RefSeq NC_015761.1
Accession number NC_015761.1
DoriC accession number ORI94030400
OriC length 378 nt
OriC AT content 0.55291
The location of oriC region 3766944..3767321 nt
Browse in NCBI
OriC map
OriC sequences
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCTGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCAGAGGGCTGTGGATAACCCGGATCCTGCAATTAAGATCAAGACGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACAGGGAGTTATGCACAACTCAAAAAGTGATCTCGGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCTACCAGATTTATCCACAACTGATTGCGCGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCTGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCAGAGGGCTGTGGATAACCCGGATCCTGCAATTAAGATCAAGACGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACAGGGAGTTATGCACAACTCAAAAAGTGATCTCGGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCTACCAGATTTATCCACAACTGATTGCGCGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCTGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCAGAGGGCTGTGGATAACCCGGATCCTGCAATTAAGATCAAGACGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACAGGGAGTTATGCACAACTCAAAAAGTGATCTCGGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCTACCAGATTTATCCACAACTGATTGCGCGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCTGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCAGAGGGCTGTGGATAACCCGGATCCTGCAATTAAGATCAAGACGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACAGGGAGTTATGCACAACTCAAAAAGTGATCTCGGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCTACCAGATTTATCCACAACTGATTGCGCGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCTGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCAGAGGGCTGTGGATAACCCGGATCCTGCAATTAAGATCAAGACGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACAGGGAGTTATGCACAACTCAAAAAGTGATCTCGGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCTACCAGATTTATCCACAACTGATTGCGCGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCTGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCAGAGGGCTGTGGATAACCCGGATCCTGCAATTAAGATCAAGACGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACAGGGAGTTATGCACAACTCAAAAAGTGATCTCGGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCTACCAGATTTATCCACAACTGATTGCGCGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCTGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCAGAGGGCTGTGGATAACCCGGATCCTGCAATTAAGATCAAGACGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACAGGGAGTTATGCACAACTCAAAAAGTGATCTCGGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCTACCAGATTTATCCACAACTGATTGCGCGATCTTTACACmioC
gidaGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCTGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCAGAGGGCTGTGGATAACCCGGATCCTGCAATTAAGATCAAGACGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACAGGGAGTTATGCACAACTCAAAAAGTGATCTCGGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCTACCAGATTTATCCACAACTGATTGCGCGATCTTTACACmioc
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCTGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCAGAGGGCTGTGGATAACCCGGATCCTGCAATTAAGATCAAGACGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACAGGGAGTTATGCACAACTCAAAAAGTGATCTCGGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCTACCAGATTTATCCACAACTGATTGCGCGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCTGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCAGAGGGCTGTGGATAACCCGGATCCTGCAATTAAGATCAAGACGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACAGGGAGTTATGCACAACTCAAAAAGTGATCTCGGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCTACCAGATTTATCCACAACTGATTGCGCGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCTGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCAGAGGGCTGTGGATAACCCGGATCCTGCAATTAAGATCAAGACGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACAGGGAGTTATGCACAACTCAAAAAGTGATCTCGGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCTACCAGATTTATCCACAACTGATTGCGCGATCTTTACACmioC
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif CSSKGATCSTGSM

StartP-valueSite
866.30e-09GGAGAAAGCCCCGGGATCCTGGCTATTAAAAAG
1771.81e-07CTGTGGATAACCCGGATCCTGCAATTAAGATCA
2332.98e-07TGTGAATGATCGGTGATCGTGGCCCGTATAAGC

Motif GVATMACKVGCKGTGRA

StartP-valueSite
2124.80e-10ACGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGA
3124.92e-08GTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTT
135.83e-08TAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGA
389.33e-08AAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAA

Motif GHGATCT

StartP-valueSite
2921.44e-04AACTCAAAAAGTGATCTCGGGTTATTC
1401.44e-04CTGTTCTATTGTGATCTCTTATTAGGA
1251.44e-04TTTTTATTTAGAGATCTGTTCTATTGT
3661.96e-04AACTGATTGCGCGATCTTTACAC
1093.54e-04TATTAAAAAGAAGATCTTTTTATTTAG
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI94030400 100.0 378 0 0 1 378 1 378 0.0 699
ORI92520068 94.444 378 21 0 1 378 1 378 0.0 582
ORI92520066 94.444 378 21 0 1 378 1 378 0.0 582
ORI96000399 94.18 378 22 0 1 378 1 378 0.0 577
ORI95030441 94.18 378 22 0 1 378 396 19 0.0 577
ORI92720083 94.18 378 22 0 1 378 1 378 0.0 577
ORI92520073 94.18 378 22 0 1 378 1 378 0.0 577
ORI92520067 94.18 378 22 0 1 378 1 378 0.0 577
ORI92520065 94.18 378 22 0 1 378 1 378 0.0 577
ORI92520064 94.18 378 22 0 1 378 1 378 0.0 577
ORI10020021 94.18 378 22 0 1 378 1 378 0.0 577
ORI95020132 93.915 378 23 0 1 378 1 378 0.0 571
ORI95020129 93.915 378 23 0 1 378 378 1 0.0 571
ORI92520071 93.915 378 23 0 1 378 378 1 0.0 571
ORI92230183 93.947 380 19 3 1 378 1 378 0.0 571
ORI10020023 93.915 378 23 0 1 378 1 378 0.0 571
ORI10020015 93.915 378 23 0 1 378 378 1 0.0 571
ORI10020010 93.915 378 23 0 1 378 378 1 0.0 571
ORI10020009 93.915 378 23 0 1 378 1 378 0.0 571
ORI95030469 93.899 377 23 0 1 377 1 377 0.0 569
ORI95030444 93.899 377 23 0 1 377 1 377 0.0 569
ORI95030443 93.899 377 23 0 1 377 1 377 0.0 569
ORI95030442 93.899 377 23 0 1 377 1 377 0.0 569
ORI95020131 93.899 377 23 0 1 377 1 377 0.0 569
ORI95030436 93.899 377 23 0 1 377 1 377 0.0 569
ORI92520070 93.651 378 24 0 1 378 1 378 0.0 566
ORI92230179 92.084 379 27 3 1 378 377 1 0.0 531
ORI93030277 90.814 381 29 6 1 378 378 1 0.0 505
ORI92230170 88.564 376 35 8 1 372 1 372 0.0 449
ORI96000414 86.863 373 47 2 1 372 1 372 0.0 416
ORI93020113 86.863 373 47 2 1 372 1 372 0.0 416
ORI92720080 86.863 373 47 2 1 372 1 372 0.0 416
ORI96000422 86.595 373 48 2 1 372 1 372 0.0 411
ORI96000411 86.595 373 48 2 1 372 1 372 0.0 411
ORI96000408 86.595 373 48 2 1 372 1 372 0.0 411
ORI96000405 86.595 373 48 2 1 372 1 372 0.0 411
ORI96000401 86.595 373 48 2 1 372 1 372 0.0 411
ORI96000400 86.28 379 50 2 1 378 378 1 0.0 411
ORI93020099 86.595 373 48 2 1 372 1 372 0.0 411
ORI93020090 86.595 373 48 2 1 372 1 372 0.0 411
ORI94030303 86.595 373 48 2 1 372 1 372 0.0 411
ORI94030302 86.595 373 48 2 1 372 1 372 0.0 411
ORI92720076 86.595 373 48 2 1 372 1 372 0.0 411
ORI92320059 86.595 373 48 2 1 372 1 372 0.0 411
ORI92330196 86.595 373 48 2 1 372 1 372 0.0 411
ORI92220052 86.595 373 48 2 1 372 1 372 0.0 411
ORI96000364 86.28 379 50 2 1 378 378 1 0.0 411
ORI10020005 86.595 373 48 2 1 372 1 372 0.0 411
ORI10020004 86.595 373 48 2 1 372 1 372 0.0 411
ORI10020002 86.595 373 48 2 1 372 1 372 0.0 411
ORI10020001 86.28 379 50 2 1 378 378 1 0.0 411
ORI96000438 86.016 379 51 2 1 378 378 1 0.0 405
ORI96000437 86.016 379 51 2 1 378 378 1 0.0 405
ORI96000436 86.016 379 51 2 1 378 378 1 0.0 405
ORI96000416 86.327 373 49 2 1 372 1 372 0.0 405
ORI96000410 86.327 373 49 2 1 372 1 372 0.0 405
ORI96000409 86.327 373 49 2 1 372 1 372 0.0 405
ORI96000368 86.327 373 49 2 1 372 1 372 0.0 405
ORI93020102 86.016 379 51 2 1 378 378 1 0.0 405
ORI96000367 86.327 373 49 2 1 372 1 372 0.0 405
ORI93020098 86.327 373 49 2 1 372 1 372 0.0 405
ORI93020096 86.016 379 51 2 1 378 378 1 0.0 405
ORI93020093 86.327 373 49 2 1 372 1 372 0.0 405
ORI94030301 86.327 373 49 2 1 372 1 372 0.0 405
ORI94030298 86.327 373 49 2 1 372 1 372 0.0 405
ORI92720078 86.327 373 49 2 1 372 1 372 0.0 405
ORI92330207 86.016 379 51 2 1 378 378 1 0.0 405
ORI92320058 86.016 379 51 2 1 378 378 1 0.0 405
ORI92220053 86.327 373 49 2 1 372 1 372 0.0 405
ORI30020033 86.327 373 49 2 1 372 1 372 0.0 405
ORI10030083 86.016 379 51 2 1 378 378 1 0.0 405
ORI96000417 86.059 373 50 2 1 372 1 372 0.0 399
ORI96000415 86.059 373 50 2 1 372 1 372 0.0 399
ORI96000413 86.059 373 50 2 1 372 1 372 0.0 399
ORI96000412 86.059 373 50 2 1 372 1 372 0.0 399
ORI96000407 86.059 373 50 2 1 372 1 372 0.0 399
ORI96000406 86.059 373 50 2 1 372 1 372 0.0 399
ORI96000404 86.059 373 50 2 1 372 1 372 0.0 399
ORI96000403 86.059 373 50 2 1 372 1 372 0.0 399
ORI96000402 86.059 373 50 2 1 372 1 372 0.0 399
ORI96000390 86.096 374 48 4 1 372 1 372 0.0 399
ORI95030447 85.752 379 52 2 1 378 378 1 0.0 399
ORI96000365 86.059 373 50 2 1 372 1 372 0.0 399
ORI94030299 86.059 373 50 2 1 372 1 372 0.0 399
ORI92720079 86.059 373 50 2 1 372 1 372 0.0 399
ORI50020036 86.059 373 50 2 1 372 1 372 0.0 399
ORI10020028 86.059 373 50 2 1 372 1 372 0.0 399
ORI10030070 85.752 379 52 2 1 378 378 1 0.0 399
ORI10030036 85.789 380 50 4 1 378 378 1 0.0 399
ORI10020012 86.059 373 50 2 1 372 1 372 0.0 399
ORI10030030 86.096 374 48 4 1 372 1 372 0.0 399
ORI93020104 86.059 373 49 3 1 372 1 371 0.0 398
ORI30020034 86.872 358 43 4 1 356 82 437 0.0 398
ORI93020103 85.526 380 50 5 1 378 377 1 0.0 392
ORI10030084 86.555 357 46 2 1 356 378 23 0.0 392
ORI94030300 85.523 373 52 2 1 372 1 372 0.0 388
ORI94030323 84.392 378 49 10 7 378 377 4 0.0 363
ORI96000432 84.054 370 52 7 7 372 367 1 0.0 350
ORI94030388 83.636 385 49 14 1 377 1 379 0.0 350
ORI96000434 83.777 376 50 10 7 377 374 5 0.0 346
ORI95020130 83.777 376 50 10 7 377 8 377 0.0 346
ORI93020089 83.777 376 50 10 7 377 8 377 0.0 346
ORI92020049 83.777 376 50 10 7 377 8 377 0.0 346
ORI96000393 83.511 376 51 10 7 377 8 377 0.0 340
ORI96000429 83.333 372 51 10 7 372 367 1 0.0 333
ORI95020126 83.422 374 47 12 7 372 367 1 0.0 333
ORI93020120 83.243 370 55 7 7 372 367 1 0.0 333
ORI93020111 82.857 385 50 15 1 377 381 5 0.0 331
ORI92520072 82.552 384 53 13 1 377 381 5 0.0 326
ORI95020123 82.385 369 60 5 7 372 367 1 0.0 316
ORI96000423 82.759 290 48 2 42 330 331 43 0.0 257
ORI94030317 77.366 243 45 10 89 326 90 327 5.72e-33 135