCTTTACTACATGATCTGGGTTATCCACAGCCTGTCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTAATAGCCAGGATCCCGGGGCTTTCTCCATAGGCTAAAGTTGAGTAGAATCCATCGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATTACCgida
mioCGTGTAAATATCGTGCGAACAACTGTGGATAACTATGGTAGGAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGCTCACTTTTTGAGTTGTGCATAACTCTCTGTTTTGATCCCAGTTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTGCCAACCTATTGATCTTTACTACATGATCTGGGTTATCCACAGCCTGTCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTAATAGCCAGGATCCCGGGGCTTTCTCCATAGGCTAAAGTTGAGTAGAATCCATCGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATTACCgidA
mioCGTGTAAATATCGTGCGAACAACTGTGGATAACTATGGTAGGAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGCTCACTTTTTGAGTTGTGCATAACTCTCTGTTTTGATCCCAGTTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTGCCAACCTATTGATCTTTACTACATGATCTGGGTTATCCACAGCCTGTCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTAATAGCCAGGATCCCGGGGCTTTCTCCATAGGCTAAAGTTGAGTAGAATCCATCGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATTACCgidA
mioCGTGTAAATATCGTGCGAACAACTGTGGATAACTATGGTAGGAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGCTCACTTTTTGAGTTGTGCATAACTCTCTGTTTTGATCCCAGTTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTGCCAACCTATTGATCTTTACTACATGATCTGGGTTATCCACAGCCTGTCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTAATAGCCAGGATCCCGGGGCTTTCTCCATAGGCTAAAGTTGAGTAGAATCCATCGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATTACCgidA
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif AGCHWSGATCVCCSGGBHTTC

StartP-valueSite
2791.01e-10TTCTTTTAATAGCCAGGATCCCGGGGCTTTCTCCATAGGCT
1331.53e-09AGTTTATACGGGCCACGATCACCGATCATTCACAGCTAGTG
3205.57e-09AAAGTTGAGTAGAATCCATCGCCCGGGCTTCAATCCATTTT
436.77e-09TATGGTAGGAAGCTTGGATCAACCGGTAGTTATCCAAAGAA

Motif GVGTTRTSCRHRRC

StartP-valueSite
2007.20e-08TACATGATCTGGGTTATCCACAGCCTGTCGCGAT
3571.19e-07TTTTCATACCGCGTTATGCGAGGCAATTACC
933.82e-07CTCACTTTTTGAGTTGTGCATAACTCTCTGTTTT

Motif ANWGATC

StartP-valueSite
2315.68e-05GATCCTAATAAGAGATCACAATAGAAC
1601.16e-04ATTCACAGCTAGTGATCCTTGCCAACC
2461.84e-04TCACAATAGAACAGATCTCTAAATAAA
2623.48e-04CTCTAAATAAAAAGATCTTCTTTTAAT
1785.90e-04TTGCCAACCTATTGATCTTTACTACAT
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI92230179 100.0 377 0 0 1 377 1 377 0.0 697
ORI96000399 92.876 379 24 3 1 377 378 1 0.0 547
ORI95030441 92.857 378 26 1 1 377 19 396 0.0 547
ORI92720083 92.857 378 26 1 1 377 378 1 0.0 547
ORI92520073 92.857 378 26 1 1 377 378 1 0.0 547
ORI92520065 92.876 379 24 3 1 377 378 1 0.0 547
ORI92520064 92.857 378 26 1 1 377 378 1 0.0 547
ORI95020132 92.593 378 27 1 1 377 378 1 0.0 542
ORI92520071 92.593 378 27 1 1 377 1 378 0.0 542
ORI92520068 92.593 378 27 1 1 377 378 1 0.0 542
ORI92230183 92.593 378 27 1 1 377 378 1 0.0 542
ORI10020023 92.593 378 27 1 1 377 378 1 0.0 542
ORI10020009 92.593 378 27 1 1 377 378 1 0.0 542
ORI95030469 92.573 377 27 1 2 377 377 1 0.0 540
ORI95030444 92.573 377 27 1 2 377 377 1 0.0 540
ORI95030443 92.573 377 27 1 2 377 377 1 0.0 540
ORI95030442 92.573 377 27 1 2 377 377 1 0.0 540
ORI95020131 92.573 377 27 1 2 377 377 1 0.0 540
ORI95030436 92.573 377 27 1 2 377 377 1 0.0 540
ORI95020129 92.328 378 28 1 1 377 1 378 0.0 536
ORI92520070 92.328 378 28 1 1 377 378 1 0.0 536
ORI92520067 92.328 378 28 1 1 377 378 1 0.0 536
ORI92520066 92.328 378 28 1 1 377 378 1 0.0 536
ORI10020021 92.328 378 28 1 1 377 378 1 0.0 536
ORI10020015 92.328 378 28 1 1 377 1 378 0.0 536
ORI10020010 92.328 378 28 1 1 377 1 378 0.0 536
ORI94030400 92.084 379 27 3 1 377 378 1 0.0 531
ORI93030277 90.501 379 33 3 1 377 1 378 0.0 497
ORI92230170 87.903 372 40 5 9 377 370 1 0.0 433
ORI96000414 86.364 374 42 8 9 377 370 1 0.0 399
ORI96000401 86.364 374 42 8 9 377 370 1 0.0 399
ORI93020113 86.364 374 42 8 9 377 370 1 0.0 399
ORI94030303 86.364 374 42 8 9 377 370 1 0.0 399
ORI92720080 86.364 374 42 8 9 377 370 1 0.0 399
ORI96000422 86.096 374 43 8 9 377 370 1 0.0 394
ORI96000411 86.096 374 43 8 9 377 370 1 0.0 394
ORI96000408 86.096 374 43 8 9 377 370 1 0.0 394
ORI96000405 86.096 374 43 8 9 377 370 1 0.0 394
ORI96000400 86.096 374 43 8 9 377 9 378 0.0 394
ORI96000390 86.17 376 39 11 9 377 370 1 0.0 394
ORI93020099 86.096 374 43 8 9 377 370 1 0.0 394
ORI93020090 86.096 374 43 8 9 377 370 1 0.0 394
ORI94030302 86.096 374 43 8 9 377 370 1 0.0 394
ORI92720076 86.096 374 43 8 9 377 370 1 0.0 394
ORI92320059 86.096 374 43 8 9 377 370 1 0.0 394
ORI92330196 86.096 374 43 8 9 377 370 1 0.0 394
ORI92220052 86.096 374 43 8 9 377 370 1 0.0 394
ORI96000364 86.096 374 43 8 9 377 9 378 0.0 394
ORI10030036 86.17 376 39 11 9 377 9 378 0.0 394
ORI10030030 86.17 376 39 11 9 377 370 1 0.0 394
ORI10020005 86.096 374 43 8 9 377 370 1 0.0 394
ORI10020004 86.096 374 43 8 9 377 370 1 0.0 394
ORI10020002 86.096 374 43 8 9 377 370 1 0.0 394
ORI10020001 86.096 374 43 8 9 377 9 378 0.0 394
ORI96000438 85.829 374 44 8 9 377 9 378 0.0 388
ORI96000437 85.829 374 44 8 9 377 9 378 0.0 388
ORI96000436 85.829 374 44 8 9 377 9 378 0.0 388
ORI96000416 85.829 374 44 8 9 377 370 1 0.0 388
ORI96000409 85.829 374 44 8 9 377 370 1 0.0 388
ORI96000406 85.829 374 44 8 9 377 370 1 0.0 388
ORI96000368 85.829 374 44 8 9 377 370 1 0.0 388
ORI93020104 85.791 373 45 7 9 377 369 1 0.0 388
ORI93020102 85.829 374 44 8 9 377 9 378 0.0 388
ORI96000367 85.829 374 44 8 9 377 370 1 0.0 388
ORI93020098 85.829 374 44 8 9 377 370 1 0.0 388
ORI93020096 85.829 374 44 8 9 377 9 378 0.0 388
ORI93020093 85.829 374 44 8 9 377 370 1 0.0 388
ORI96000365 85.829 374 44 8 9 377 370 1 0.0 388
ORI94030301 85.829 374 44 8 9 377 370 1 0.0 388
ORI94030298 85.829 374 44 8 9 377 370 1 0.0 388
ORI92720078 85.829 374 44 8 9 377 370 1 0.0 388
ORI92330207 85.829 374 44 8 9 377 9 378 0.0 388
ORI92320058 85.829 374 44 8 9 377 9 378 0.0 388
ORI92220053 85.829 374 44 8 9 377 370 1 0.0 388
ORI30020034 85.904 376 40 11 9 377 451 82 0.0 388
ORI10030083 85.904 376 40 11 9 377 9 378 0.0 388
ORI10030070 85.829 374 44 8 9 377 9 378 0.0 388
ORI96000417 85.561 374 45 8 9 377 370 1 0.0 383
ORI96000415 85.561 374 45 8 9 377 370 1 0.0 383
ORI96000410 85.561 374 45 8 9 377 370 1 0.0 383
ORI96000407 85.561 374 45 8 9 377 370 1 0.0 383
ORI96000404 85.561 374 45 8 9 377 370 1 0.0 383
ORI96000402 85.561 374 45 8 9 377 370 1 0.0 383
ORI95030447 85.561 374 45 8 9 377 9 378 0.0 383
ORI93020103 85.523 373 46 7 9 377 9 377 0.0 383
ORI94030299 85.561 374 45 8 9 377 370 1 0.0 383
ORI92720079 85.561 374 45 8 9 377 370 1 0.0 383
ORI50020036 85.561 374 45 8 9 377 370 1 0.0 383
ORI30020033 85.561 374 45 8 9 377 370 1 0.0 383
ORI10020028 85.561 374 45 8 9 377 370 1 0.0 383
ORI96000413 85.294 374 46 8 9 377 370 1 0.0 377
ORI96000412 85.294 374 46 8 9 377 370 1 0.0 377
ORI96000403 85.294 374 46 8 9 377 370 1 0.0 377
ORI94030300 85.333 375 44 10 9 377 370 1 0.0 377
ORI10020012 85.294 374 46 8 9 377 370 1 0.0 377
ORI10030084 85.027 374 47 8 9 377 9 378 0.0 372
ORI94030323 83.862 378 50 11 1 371 4 377 0.0 350
ORI96000434 83.646 373 55 5 2 371 5 374 0.0 346
ORI96000393 83.646 373 55 5 2 371 377 8 0.0 346
ORI95020130 83.646 373 55 5 2 371 377 8 0.0 346
ORI93020089 83.646 373 55 5 2 371 377 8 0.0 346
ORI92020049 83.646 373 55 5 2 371 377 8 0.0 346
ORI93020111 82.368 380 60 6 2 377 5 381 0.0 324
ORI92520072 82.368 380 60 6 2 377 5 381 0.0 324
ORI94030388 83.149 362 51 10 22 377 358 1 0.0 322
ORI93020120 82.48 371 51 12 9 371 3 367 0.0 313
ORI96000432 82.065 368 58 8 9 371 3 367 0.0 307
ORI96000429 81.941 371 53 12 9 371 3 367 0.0 302
ORI95020126 81.769 373 50 15 9 371 3 367 0.0 296
ORI95020123 80.811 370 59 10 9 371 3 367 0.0 279
ORI96000423 80.844 308 50 8 22 324 16 319 0.0 233
ORI94030317 76.423 246 41 13 53 289 327 90 2.06e-27 117