RefSeq NC_013716.1
Accession number NC_013716.1
DoriC accession number ORI93030277
OriC length 378 nt
OriC AT content 0.563492
The location of oriC region 4232914..4233291 nt
Browse in NCBI
OriC map
OriC sequences
mioCGTGTAAAGATCGTGCGATCGAGTGTGGATAACTCTGGTAAGAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGTTCAGTTTTTGAGTTGTGCATAACCCCGCATTCTGATCCCAGCTTATACGGAGCAGGATCACCGATCATTCACAGCTAATGATCCTTACCAATGTATTGATCTTATTAGCAGGATCCGGCTTATCCACACCCTGTCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATACCCAGGATCCCGGGTCTTTCTCCATCGACTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATAACCgidA
mioCGTGTAAAGATCGTGCGATCGAGTGTGGATAACTCTGGTAAGAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGTTCAGTTTTTGAGTTGTGCATAACCCCGCATTCTGATCCCAGCTTATACGGAGCAGGATCACCGATCATTCACAGCTAATGATCCTTACCAATGTATTGATCTTATTAGCAGGATCCGGCTTATCCACACCCTGTCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATACCCAGGATCCCGGGTCTTTCTCCATCGACTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATAACCgidA
mioCGTGTAAAGATCGTGCGATCGAGTGTGGATAACTCTGGTAAGAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGTTCAGTTTTTGAGTTGTGCATAACCCCGCATTCTGATCCCAGCTTATACGGAGCAGGATCACCGATCATTCACAGCTAATGATCCTTACCAATGTATTGATCTTATTAGCAGGATCCGGCTTATCCACACCCTGTCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATACCCAGGATCCCGGGTCTTTCTCCATCGACTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATAACCgidA
mioCGTGTAAAGATCGTGCGATCGAGTGTGGATAACTCTGGTAAGAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGTTCAGTTTTTGAGTTGTGCATAACCCCGCATTCTGATCCCAGCTTATACGGAGCAGGATCACCGATCATTCACAGCTAATGATCCTTACCAATGTATTGATCTTATTAGCAGGATCCGGCTTATCCACACCCTGTCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATACCCAGGATCCCGGGTCTTTCTCCATCGACTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATAACCgidA
mioCGTGTAAAGATCGTGCGATCGAGTGTGGATAACTCTGGTAAGAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGTTCAGTTTTTGAGTTGTGCATAACCCCGCATTCTGATCCCAGCTTATACGGAGCAGGATCACCGATCATTCACAGCTAATGATCCTTACCAATGTATTGATCTTATTAGCAGGATCCGGCTTATCCACACCCTGTCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATACCCAGGATCCCGGGTCTTTCTCCATCGACTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATAACCgidA
mioCGTGTAAAGATCGTGCGATCGAGTGTGGATAACTCTGGTAAGAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGTTCAGTTTTTGAGTTGTGCATAACCCCGCATTCTGATCCCAGCTTATACGGAGCAGGATCACCGATCATTCACAGCTAATGATCCTTACCAATGTATTGATCTTATTAGCAGGATCCGGCTTATCCACACCCTGTCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATACCCAGGATCCCGGGTCTTTCTCCATCGACTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATAACCgidA
mioCGTGTAAAGATCGTGCGATCGAGTGTGGATAACTCTGGTAAGAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGTTCAGTTTTTGAGTTGTGCATAACCCCGCATTCTGATCCCAGCTTATACGGAGCAGGATCACCGATCATTCACAGCTAATGATCCTTACCAATGTATTGATCTTATTAGCAGGATCCGGCTTATCCACACCCTGTCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATACCCAGGATCCCGGGTCTTTCTCCATCGACTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATAACCgidA
miocGTGTAAAGATCGTGCGATCGAGTGTGGATAACTCTGGTAAGAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGTTCAGTTTTTGAGTTGTGCATAACCCCGCATTCTGATCCCAGCTTATACGGAGCAGGATCACCGATCATTCACAGCTAATGATCCTTACCAATGTATTGATCTTATTAGCAGGATCCGGCTTATCCACACCCTGTCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATACCCAGGATCCCGGGTCTTTCTCCATCGACTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATAACCgida
mioCGTGTAAAGATCGTGCGATCGAGTGTGGATAACTCTGGTAAGAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGTTCAGTTTTTGAGTTGTGCATAACCCCGCATTCTGATCCCAGCTTATACGGAGCAGGATCACCGATCATTCACAGCTAATGATCCTTACCAATGTATTGATCTTATTAGCAGGATCCGGCTTATCCACACCCTGTCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATACCCAGGATCCCGGGTCTTTCTCCATCGACTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATAACCgidA
mioCGTGTAAAGATCGTGCGATCGAGTGTGGATAACTCTGGTAAGAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGTTCAGTTTTTGAGTTGTGCATAACCCCGCATTCTGATCCCAGCTTATACGGAGCAGGATCACCGATCATTCACAGCTAATGATCCTTACCAATGTATTGATCTTATTAGCAGGATCCGGCTTATCCACACCCTGTCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATACCCAGGATCCCGGGTCTTTCTCCATCGACTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATAACCgidA
mioCGTGTAAAGATCGTGCGATCGAGTGTGGATAACTCTGGTAAGAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGTTCAGTTTTTGAGTTGTGCATAACCCCGCATTCTGATCCCAGCTTATACGGAGCAGGATCACCGATCATTCACAGCTAATGATCCTTACCAATGTATTGATCTTATTAGCAGGATCCGGCTTATCCACACCCTGTCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATACCCAGGATCCCGGGTCTTTCTCCATCGACTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATAACCgidA
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif GCAGGATCCCGSDT

StartP-valueSite
2825.36e-08TTTTTAATACCCAGGATCCCGGGTCTTTCTCCAT
1915.70e-08GATCTTATTAGCAGGATCCGGCTTATCCACACCC
1351.56e-07CTTATACGGAGCAGGATCACCGATCATTCACAGC
1006.08e-07TTTGAGTTGTGCATAACCCCGCATTCTGATCCCA

Motif AAAGATC

StartP-valueSite
2628.63e-05CTCTAAATAAAAAGATCTTCTTTTTAA
58.63e-05GTGTAAAGATCGTGCGATCGA
2311.46e-04GATCCTAATAAGAGATCACAATAGAAC
2462.19e-04TCACAATAGAACAGATCTCTAAATAAA
1603.03e-04ATTCACAGCTAATGATCCTTACCAATG

Motif GCGATC

StartP-valueSite
2191.76e-04ACACCCTGTCGCGATCCTAATAAGAG
141.76e-04TAAAGATCGTGCGATCGAGTGTGGAT
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI93030277 100.0 378 0 0 1 378 1 378 0.0 699
ORI95020132 91.821 379 29 2 1 378 378 1 0.0 527
ORI10020009 91.821 379 29 2 1 378 378 1 0.0 527
ORI95030469 91.799 378 29 2 2 378 377 1 0.0 525
ORI95030444 91.799 378 29 2 2 378 377 1 0.0 525
ORI95030443 91.799 378 29 2 2 378 377 1 0.0 525
ORI95030442 91.799 378 29 2 2 378 377 1 0.0 525
ORI95020131 91.799 378 29 2 2 378 377 1 0.0 525
ORI95030436 91.799 378 29 2 2 378 377 1 0.0 525
ORI95030441 91.557 379 30 2 1 378 19 396 0.0 521
ORI92720083 91.557 379 30 2 1 378 378 1 0.0 521
ORI92520073 91.557 379 30 2 1 378 378 1 0.0 521
ORI92520064 91.557 379 30 2 1 378 378 1 0.0 521
ORI96000399 91.293 379 31 2 1 378 378 1 0.0 516
ORI92520071 91.293 379 31 2 1 378 1 378 0.0 516
ORI92520068 91.293 379 31 2 1 378 378 1 0.0 516
ORI92520065 91.293 379 31 2 1 378 378 1 0.0 516
ORI92230183 91.293 379 31 2 1 378 378 1 0.0 516
ORI10020023 91.293 379 31 2 1 378 378 1 0.0 516
ORI95020129 91.029 379 32 2 1 378 1 378 0.0 510
ORI92520070 91.029 379 32 2 1 378 378 1 0.0 510
ORI92520067 91.029 379 32 2 1 378 378 1 0.0 510
ORI92520066 91.029 379 32 2 1 378 378 1 0.0 510
ORI92230170 91.421 373 30 2 7 378 372 1 0.0 510
ORI10020021 91.029 379 32 2 1 378 378 1 0.0 510
ORI10020015 91.029 379 32 2 1 378 1 378 0.0 510
ORI10020010 91.029 379 32 2 1 378 1 378 0.0 510
ORI94030400 90.789 380 31 4 1 378 378 1 0.0 505
ORI92230179 90.501 379 33 3 1 378 1 377 0.0 497
ORI96000414 90.642 374 31 4 7 378 372 1 0.0 494
ORI96000401 90.642 374 31 4 7 378 372 1 0.0 494
ORI93020113 90.642 374 31 4 7 378 372 1 0.0 494
ORI94030303 90.642 374 31 4 7 378 372 1 0.0 494
ORI92720080 90.642 374 31 4 7 378 372 1 0.0 494
ORI96000422 90.374 374 32 4 7 378 372 1 0.0 488
ORI96000411 90.374 374 32 4 7 378 372 1 0.0 488
ORI96000408 90.374 374 32 4 7 378 372 1 0.0 488
ORI96000405 90.374 374 32 4 7 378 372 1 0.0 488
ORI96000400 90.0 380 34 4 1 378 1 378 0.0 488
ORI93020099 90.374 374 32 4 7 378 372 1 0.0 488
ORI93020090 90.374 374 32 4 7 378 372 1 0.0 488
ORI94030302 90.374 374 32 4 7 378 372 1 0.0 488
ORI92720076 90.374 374 32 4 7 378 372 1 0.0 488
ORI92320059 90.374 374 32 4 7 378 372 1 0.0 488
ORI92330196 90.374 374 32 4 7 378 372 1 0.0 488
ORI92220052 90.374 374 32 4 7 378 372 1 0.0 488
ORI96000364 90.0 380 34 4 1 378 1 378 0.0 488
ORI10020005 90.374 374 32 4 7 378 372 1 0.0 488
ORI10020004 90.374 374 32 4 7 378 372 1 0.0 488
ORI10020002 90.374 374 32 4 7 378 372 1 0.0 488
ORI10020001 90.0 380 34 4 1 378 1 378 0.0 488
ORI96000438 89.737 380 35 4 1 378 1 378 0.0 483
ORI96000437 89.737 380 35 4 1 378 1 378 0.0 483
ORI96000436 89.737 380 35 4 1 378 1 378 0.0 483
ORI96000416 90.107 374 33 4 7 378 372 1 0.0 483
ORI96000409 90.107 374 33 4 7 378 372 1 0.0 483
ORI96000406 90.107 374 33 4 7 378 372 1 0.0 483
ORI96000368 90.107 374 33 4 7 378 372 1 0.0 483
ORI93020102 89.737 380 35 4 1 378 1 378 0.0 483
ORI96000367 90.107 374 33 4 7 378 372 1 0.0 483
ORI93020098 90.107 374 33 4 7 378 372 1 0.0 483
ORI93020096 89.737 380 35 4 1 378 1 378 0.0 483
ORI93020093 90.107 374 33 4 7 378 372 1 0.0 483
ORI96000365 90.107 374 33 4 7 378 372 1 0.0 483
ORI94030301 90.107 374 33 4 7 378 372 1 0.0 483
ORI94030298 90.107 374 33 4 7 378 372 1 0.0 483
ORI92720078 90.107 374 33 4 7 378 372 1 0.0 483
ORI92330207 89.737 380 35 4 1 378 1 378 0.0 483
ORI92320058 89.737 380 35 4 1 378 1 378 0.0 483
ORI92220053 90.107 374 33 4 7 378 372 1 0.0 483
ORI10030083 89.737 380 35 4 1 378 1 378 0.0 483
ORI10030070 89.737 380 35 4 1 378 1 378 0.0 483
ORI93020104 90.08 373 34 3 7 378 371 1 0.0 481
ORI96000417 89.84 374 34 4 7 378 372 1 0.0 477
ORI96000415 89.84 374 34 4 7 378 372 1 0.0 477
ORI96000410 89.84 374 34 4 7 378 372 1 0.0 477
ORI96000407 89.84 374 34 4 7 378 372 1 0.0 477
ORI96000404 89.84 374 34 4 7 378 372 1 0.0 477
ORI96000402 89.84 374 34 4 7 378 372 1 0.0 477
ORI96000390 89.84 374 34 4 7 378 372 1 0.0 477
ORI95030447 89.474 380 36 4 1 378 1 378 0.0 477
ORI94030299 89.84 374 34 4 7 378 372 1 0.0 477
ORI92720079 89.84 374 34 4 7 378 372 1 0.0 477
ORI50020036 89.84 374 34 4 7 378 372 1 0.0 477
ORI30020033 89.84 374 34 4 7 378 372 1 0.0 477
ORI10020028 89.84 374 34 4 7 378 372 1 0.0 477
ORI10030036 89.474 380 36 4 1 378 1 378 0.0 477
ORI10030030 89.84 374 34 4 7 378 372 1 0.0 477
ORI93020103 89.446 379 37 3 1 378 1 377 0.0 475
ORI96000413 89.572 374 35 4 7 378 372 1 0.0 472
ORI96000412 89.572 374 35 4 7 378 372 1 0.0 472
ORI96000403 89.572 374 35 4 7 378 372 1 0.0 472
ORI30020034 89.572 374 35 4 7 378 453 82 0.0 472
ORI10020012 89.572 374 35 4 7 378 372 1 0.0 472
ORI94030300 89.305 374 36 4 7 378 372 1 0.0 466
ORI10030084 88.947 380 38 4 1 378 1 378 0.0 466
ORI96000434 87.399 373 42 4 2 372 5 374 0.0 424
ORI95020130 87.399 373 42 4 2 372 377 8 0.0 424
ORI93020089 87.399 373 42 4 2 372 377 8 0.0 424
ORI92020049 87.399 373 42 4 2 372 377 8 0.0 424
ORI96000393 87.131 373 43 4 2 372 377 8 0.0 418
ORI94030323 86.772 378 40 10 1 372 4 377 0.0 412
ORI96000432 86.29 372 40 11 7 372 1 367 0.0 394
ORI94030388 86.111 360 43 7 23 378 357 1 0.0 381
ORI93020111 85.0 380 51 5 2 378 5 381 0.0 381
ORI92520072 85.0 380 51 5 2 378 5 381 0.0 381
ORI93020120 84.14 372 48 10 7 372 1 367 0.0 350
ORI96000429 83.602 372 50 10 7 372 1 367 0.0 339
ORI95020123 83.243 370 55 7 7 372 1 367 0.0 333
ORI95020126 82.749 371 55 9 7 372 1 367 0.0 322
ORI96000423 82.253 293 44 7 49 337 43 331 0.0 246
ORI93020110 79.904 209 30 12 88 290 88 290 3.42e-35 143