RefSeq NC_014618.1
Accession number NC_014618.1
DoriC accession number ORI94030323
OriC length 383 nt
OriC AT content 0.569191
The location of oriC region 4775552..4775934 nt
Browse in NCBI
OriC map
OriC sequences
mioCGAAGTGTAAAGATCGTGCGATCAACTGTGGATAACTCTGGTTAAAAGCTTGGATCAACCGGTAGTTATCCAATTAATAAGGTTTGGCTAGTTTTTGAGTTGTGTATAACCCTTCATTCTGATCCCAGCTTATACGGACCAGGATCACCGATCATTCACAGAATGTGATCCTCCTTAAGCGTTTGATCCTAAAAGCAGGATCCCACTTATCCACAGCAAAGGTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTATATAAAAAGATCTTCTTTTAAATACCCAGGATCCCGGGTGCTTTCTCCGACGCGCAAAGTTGAGTAGAATCCACGACCCGGGCTTCAATCCATTTTTCATACCGCGTTATGCGAGGCAGACCACgidA
mioCGAAGTGTAAAGATCGTGCGATCAACTGTGGATAACTCTGGTTAAAAGCTTGGATCAACCGGTAGTTATCCAATTAATAAGGTTTGGCTAGTTTTTGAGTTGTGTATAACCCTTCATTCTGATCCCAGCTTATACGGACCAGGATCACCGATCATTCACAGAATGTGATCCTCCTTAAGCGTTTGATCCTAAAAGCAGGATCCCACTTATCCACAGCAAAGGTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTATATAAAAAGATCTTCTTTTAAATACCCAGGATCCCGGGTGCTTTCTCCGACGCGCAAAGTTGAGTAGAATCCACGACCCGGGCTTCAATCCATTTTTCATACCGCGTTATGCGAGGCAGACCACgidA
mioCGAAGTGTAAAGATCGTGCGATCAACTGTGGATAACTCTGGTTAAAAGCTTGGATCAACCGGTAGTTATCCAATTAATAAGGTTTGGCTAGTTTTTGAGTTGTGTATAACCCTTCATTCTGATCCCAGCTTATACGGACCAGGATCACCGATCATTCACAGAATGTGATCCTCCTTAAGCGTTTGATCCTAAAAGCAGGATCCCACTTATCCACAGCAAAGGTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTATATAAAAAGATCTTCTTTTAAATACCCAGGATCCCGGGTGCTTTCTCCGACGCGCAAAGTTGAGTAGAATCCACGACCCGGGCTTCAATCCATTTTTCATACCGCGTTATGCGAGGCAGACCACgidA
mioCGAAGTGTAAAGATCGTGCGATCAACTGTGGATAACTCTGGTTAAAAGCTTGGATCAACCGGTAGTTATCCAATTAATAAGGTTTGGCTAGTTTTTGAGTTGTGTATAACCCTTCATTCTGATCCCAGCTTATACGGACCAGGATCACCGATCATTCACAGAATGTGATCCTCCTTAAGCGTTTGATCCTAAAAGCAGGATCCCACTTATCCACAGCAAAGGTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTATATAAAAAGATCTTCTTTTAAATACCCAGGATCCCGGGTGCTTTCTCCGACGCGCAAAGTTGAGTAGAATCCACGACCCGGGCTTCAATCCATTTTTCATACCGCGTTATGCGAGGCAGACCACgidA
mioCGAAGTGTAAAGATCGTGCGATCAACTGTGGATAACTCTGGTTAAAAGCTTGGATCAACCGGTAGTTATCCAATTAATAAGGTTTGGCTAGTTTTTGAGTTGTGTATAACCCTTCATTCTGATCCCAGCTTATACGGACCAGGATCACCGATCATTCACAGAATGTGATCCTCCTTAAGCGTTTGATCCTAAAAGCAGGATCCCACTTATCCACAGCAAAGGTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTATATAAAAAGATCTTCTTTTAAATACCCAGGATCCCGGGTGCTTTCTCCGACGCGCAAAGTTGAGTAGAATCCACGACCCGGGCTTCAATCCATTTTTCATACCGCGTTATGCGAGGCAGACCACgidA
mioCGAAGTGTAAAGATCGTGCGATCAACTGTGGATAACTCTGGTTAAAAGCTTGGATCAACCGGTAGTTATCCAATTAATAAGGTTTGGCTAGTTTTTGAGTTGTGTATAACCCTTCATTCTGATCCCAGCTTATACGGACCAGGATCACCGATCATTCACAGAATGTGATCCTCCTTAAGCGTTTGATCCTAAAAGCAGGATCCCACTTATCCACAGCAAAGGTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTATATAAAAAGATCTTCTTTTAAATACCCAGGATCCCGGGTGCTTTCTCCGACGCGCAAAGTTGAGTAGAATCCACGACCCGGGCTTCAATCCATTTTTCATACCGCGTTATGCGAGGCAGACCACgidA
mioCGAAGTGTAAAGATCGTGCGATCAACTGTGGATAACTCTGGTTAAAAGCTTGGATCAACCGGTAGTTATCCAATTAATAAGGTTTGGCTAGTTTTTGAGTTGTGTATAACCCTTCATTCTGATCCCAGCTTATACGGACCAGGATCACCGATCATTCACAGAATGTGATCCTCCTTAAGCGTTTGATCCTAAAAGCAGGATCCCACTTATCCACAGCAAAGGTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTATATAAAAAGATCTTCTTTTAAATACCCAGGATCCCGGGTGCTTTCTCCGACGCGCAAAGTTGAGTAGAATCCACGACCCGGGCTTCAATCCATTTTTCATACCGCGTTATGCGAGGCAGACCACgidA
miocGAAGTGTAAAGATCGTGCGATCAACTGTGGATAACTCTGGTTAAAAGCTTGGATCAACCGGTAGTTATCCAATTAATAAGGTTTGGCTAGTTTTTGAGTTGTGTATAACCCTTCATTCTGATCCCAGCTTATACGGACCAGGATCACCGATCATTCACAGAATGTGATCCTCCTTAAGCGTTTGATCCTAAAAGCAGGATCCCACTTATCCACAGCAAAGGTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTATATAAAAAGATCTTCTTTTAAATACCCAGGATCCCGGGTGCTTTCTCCGACGCGCAAAGTTGAGTAGAATCCACGACCCGGGCTTCAATCCATTTTTCATACCGCGTTATGCGAGGCAGACCACgida
mioCGAAGTGTAAAGATCGTGCGATCAACTGTGGATAACTCTGGTTAAAAGCTTGGATCAACCGGTAGTTATCCAATTAATAAGGTTTGGCTAGTTTTTGAGTTGTGTATAACCCTTCATTCTGATCCCAGCTTATACGGACCAGGATCACCGATCATTCACAGAATGTGATCCTCCTTAAGCGTTTGATCCTAAAAGCAGGATCCCACTTATCCACAGCAAAGGTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTATATAAAAAGATCTTCTTTTAAATACCCAGGATCCCGGGTGCTTTCTCCGACGCGCAAAGTTGAGTAGAATCCACGACCCGGGCTTCAATCCATTTTTCATACCGCGTTATGCGAGGCAGACCACgidA
mioCGAAGTGTAAAGATCGTGCGATCAACTGTGGATAACTCTGGTTAAAAGCTTGGATCAACCGGTAGTTATCCAATTAATAAGGTTTGGCTAGTTTTTGAGTTGTGTATAACCCTTCATTCTGATCCCAGCTTATACGGACCAGGATCACCGATCATTCACAGAATGTGATCCTCCTTAAGCGTTTGATCCTAAAAGCAGGATCCCACTTATCCACAGCAAAGGTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTATATAAAAAGATCTTCTTTTAAATACCCAGGATCCCGGGTGCTTTCTCCGACGCGCAAAGTTGAGTAGAATCCACGACCCGGGCTTCAATCCATTTTTCATACCGCGTTATGCGAGGCAGACCACgidA
mioCGAAGTGTAAAGATCGTGCGATCAACTGTGGATAACTCTGGTTAAAAGCTTGGATCAACCGGTAGTTATCCAATTAATAAGGTTTGGCTAGTTTTTGAGTTGTGTATAACCCTTCATTCTGATCCCAGCTTATACGGACCAGGATCACCGATCATTCACAGAATGTGATCCTCCTTAAGCGTTTGATCCTAAAAGCAGGATCCCACTTATCCACAGCAAAGGTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTATATAAAAAGATCTTCTTTTAAATACCCAGGATCCCGGGTGCTTTCTCCGACGCGCAAAGTTGAGTAGAATCCACGACCCGGGCTTCAATCCATTTTTCATACCGCGTTATGCGAGGCAGACCACgidA
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif CCAGGATCCCVGNT

StartP-valueSite
2851.40e-09TTTTAAATACCCAGGATCCCGGGTGCTTTCTCCG
1382.43e-07CTTATACGGACCAGGATCACCGATCATTCACAGA
3303.98e-07TGAGTAGAATCCACGACCCGGGCTTCAATCCATT
1945.70e-07GATCCTAAAAGCAGGATCCCACTTATCCACAGCA

Motif GATCCT

StartP-valueSite
2242.39e-04AGCAAAGGTCGATCCTAATAAGAGAT
1842.39e-04TTAAGCGTTTGATCCTAAAAGCAGGA
1662.39e-04CACAGAATGTGATCCTCCTTAAGCGT
1204.43e-04CCTTCATTCTGATCCCAGCTTATACG
2687.24e-04TATATAAAAAGATCTTCTTTTAAATA

Motif GCKTTMTSCGASGC

StartP-valueSite
3636.64e-09TTTTCATACCGCGTTATGCGAGGCAGACCAC
2992.10e-08GATCCCGGGTGCTTTCTCCGACGCGCAAAGTTGA
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI94030323 100.0 383 0 0 1 383 1 383 0.0 708
ORI96000434 87.855 387 36 10 1 383 1 380 0.0 444
ORI95020130 87.855 387 36 10 1 383 381 2 0.0 444
ORI93020089 87.855 387 36 10 1 383 381 2 0.0 444
ORI92020049 87.855 387 36 10 1 383 381 2 0.0 444
ORI96000393 87.597 387 37 10 1 383 381 2 0.0 438
ORI94030388 87.879 363 34 9 25 383 358 2 0.0 418
ORI92220052 87.332 371 39 8 10 377 372 7 0.0 418
ORI92520072 86.494 385 45 6 1 383 1 380 0.0 416
ORI96000416 87.062 371 40 8 10 377 372 7 0.0 412
ORI96000411 87.062 371 40 8 10 377 372 7 0.0 412
ORI96000409 87.062 371 40 8 10 377 372 7 0.0 412
ORI93030277 86.737 377 42 8 4 377 1 372 0.0 412
ORI93020102 86.737 377 42 8 4 377 1 372 0.0 412
ORI96000367 87.062 371 40 8 10 377 372 7 0.0 412
ORI93020098 87.062 371 40 8 10 377 372 7 0.0 412
ORI93020096 86.737 377 42 8 4 377 1 372 0.0 412
ORI93020093 87.062 371 40 8 10 377 372 7 0.0 412
ORI94030302 87.062 371 40 8 10 377 372 7 0.0 412
ORI94030298 87.062 371 40 8 10 377 372 7 0.0 412
ORI92330207 86.737 377 42 8 4 377 1 372 0.0 412
ORI92320059 87.062 371 40 8 10 377 372 7 0.0 412
ORI92320058 86.737 377 42 8 4 377 1 372 0.0 412
ORI10030070 86.737 377 42 8 4 377 1 372 0.0 412
ORI93020111 86.234 385 46 6 1 383 1 380 0.0 411
ORI93020104 87.062 371 39 9 10 377 371 7 0.0 411
ORI96000438 86.472 377 43 8 4 377 1 372 0.0 407
ORI96000437 86.472 377 43 8 4 377 1 372 0.0 407
ORI96000436 86.472 377 43 8 4 377 1 372 0.0 407
ORI96000417 86.792 371 41 8 10 377 372 7 0.0 407
ORI96000415 86.792 371 41 8 10 377 372 7 0.0 407
ORI96000414 86.792 371 41 8 10 377 372 7 0.0 407
ORI96000410 86.792 371 41 8 10 377 372 7 0.0 407
ORI96000408 86.792 371 41 8 10 377 372 7 0.0 407
ORI96000407 86.792 371 41 8 10 377 372 7 0.0 407
ORI96000406 86.792 371 41 8 10 377 372 7 0.0 407
ORI96000405 86.792 371 41 8 10 377 372 7 0.0 407
ORI96000401 86.792 371 41 8 10 377 372 7 0.0 407
ORI96000400 86.472 377 43 8 4 377 1 372 0.0 407
ORI95030447 86.472 377 43 8 4 377 1 372 0.0 407
ORI93020113 86.792 371 41 8 10 377 372 7 0.0 407
ORI93020090 86.792 371 41 8 10 377 372 7 0.0 407
ORI96000365 86.792 371 41 8 10 377 372 7 0.0 407
ORI94030303 86.792 371 41 8 10 377 372 7 0.0 407
ORI94030301 86.792 371 41 8 10 377 372 7 0.0 407
ORI92720080 86.792 371 41 8 10 377 372 7 0.0 407
ORI92720078 86.792 371 41 8 10 377 372 7 0.0 407
ORI92330196 86.792 371 41 8 10 377 372 7 0.0 407
ORI92220053 86.792 371 41 8 10 377 372 7 0.0 407
ORI30020033 86.792 371 41 8 10 377 372 7 0.0 407
ORI96000364 86.472 377 43 8 4 377 1 372 0.0 407
ORI10020002 86.792 371 41 8 10 377 372 7 0.0 407
ORI10020001 86.472 377 43 8 4 377 1 372 0.0 407
ORI93020103 86.544 379 38 11 4 377 1 371 0.0 405
ORI96000422 86.559 372 40 10 10 377 372 7 0.0 401
ORI96000413 86.523 371 42 8 10 377 372 7 0.0 401
ORI96000412 86.523 371 42 8 10 377 372 7 0.0 401
ORI96000404 86.523 371 42 8 10 377 372 7 0.0 401
ORI96000403 86.523 371 42 8 10 377 372 7 0.0 401
ORI96000402 86.523 371 42 8 10 377 372 7 0.0 401
ORI96000368 86.523 371 42 8 10 377 372 7 0.0 401
ORI93020099 86.559 372 40 10 10 377 372 7 0.0 401
ORI94030299 86.523 371 42 8 10 377 372 7 0.0 401
ORI92720079 86.523 371 42 8 10 377 372 7 0.0 401
ORI92720076 86.559 372 40 10 10 377 372 7 0.0 401
ORI50020036 86.523 371 42 8 10 377 372 7 0.0 401
ORI10020028 86.523 371 42 8 10 377 372 7 0.0 401
ORI10030083 86.207 377 44 8 4 377 1 372 0.0 401
ORI10020012 86.523 371 42 8 10 377 372 7 0.0 401
ORI10020005 86.559 372 40 10 10 377 372 7 0.0 401
ORI10020004 86.559 372 40 10 10 377 372 7 0.0 401
ORI10030084 85.942 377 45 8 4 377 1 372 0.0 396
ORI96000390 86.022 372 42 10 10 377 372 7 0.0 390
ORI94030300 85.984 371 44 8 10 377 372 7 0.0 390
ORI10030036 85.714 378 44 10 4 377 1 372 0.0 390
ORI10030030 86.022 372 42 10 10 377 372 7 0.0 390
ORI92230170 85.867 375 37 15 10 377 372 7 0.0 385
ORI30020034 85.714 371 45 8 10 377 453 88 0.0 385
ORI96000399 84.881 377 49 8 4 377 378 7 0.0 374
ORI95020129 85.0 380 43 11 4 377 1 372 0.0 374
ORI92520066 85.0 380 43 11 4 377 378 7 0.0 374
ORI92520065 84.881 377 49 8 4 377 378 7 0.0 374
ORI10020015 85.0 380 43 11 4 377 1 372 0.0 374
ORI10020010 85.0 380 43 11 4 377 1 372 0.0 374
ORI95020132 84.697 379 46 9 4 377 378 7 0.0 368
ORI92520068 84.737 380 44 11 4 377 378 7 0.0 368
ORI10020009 84.697 379 46 9 4 377 378 7 0.0 368
ORI95030469 84.656 378 46 9 5 377 377 7 0.0 366
ORI95030444 84.656 378 46 9 5 377 377 7 0.0 366
ORI95030443 84.656 378 46 9 5 377 377 7 0.0 366
ORI95030442 84.656 378 46 9 5 377 377 7 0.0 366
ORI95020131 84.656 378 46 9 5 377 377 7 0.0 366
ORI95030441 84.514 381 47 9 2 377 17 390 0.0 366
ORI95030436 84.656 378 46 9 5 377 377 7 0.0 366
ORI94030400 84.392 378 49 10 4 377 378 7 0.0 363
ORI92720083 84.433 379 47 9 4 377 378 7 0.0 363
ORI92520073 84.433 379 47 9 4 377 378 7 0.0 363
ORI92520067 84.474 380 45 11 4 377 378 7 0.0 363
ORI92520064 84.433 379 47 9 4 377 378 7 0.0 363
ORI92230183 84.474 380 45 11 4 377 378 7 0.0 363
ORI10020021 84.474 380 45 11 4 377 378 7 0.0 363
ORI92520071 84.169 379 48 9 4 377 1 372 0.0 357
ORI10020023 84.169 379 48 9 4 377 378 7 0.0 357
ORI92520070 83.905 379 49 9 4 377 378 7 0.0 351
ORI92230179 83.862 378 50 11 4 377 1 371 0.0 350
ORI96000432 82.759 377 58 7 10 383 1 373 0.0 329
ORI93020120 81.266 379 60 7 10 383 1 373 0.0 296
ORI95020126 80.851 376 67 5 10 383 1 373 0.0 291
ORI96000429 80.628 382 57 12 10 383 1 373 0.0 279
ORI95020123 80.423 378 65 8 10 383 1 373 0.0 279
ORI96000423 78.328 323 57 10 25 341 16 331 0.0 196