RefSeq NC_011080.1
Accession number NC_011080.1
DoriC accession number ORI92520064
OriC length 378 nt
OriC AT content 0.55291
The location of oriC region 4050053..4050430 nt
Browse in NCBI
OriC map
OriC sequences
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCGCCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCGCCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCGCCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCGCCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCGCCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCGCCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCGCCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
gidaGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCGCCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioc
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCGCCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCGCCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCGCCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGGGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif TKVHTHGGATMACKVSCKGTK

StartP-valueSite
3062.23e-09ACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCT
2063.23e-09ATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGT
71.65e-08GGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATT
321.80e-08GGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTC
1486.40e-08TTGTGATCTCTTATTAGGATCGCGCCAGGCTGTGGATAACC

Motif CBGGGATC

StartP-valueSite
869.49e-06GGAGAAAGCCCCGGGATCCGGGCTATTA
1772.87e-05CTGTGGATAACCCGGATCCTGTAATAAA
2554.11e-05CCCGTATAAGCTGGGATCAAAACGGGTA
2338.42e-05TGTGAATGATCGGTGATCGTGGCCCGTA

Motif ABYTWTMCAC

StartP-valueSite
3695.88e-06GGATCGCACGATCTTTACAC
3465.88e-06TTTCCACCAGATTTATCCACAATGGATCGC
3338.53e-06GGTTGATCCAAGCTTTCCACCAGATTTATC
2722.07e-05CAAAACGGGTACTTATACACAACTCAAAAA
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI95030441 100.0 378 0 0 1 378 396 19 0.0 699
ORI92720083 100.0 378 0 0 1 378 1 378 0.0 699
ORI92520073 100.0 378 0 0 1 378 1 378 0.0 699
ORI92520064 100.0 378 0 0 1 378 1 378 0.0 699
ORI95020132 99.735 378 1 0 1 378 1 378 0.0 693
ORI92520071 99.735 378 1 0 1 378 378 1 0.0 693
ORI92520068 99.735 378 1 0 1 378 1 378 0.0 693
ORI92230183 99.735 378 1 0 1 378 1 378 0.0 693
ORI10020023 99.735 378 1 0 1 378 1 378 0.0 693
ORI10020009 99.735 378 1 0 1 378 1 378 0.0 693
ORI95030469 99.735 377 1 0 1 377 1 377 0.0 691
ORI95030444 99.735 377 1 0 1 377 1 377 0.0 691
ORI95030443 99.735 377 1 0 1 377 1 377 0.0 691
ORI95030442 99.735 377 1 0 1 377 1 377 0.0 691
ORI95020131 99.735 377 1 0 1 377 1 377 0.0 691
ORI95030436 99.735 377 1 0 1 377 1 377 0.0 691
ORI96000399 99.471 378 2 0 1 378 1 378 0.0 688
ORI92520070 99.471 378 2 0 1 378 1 378 0.0 688
ORI92520067 99.471 378 2 0 1 378 1 378 0.0 688
ORI92520066 99.471 378 2 0 1 378 1 378 0.0 688
ORI92520065 99.471 378 2 0 1 378 1 378 0.0 688
ORI10020021 99.471 378 2 0 1 378 1 378 0.0 688
ORI95020129 98.677 378 5 0 1 378 378 1 0.0 671
ORI10020015 98.677 378 5 0 1 378 378 1 0.0 671
ORI10020010 98.677 378 5 0 1 378 378 1 0.0 671
ORI94030400 94.18 378 22 0 1 378 1 378 0.0 577
ORI92230179 92.857 378 26 1 1 378 377 1 0.0 547
ORI93030277 91.557 379 30 2 1 378 378 1 0.0 521
ORI92230170 88.032 376 37 5 1 372 1 372 0.0 438
ORI96000401 87.366 372 47 0 1 372 1 372 0.0 427
ORI94030303 87.366 372 47 0 1 372 1 372 0.0 427
ORI96000414 86.828 372 49 0 1 372 1 372 0.0 416
ORI96000411 86.828 372 49 0 1 372 1 372 0.0 416
ORI93020113 86.828 372 49 0 1 372 1 372 0.0 416
ORI94030302 86.828 372 49 0 1 372 1 372 0.0 416
ORI92720080 86.828 372 49 0 1 372 1 372 0.0 416
ORI92320059 86.828 372 49 0 1 372 1 372 0.0 416
ORI96000422 86.559 372 50 0 1 372 1 372 0.0 411
ORI96000408 86.559 372 50 0 1 372 1 372 0.0 411
ORI96000406 86.559 372 50 0 1 372 1 372 0.0 411
ORI96000405 86.559 372 50 0 1 372 1 372 0.0 411
ORI96000400 86.243 378 52 0 1 378 378 1 0.0 411
ORI96000390 86.559 372 50 0 1 372 1 372 0.0 411
ORI93020099 86.559 372 50 0 1 372 1 372 0.0 411
ORI93020090 86.559 372 50 0 1 372 1 372 0.0 411
ORI96000365 86.559 372 50 0 1 372 1 372 0.0 411
ORI92720076 86.559 372 50 0 1 372 1 372 0.0 411
ORI92330196 86.559 372 50 0 1 372 1 372 0.0 411
ORI92220052 86.559 372 50 0 1 372 1 372 0.0 411
ORI96000364 86.243 378 52 0 1 378 378 1 0.0 411
ORI10030070 86.243 378 52 0 1 378 378 1 0.0 411
ORI10030036 86.243 378 52 0 1 378 378 1 0.0 411
ORI10030030 86.559 372 50 0 1 372 1 372 0.0 411
ORI10020005 86.559 372 50 0 1 372 1 372 0.0 411
ORI10020004 86.559 372 50 0 1 372 1 372 0.0 411
ORI10020002 86.559 372 50 0 1 372 1 372 0.0 411
ORI10020001 86.243 378 52 0 1 378 378 1 0.0 411
ORI96000438 85.979 378 53 0 1 378 378 1 0.0 405
ORI96000437 85.979 378 53 0 1 378 378 1 0.0 405
ORI96000436 85.979 378 53 0 1 378 378 1 0.0 405
ORI96000416 86.29 372 51 0 1 372 1 372 0.0 405
ORI96000409 86.29 372 51 0 1 372 1 372 0.0 405
ORI96000368 86.29 372 51 0 1 372 1 372 0.0 405
ORI93020102 85.979 378 53 0 1 378 378 1 0.0 405
ORI96000367 86.29 372 51 0 1 372 1 372 0.0 405
ORI93020098 86.29 372 51 0 1 372 1 372 0.0 405
ORI93020096 85.979 378 53 0 1 378 378 1 0.0 405
ORI93020093 86.29 372 51 0 1 372 1 372 0.0 405
ORI94030301 86.29 372 51 0 1 372 1 372 0.0 405
ORI94030298 86.29 372 51 0 1 372 1 372 0.0 405
ORI92720079 86.29 372 51 0 1 372 1 372 0.0 405
ORI92720078 86.29 372 51 0 1 372 1 372 0.0 405
ORI92330207 85.979 378 53 0 1 378 378 1 0.0 405
ORI92320058 85.979 378 53 0 1 378 378 1 0.0 405
ORI92220053 86.29 372 51 0 1 372 1 372 0.0 405
ORI30020034 86.29 372 51 0 1 372 82 453 0.0 405
ORI10030083 85.979 378 53 0 1 378 378 1 0.0 405
ORI93020104 86.29 372 50 1 1 372 1 371 0.0 403
ORI96000417 86.022 372 52 0 1 372 1 372 0.0 399
ORI96000415 86.022 372 52 0 1 372 1 372 0.0 399
ORI96000410 86.022 372 52 0 1 372 1 372 0.0 399
ORI96000407 86.022 372 52 0 1 372 1 372 0.0 399
ORI96000404 86.022 372 52 0 1 372 1 372 0.0 399
ORI96000402 86.022 372 52 0 1 372 1 372 0.0 399
ORI95030447 85.714 378 54 0 1 378 378 1 0.0 399
ORI94030299 86.022 372 52 0 1 372 1 372 0.0 399
ORI50020036 86.022 372 52 0 1 372 1 372 0.0 399
ORI30020033 86.022 372 52 0 1 372 1 372 0.0 399
ORI10020028 86.022 372 52 0 1 372 1 372 0.0 399
ORI93020103 85.752 379 51 3 1 378 377 1 0.0 398
ORI96000413 85.753 372 53 0 1 372 1 372 0.0 394
ORI96000412 85.753 372 53 0 1 372 1 372 0.0 394
ORI96000403 85.753 372 53 0 1 372 1 372 0.0 394
ORI10020012 85.753 372 53 0 1 372 1 372 0.0 394
ORI94030300 85.484 372 54 0 1 372 1 372 0.0 388
ORI10030084 85.185 378 56 0 1 378 378 1 0.0 388
ORI94030323 84.433 379 47 9 7 378 377 4 0.0 363
ORI96000432 84.409 372 47 11 7 372 367 1 0.0 355
ORI96000434 83.245 376 52 7 7 377 374 5 0.0 335
ORI96000393 83.289 377 50 9 7 377 8 377 0.0 335
ORI95020130 83.245 376 52 7 7 377 8 377 0.0 335
ORI93020089 83.245 376 52 7 7 377 8 377 0.0 335
ORI92020049 83.245 376 52 7 7 377 8 377 0.0 335
ORI93020120 83.288 371 53 8 7 372 367 1 0.0 333
ORI94030388 82.776 389 45 18 1 377 1 379 0.0 327
ORI93020111 82.368 380 61 5 1 377 381 5 0.0 326
ORI92520072 82.368 380 61 5 1 377 381 5 0.0 326
ORI95020126 82.527 372 54 11 7 372 367 1 0.0 316
ORI96000429 82.258 372 55 10 7 372 367 1 0.0 311
ORI95020123 81.941 371 58 9 7 372 367 1 0.0 305
ORI96000423 84.536 291 41 4 42 330 331 43 0.0 285
ORI94030317 77.366 243 45 9 89 326 90 327 5.72e-33 135