RefSeq NC_007613.1
Accession number NC_007613.1
DoriC accession number ORI10030084
OriC length 378 nt
OriC AT content 0.558201
The location of oriC region 3763785..3764162 nt
Browse in NCBI
OriC map
OriC sequences
mioCGTATACAGATCGTGCGTTCTACTGTGGATAACTCTGTCAGGAAGCTTGGTTCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTCCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGTTCTACTGTGGATAACTCTGTCAGGAAGCTTGGTTCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTCCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGTTCTACTGTGGATAACTCTGTCAGGAAGCTTGGTTCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTCCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGTTCTACTGTGGATAACTCTGTCAGGAAGCTTGGTTCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTCCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGTTCTACTGTGGATAACTCTGTCAGGAAGCTTGGTTCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTCCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGTTCTACTGTGGATAACTCTGTCAGGAAGCTTGGTTCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTCCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGTTCTACTGTGGATAACTCTGTCAGGAAGCTTGGTTCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTCCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
miocGTATACAGATCGTGCGTTCTACTGTGGATAACTCTGTCAGGAAGCTTGGTTCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTCCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgida
mioCGTATACAGATCGTGCGTTCTACTGTGGATAACTCTGTCAGGAAGCTTGGTTCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTCCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGTTCTACTGTGGATAACTCTGTCAGGAAGCTTGGTTCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTCCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGTTCTACTGTGGATAACTCTGTCAGGAAGCTTGGTTCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTCCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif AGGAWCMHCGGTY

StartP-valueSite
2841.63e-07TTTAATACCCAGGATCCCAGGTCTTTCTCAAGC
692.67e-07TAGTTATCCAAGGAACAACGGTTGTTCAGTTTT
1378.01e-07TATACGGTCCAGGATCACCGATCATTCACAGTT
3212.01e-06AAAGTTGAGTAGAATCCACGGCCCGGGCTTCAA
395.33e-06TAACTCTGTCAGGAAGCTTGGTTCAACCGGTAG

Motif ABAGATC

StartP-valueSite
2466.65e-05TCACAATAGAACAGATCTCTAAATAAA
56.65e-05GTATACAGATCGTGCGTTCTA
2311.22e-04GATCCTAATAAGAGATCACAATAGAAC
2622.02e-04CTCTAAATAAATAGATCTCCTTTTTAA

Motif GATCCT

StartP-valueSite
2212.63e-04AGGGCAGTGCGATCCTAATAAGAGAT
1952.63e-04TTAAAAGCCGGATCCTTGTTATCCAC
1632.63e-04CACAGTTAATGATCCTTTCCAGGTTG
1174.83e-04CCCTCATTCTGATCCCAGCTTATACG
1817.97e-04CCAGGTTGTTGATCTTAAAAGCCGGA
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI10030084 100.0 378 0 0 1 378 1 378 0.0 699
ORI96000416 99.206 378 3 0 1 378 378 1 0.0 682
ORI96000409 99.206 378 3 0 1 378 378 1 0.0 682
ORI93020102 99.206 378 3 0 1 378 1 378 0.0 682
ORI96000367 99.206 378 3 0 1 378 378 1 0.0 682
ORI93020098 99.206 378 3 0 1 378 378 1 0.0 682
ORI93020096 99.206 378 3 0 1 378 1 378 0.0 682
ORI93020093 99.206 378 3 0 1 378 378 1 0.0 682
ORI94030298 99.206 378 3 0 1 378 378 1 0.0 682
ORI92330207 99.206 378 3 0 1 378 1 378 0.0 682
ORI92320058 99.206 378 3 0 1 378 1 378 0.0 682
ORI96000417 98.942 378 4 0 1 378 378 1 0.0 676
ORI96000415 98.942 378 4 0 1 378 378 1 0.0 676
ORI96000407 98.942 378 4 0 1 378 378 1 0.0 676
ORI95030447 98.942 378 4 0 1 378 1 378 0.0 676
ORI92220052 98.942 378 4 0 1 378 378 1 0.0 676
ORI10030070 98.942 378 4 0 1 378 1 378 0.0 676
ORI93020104 98.942 378 3 1 1 378 377 1 0.0 675
ORI96000438 98.677 378 5 0 1 378 1 378 0.0 671
ORI96000437 98.677 378 5 0 1 378 1 378 0.0 671
ORI96000436 98.677 378 5 0 1 378 1 378 0.0 671
ORI96000414 98.677 378 5 0 1 378 378 1 0.0 671
ORI96000411 98.677 378 5 0 1 378 378 1 0.0 671
ORI96000408 98.677 378 5 0 1 378 378 1 0.0 671
ORI96000405 98.677 378 5 0 1 378 378 1 0.0 671
ORI96000400 98.677 378 5 0 1 378 1 378 0.0 671
ORI93020113 98.677 378 5 0 1 378 378 1 0.0 671
ORI93020090 98.677 378 5 0 1 378 378 1 0.0 671
ORI94030302 98.677 378 5 0 1 378 378 1 0.0 671
ORI94030301 98.677 378 5 0 1 378 378 1 0.0 671
ORI92720080 98.677 378 5 0 1 378 378 1 0.0 671
ORI92720078 98.677 378 5 0 1 378 378 1 0.0 671
ORI92320059 98.677 378 5 0 1 378 378 1 0.0 671
ORI92330196 98.677 378 5 0 1 378 378 1 0.0 671
ORI92220053 98.677 378 5 0 1 378 378 1 0.0 671
ORI96000364 98.677 378 5 0 1 378 1 378 0.0 671
ORI10020002 98.677 378 5 0 1 378 378 1 0.0 671
ORI10020001 98.677 378 5 0 1 378 1 378 0.0 671
ORI93020103 98.677 378 4 1 1 378 1 377 0.0 669
ORI96000422 98.413 378 6 0 1 378 378 1 0.0 665
ORI96000410 98.413 378 6 0 1 378 378 1 0.0 665
ORI96000406 98.413 378 6 0 1 378 378 1 0.0 665
ORI96000368 98.413 378 6 0 1 378 378 1 0.0 665
ORI93020099 98.413 378 6 0 1 378 378 1 0.0 665
ORI96000365 98.413 378 6 0 1 378 378 1 0.0 665
ORI92720076 98.413 378 6 0 1 378 378 1 0.0 665
ORI30020033 98.413 378 6 0 1 378 378 1 0.0 665
ORI10030083 98.413 378 6 0 1 378 1 378 0.0 665
ORI10020005 98.413 378 6 0 1 378 378 1 0.0 665
ORI10020004 98.413 378 6 0 1 378 378 1 0.0 665
ORI96000413 98.148 378 7 0 1 378 378 1 0.0 660
ORI96000412 98.148 378 7 0 1 378 378 1 0.0 660
ORI96000404 98.148 378 7 0 1 378 378 1 0.0 660
ORI96000403 98.148 378 7 0 1 378 378 1 0.0 660
ORI96000402 98.148 378 7 0 1 378 378 1 0.0 660
ORI94030299 98.148 378 7 0 1 378 378 1 0.0 660
ORI92720079 98.148 378 7 0 1 378 378 1 0.0 660
ORI50020036 98.148 378 7 0 1 378 378 1 0.0 660
ORI30020034 98.148 378 7 0 1 378 459 82 0.0 660
ORI10020028 98.148 378 7 0 1 378 378 1 0.0 660
ORI10020012 98.148 378 7 0 1 378 378 1 0.0 660
ORI96000401 97.884 378 8 0 1 378 378 1 0.0 654
ORI96000390 97.884 378 8 0 1 378 378 1 0.0 654
ORI94030303 97.884 378 8 0 1 378 378 1 0.0 654
ORI94030300 97.884 378 8 0 1 378 378 1 0.0 654
ORI10030036 97.884 378 8 0 1 378 1 378 0.0 654
ORI10030030 97.884 378 8 0 1 378 378 1 0.0 654
ORI93030277 88.947 380 38 4 1 378 1 378 0.0 466
ORI96000399 86.022 372 52 0 7 378 372 1 0.0 399
ORI92520067 86.022 372 52 0 7 378 372 1 0.0 399
ORI92520066 86.022 372 52 0 7 378 372 1 0.0 399
ORI92520065 86.022 372 52 0 7 378 372 1 0.0 399
ORI10020021 86.022 372 52 0 7 378 372 1 0.0 399
ORI94030323 85.942 377 45 8 1 372 4 377 0.0 396
ORI92520068 85.753 372 53 0 7 378 372 1 0.0 394
ORI94030400 86.555 357 46 2 23 378 356 1 0.0 392
ORI95030469 85.484 372 54 0 7 378 372 1 0.0 388
ORI95030444 85.484 372 54 0 7 378 372 1 0.0 388
ORI95020132 85.484 372 54 0 7 378 372 1 0.0 388
ORI95030443 85.484 372 54 0 7 378 372 1 0.0 388
ORI95030442 85.484 372 54 0 7 378 372 1 0.0 388
ORI95020131 85.484 372 54 0 7 378 372 1 0.0 388
ORI95020129 85.224 379 54 2 1 378 1 378 0.0 388
ORI95030441 85.185 378 56 0 1 378 19 396 0.0 388
ORI95030436 85.484 372 54 0 7 378 372 1 0.0 388
ORI92720083 85.484 372 54 0 7 378 372 1 0.0 388
ORI92520073 85.484 372 54 0 7 378 372 1 0.0 388
ORI92520064 85.484 372 54 0 7 378 372 1 0.0 388
ORI10020015 85.224 379 54 2 1 378 1 378 0.0 388
ORI10020010 85.224 379 54 2 1 378 1 378 0.0 388
ORI10020009 85.484 372 54 0 7 378 372 1 0.0 388
ORI92520071 84.921 378 57 0 1 378 1 378 0.0 383
ORI92230183 85.215 372 55 0 7 378 372 1 0.0 383
ORI10020023 85.215 372 55 0 7 378 372 1 0.0 383
ORI96000434 85.079 382 43 11 4 378 7 381 0.0 377
ORI95020130 85.224 379 42 11 7 378 372 1 0.0 377
ORI93020089 85.224 379 42 11 7 378 372 1 0.0 377
ORI92520070 84.946 372 56 0 7 378 372 1 0.0 377
ORI92020049 85.224 379 42 11 7 378 372 1 0.0 377
ORI96000393 84.96 379 43 12 7 378 372 1 0.0 372
ORI92230179 85.027 374 47 8 9 378 9 377 0.0 372
ORI94030388 85.366 369 41 13 17 378 363 1 0.0 370
ORI92520072 84.514 381 47 11 4 378 7 381 0.0 366
ORI93020111 84.252 381 48 11 4 378 7 381 0.0 361
ORI96000432 83.113 379 52 12 7 378 1 374 0.0 335
ORI95020123 81.163 361 60 8 23 378 17 374 0.0 283
ORI93020120 81.215 362 58 9 23 378 17 374 0.0 283
ORI95020126 80.939 362 59 10 23 378 17 374 0.0 278
ORI96000429 80.716 363 58 12 23 378 17 374 0.0 272
ORI96000423 80.0 290 52 5 51 337 45 331 0.0 209
ORI93020094 76.543 243 46 10 53 290 53 289 4.45e-29 122