RefSeq NC_007606.1
Accession number NC_007606.1
DoriC accession number ORI10030083
OriC length 378 nt
OriC AT content 0.568783
The location of oriC region 3740583..3740960 nt
Browse in NCBI
OriC map
OriC sequences
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAAGAACAACTGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGTCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAAGAACAACTGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGTCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAAGAACAACTGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGTCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAAGAACAACTGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGTCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAAGAACAACTGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGTCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAAGAACAACTGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGTCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAAGAACAACTGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGTCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
miocGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAAGAACAACTGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGTCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgida
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAAGAACAACTGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGTCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAAGAACAACTGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGTCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAAGAACAACTGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGTCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif YCCAGG

StartP-valueSite
2891.40e-04TACCCAGGATCCCAGGTCTTTCTCAA
2811.40e-04CTTTTTAATACCCAGGATCCCAGGTC
1703.12e-04AATGATCCTTTCCAGGTTGTTGATCT
1343.12e-04GCTTATACGGTCCAGGATCACCGATC
3324.11e-04GAATCCACGGCCCGGGCTTCAATCCA

Motif ATCCACAG

StartP-valueSite
2051.59e-05GATCCTTGTTATCCACAGGGCAGTGCGA
3242.72e-05GTTGAGTAGAATCCACGGCCCGGGCTTC
647.82e-05ACCGGTAGTTATCCAAAGAACAACTGTT
1509.78e-05ATCACCGATCATTCACAGTTAATGATCC
501.70e-04GGAAGCTTGGATCAACCGGTAGTTATCC

Motif GATCYT

StartP-valueSite
2212.56e-04AGGGCAGTGCGATCCTAATAAGAGAT
1952.56e-04TTAAAAGTCGGATCCTTGTTATCCAC
1632.56e-04CACAGTTAATGATCCTTTCCAGGTTG
2655.72e-04TAAATAAATAGATCTTCTTTTTAATA
1815.72e-04CCAGGTTGTTGATCTTAAAAGTCGGA
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI10030083 100.0 378 0 0 1 378 1 378 0.0 699
ORI96000408 99.735 378 1 0 1 378 378 1 0.0 693
ORI96000405 99.735 378 1 0 1 378 378 1 0.0 693
ORI96000400 99.735 378 1 0 1 378 1 378 0.0 693
ORI93020090 99.735 378 1 0 1 378 378 1 0.0 693
ORI92330196 99.735 378 1 0 1 378 378 1 0.0 693
ORI96000364 99.735 378 1 0 1 378 1 378 0.0 693
ORI10020002 99.735 378 1 0 1 378 378 1 0.0 693
ORI10020001 99.735 378 1 0 1 378 1 378 0.0 693
ORI96000414 99.471 378 2 0 1 378 378 1 0.0 688
ORI93020113 99.471 378 2 0 1 378 378 1 0.0 688
ORI96000368 99.471 378 2 0 1 378 378 1 0.0 688
ORI92720080 99.471 378 2 0 1 378 378 1 0.0 688
ORI96000438 99.206 378 3 0 1 378 1 378 0.0 682
ORI96000437 99.206 378 3 0 1 378 1 378 0.0 682
ORI96000436 99.206 378 3 0 1 378 1 378 0.0 682
ORI96000422 99.206 378 3 0 1 378 378 1 0.0 682
ORI96000416 99.206 378 3 0 1 378 378 1 0.0 682
ORI96000411 99.206 378 3 0 1 378 378 1 0.0 682
ORI96000409 99.206 378 3 0 1 378 378 1 0.0 682
ORI96000390 99.206 378 3 0 1 378 378 1 0.0 682
ORI93020102 99.206 378 3 0 1 378 1 378 0.0 682
ORI93020099 99.206 378 3 0 1 378 378 1 0.0 682
ORI96000367 99.206 378 3 0 1 378 378 1 0.0 682
ORI93020098 99.206 378 3 0 1 378 378 1 0.0 682
ORI93020096 99.206 378 3 0 1 378 1 378 0.0 682
ORI93020093 99.206 378 3 0 1 378 378 1 0.0 682
ORI94030302 99.206 378 3 0 1 378 378 1 0.0 682
ORI94030301 99.206 378 3 0 1 378 378 1 0.0 682
ORI94030298 99.206 378 3 0 1 378 378 1 0.0 682
ORI92720078 99.206 378 3 0 1 378 378 1 0.0 682
ORI92720076 99.206 378 3 0 1 378 378 1 0.0 682
ORI92330207 99.206 378 3 0 1 378 1 378 0.0 682
ORI92320059 99.206 378 3 0 1 378 378 1 0.0 682
ORI92320058 99.206 378 3 0 1 378 1 378 0.0 682
ORI92220053 99.206 378 3 0 1 378 378 1 0.0 682
ORI10030036 99.206 378 3 0 1 378 1 378 0.0 682
ORI10030030 99.206 378 3 0 1 378 378 1 0.0 682
ORI10020005 99.206 378 3 0 1 378 378 1 0.0 682
ORI10020004 99.206 378 3 0 1 378 378 1 0.0 682
ORI96000417 98.942 378 4 0 1 378 378 1 0.0 676
ORI96000415 98.942 378 4 0 1 378 378 1 0.0 676
ORI96000410 98.942 378 4 0 1 378 378 1 0.0 676
ORI96000407 98.942 378 4 0 1 378 378 1 0.0 676
ORI96000406 98.942 378 4 0 1 378 378 1 0.0 676
ORI95030447 98.942 378 4 0 1 378 1 378 0.0 676
ORI96000365 98.942 378 4 0 1 378 378 1 0.0 676
ORI92220052 98.942 378 4 0 1 378 378 1 0.0 676
ORI30020034 98.942 378 4 0 1 378 459 82 0.0 676
ORI30020033 98.942 378 4 0 1 378 378 1 0.0 676
ORI10030070 98.942 378 4 0 1 378 1 378 0.0 676
ORI93020104 98.942 378 3 1 1 378 377 1 0.0 675
ORI96000413 98.677 378 5 0 1 378 378 1 0.0 671
ORI96000412 98.677 378 5 0 1 378 378 1 0.0 671
ORI96000404 98.677 378 5 0 1 378 378 1 0.0 671
ORI96000403 98.677 378 5 0 1 378 378 1 0.0 671
ORI96000402 98.677 378 5 0 1 378 378 1 0.0 671
ORI96000401 98.677 378 5 0 1 378 378 1 0.0 671
ORI94030303 98.677 378 5 0 1 378 378 1 0.0 671
ORI94030299 98.677 378 5 0 1 378 378 1 0.0 671
ORI92720079 98.677 378 5 0 1 378 378 1 0.0 671
ORI50020036 98.677 378 5 0 1 378 378 1 0.0 671
ORI10020028 98.677 378 5 0 1 378 378 1 0.0 671
ORI10020012 98.677 378 5 0 1 378 378 1 0.0 671
ORI93020103 98.677 378 4 1 1 378 1 377 0.0 669
ORI94030300 98.413 378 6 0 1 378 378 1 0.0 665
ORI10030084 98.413 378 6 0 1 378 1 378 0.0 665
ORI93030277 89.737 380 35 4 1 378 1 378 0.0 483
ORI92230170 89.008 373 39 2 7 378 372 1 0.0 460
ORI96000399 86.828 372 49 0 7 378 372 1 0.0 416
ORI92520066 86.828 372 49 0 7 378 372 1 0.0 416
ORI92520065 86.828 372 49 0 7 378 372 1 0.0 416
ORI92520068 86.559 372 50 0 7 378 372 1 0.0 411
ORI95030469 86.29 372 51 0 7 378 372 1 0.0 405
ORI95030444 86.29 372 51 0 7 378 372 1 0.0 405
ORI95020132 86.29 372 51 0 7 378 372 1 0.0 405
ORI95030443 86.29 372 51 0 7 378 372 1 0.0 405
ORI95030442 86.29 372 51 0 7 378 372 1 0.0 405
ORI95020131 86.29 372 51 0 7 378 372 1 0.0 405
ORI95020129 86.016 379 51 2 1 378 1 378 0.0 405
ORI95030441 85.979 378 53 0 1 378 19 396 0.0 405
ORI95030436 86.29 372 51 0 7 378 372 1 0.0 405
ORI94030400 86.327 373 49 2 7 378 372 1 0.0 405
ORI92720083 86.29 372 51 0 7 378 372 1 0.0 405
ORI92520073 86.29 372 51 0 7 378 372 1 0.0 405
ORI92520067 86.29 372 51 0 7 378 372 1 0.0 405
ORI92520064 86.29 372 51 0 7 378 372 1 0.0 405
ORI10020021 86.29 372 51 0 7 378 372 1 0.0 405
ORI10020015 86.016 379 51 2 1 378 1 378 0.0 405
ORI10020010 86.016 379 51 2 1 378 1 378 0.0 405
ORI10020009 86.29 372 51 0 7 378 372 1 0.0 405
ORI94030323 86.207 377 44 8 1 372 4 377 0.0 401
ORI96000434 86.126 382 39 11 4 378 7 381 0.0 399
ORI95020130 86.28 379 38 11 7 378 372 1 0.0 399
ORI93020089 86.28 379 38 11 7 378 372 1 0.0 399
ORI92520071 85.714 378 54 0 1 378 1 378 0.0 399
ORI92230183 86.022 372 52 0 7 378 372 1 0.0 399
ORI92020049 86.28 379 38 11 7 378 372 1 0.0 399
ORI10020023 86.022 372 52 0 7 378 372 1 0.0 399
ORI96000393 86.016 379 39 11 7 378 372 1 0.0 394
ORI92520072 85.864 382 40 13 4 378 7 381 0.0 394
ORI92520070 85.753 372 53 0 7 378 372 1 0.0 394
ORI94030388 86.413 368 37 13 18 378 362 1 0.0 390
ORI93020111 85.602 382 41 13 4 378 7 381 0.0 388
ORI92230179 85.904 376 40 11 9 378 9 377 0.0 388
ORI96000432 84.169 379 48 12 7 378 1 374 0.0 357
ORI95020123 81.963 377 60 8 7 378 1 374 0.0 313
ORI93020120 81.746 378 59 9 7 378 1 374 0.0 307
ORI95020126 81.167 377 63 8 7 378 1 374 0.0 296
ORI96000429 80.952 378 62 10 7 378 1 374 0.0 291
ORI96000423 80.479 292 51 5 49 337 43 331 0.0 219
ORI93020094 77.366 243 44 10 53 290 53 289 2.06e-32 134