RefSeq NC_011745.1
Accession number NC_011745.1
DoriC accession number ORI94030300
OriC length 378 nt
OriC AT content 0.574074
The location of oriC region 4362439..4362816 nt
Browse in NCBI
OriC map
OriC sequences
gidAGGTGATTGCCTCGCATAAAGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAAGATCGCACTGCCCTGTGGATAACAAGTATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATTAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAAAGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAAGATCGCACTGCCCTGTGGATAACAAGTATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATTAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAAAGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAAGATCGCACTGCCCTGTGGATAACAAGTATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATTAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAAAGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAAGATCGCACTGCCCTGTGGATAACAAGTATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATTAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAAAGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAAGATCGCACTGCCCTGTGGATAACAAGTATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATTAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAAAGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAAGATCGCACTGCCCTGTGGATAACAAGTATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATTAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAAAGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAAGATCGCACTGCCCTGTGGATAACAAGTATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATTAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
gidaGGTGATTGCCTCGCATAAAGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAAGATCGCACTGCCCTGTGGATAACAAGTATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATTAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioc
gidAGGTGATTGCCTCGCATAAAGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAAGATCGCACTGCCCTGTGGATAACAAGTATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATTAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAAAGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAAGATCGCACTGCCCTGTGGATAACAAGTATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATTAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAAAGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAAGATCGCACTGCCCTGTGGATAACAAGTATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATTAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif CCTGGR

StartP-valueSite
931.35e-04GACCTGGGATCCTGGGTATTAAAAAG
851.35e-04TTGAGAAAGACCTGGGATCCTGGGTA
2403.03e-04GATCGGTGATCCTGGACCGTATAAGC
2043.03e-04AGATCAACAACCTGGAAAGGATCATT
423.95e-04TGGATTGAAGCCCGGGCCGTGGATTC

Motif CTGTGGAT

StartP-valueSite
1671.62e-05TCGCACTGCCCTGTGGATAACAAGTATC
482.73e-05GAAGCCCGGGCCGTGGATTCTACTCAAC
3087.99e-05AACCGTTGTTCTTTGGATAACTACCGGT
2221.00e-04GGATCATTAACTGTGAATGATCGGTGAT
3221.73e-04GGATAACTACCGGTTGATCCAAGCTTCC

Motif GATCTVT

StartP-valueSite
3686.95e-05TAGATCGCACGATCTGTATAC
1276.95e-05TTTATTTAGAGATCTGTTCTATTGTGA
1421.27e-04GTTCTATTGTGATCTCTTATTAAGATC
1112.14e-04TTAAAAAGAAGATCTATTTATTTAGAG
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI94030300 100.0 378 0 0 1 378 1 378 0.0 699
ORI96000438 98.677 378 5 0 1 378 378 1 0.0 671
ORI96000437 98.677 378 5 0 1 378 378 1 0.0 671
ORI96000436 98.677 378 5 0 1 378 378 1 0.0 671
ORI96000416 98.677 378 5 0 1 378 1 378 0.0 671
ORI96000414 98.677 378 5 0 1 378 1 378 0.0 671
ORI96000411 98.677 378 5 0 1 378 1 378 0.0 671
ORI96000409 98.677 378 5 0 1 378 1 378 0.0 671
ORI96000408 98.677 378 5 0 1 378 1 378 0.0 671
ORI96000405 98.677 378 5 0 1 378 1 378 0.0 671
ORI96000404 98.677 378 5 0 1 378 1 378 0.0 671
ORI96000402 98.677 378 5 0 1 378 1 378 0.0 671
ORI96000400 98.677 378 5 0 1 378 378 1 0.0 671
ORI93020113 98.677 378 5 0 1 378 1 378 0.0 671
ORI93020102 98.677 378 5 0 1 378 378 1 0.0 671
ORI96000367 98.677 378 5 0 1 378 1 378 0.0 671
ORI93020098 98.677 378 5 0 1 378 1 378 0.0 671
ORI93020096 98.677 378 5 0 1 378 378 1 0.0 671
ORI93020093 98.677 378 5 0 1 378 1 378 0.0 671
ORI93020090 98.677 378 5 0 1 378 1 378 0.0 671
ORI94030302 98.677 378 5 0 1 378 1 378 0.0 671
ORI94030301 98.677 378 5 0 1 378 1 378 0.0 671
ORI94030299 98.677 378 5 0 1 378 1 378 0.0 671
ORI94030298 98.677 378 5 0 1 378 1 378 0.0 671
ORI92720080 98.677 378 5 0 1 378 1 378 0.0 671
ORI92720078 98.677 378 5 0 1 378 1 378 0.0 671
ORI92330207 98.677 378 5 0 1 378 378 1 0.0 671
ORI92320059 98.677 378 5 0 1 378 1 378 0.0 671
ORI92330196 98.677 378 5 0 1 378 1 378 0.0 671
ORI92320058 98.677 378 5 0 1 378 378 1 0.0 671
ORI92220053 98.677 378 5 0 1 378 1 378 0.0 671
ORI50020036 98.677 378 5 0 1 378 1 378 0.0 671
ORI10020028 98.677 378 5 0 1 378 1 378 0.0 671
ORI96000364 98.677 378 5 0 1 378 378 1 0.0 671
ORI10020002 98.677 378 5 0 1 378 1 378 0.0 671
ORI10020001 98.677 378 5 0 1 378 378 1 0.0 671
ORI96000422 98.413 378 6 0 1 378 1 378 0.0 665
ORI96000417 98.413 378 6 0 1 378 1 378 0.0 665
ORI96000415 98.413 378 6 0 1 378 1 378 0.0 665
ORI96000410 98.413 378 6 0 1 378 1 378 0.0 665
ORI96000407 98.413 378 6 0 1 378 1 378 0.0 665
ORI96000406 98.413 378 6 0 1 378 1 378 0.0 665
ORI95030447 98.413 378 6 0 1 378 378 1 0.0 665
ORI96000368 98.413 378 6 0 1 378 1 378 0.0 665
ORI93020099 98.413 378 6 0 1 378 1 378 0.0 665
ORI96000365 98.413 378 6 0 1 378 1 378 0.0 665
ORI92720076 98.413 378 6 0 1 378 1 378 0.0 665
ORI92220052 98.413 378 6 0 1 378 1 378 0.0 665
ORI30020033 98.413 378 6 0 1 378 1 378 0.0 665
ORI10030083 98.413 378 6 0 1 378 378 1 0.0 665
ORI10030070 98.413 378 6 0 1 378 378 1 0.0 665
ORI10020005 98.413 378 6 0 1 378 1 378 0.0 665
ORI10020004 98.413 378 6 0 1 378 1 378 0.0 665
ORI93020104 98.413 378 5 1 1 378 1 377 0.0 664
ORI96000413 98.148 378 7 0 1 378 1 378 0.0 660
ORI96000412 98.148 378 7 0 1 378 1 378 0.0 660
ORI96000403 98.148 378 7 0 1 378 1 378 0.0 660
ORI92720079 98.148 378 7 0 1 378 1 378 0.0 660
ORI10020012 98.148 378 7 0 1 378 1 378 0.0 660
ORI93020103 98.148 378 6 1 1 378 377 1 0.0 658
ORI96000401 97.884 378 8 0 1 378 1 378 0.0 654
ORI96000390 97.884 378 8 0 1 378 1 378 0.0 654
ORI94030303 97.884 378 8 0 1 378 1 378 0.0 654
ORI10030084 97.884 378 8 0 1 378 378 1 0.0 654
ORI10030036 97.884 378 8 0 1 378 378 1 0.0 654
ORI10030030 97.884 378 8 0 1 378 1 378 0.0 654
ORI30020034 97.619 378 9 0 1 378 82 459 0.0 649
ORI93030277 88.947 380 38 4 1 378 378 1 0.0 466
ORI92230170 88.204 373 42 2 1 372 1 372 0.0 444
ORI96000399 86.022 372 52 0 1 372 1 372 0.0 399
ORI92520066 86.022 372 52 0 1 372 1 372 0.0 399
ORI92520065 86.022 372 52 0 1 372 1 372 0.0 399
ORI92520068 85.753 372 53 0 1 372 1 372 0.0 394
ORI94030323 85.676 377 46 8 7 378 377 4 0.0 390
ORI96000434 85.602 382 41 11 1 375 381 7 0.0 388
ORI95030469 85.484 372 54 0 1 372 1 372 0.0 388
ORI95030444 85.484 372 54 0 1 372 1 372 0.0 388
ORI95020132 85.484 372 54 0 1 372 1 372 0.0 388
ORI95030443 85.484 372 54 0 1 372 1 372 0.0 388
ORI95030442 85.484 372 54 0 1 372 1 372 0.0 388
ORI95020131 85.484 372 54 0 1 372 1 372 0.0 388
ORI95020130 85.752 379 40 11 1 372 1 372 0.0 388
ORI95020129 85.224 379 54 2 1 378 378 1 0.0 388
ORI95030441 85.185 378 56 0 1 378 396 19 0.0 388
ORI95030436 85.484 372 54 0 1 372 1 372 0.0 388
ORI94030400 85.523 373 52 2 1 372 1 372 0.0 388
ORI93020089 85.752 379 40 11 1 372 1 372 0.0 388
ORI92720083 85.484 372 54 0 1 372 1 372 0.0 388
ORI92520073 85.484 372 54 0 1 372 1 372 0.0 388
ORI92520067 85.484 372 54 0 1 372 1 372 0.0 388
ORI92520064 85.484 372 54 0 1 372 1 372 0.0 388
ORI92020049 85.752 379 40 11 1 372 1 372 0.0 388
ORI10020021 85.484 372 54 0 1 372 1 372 0.0 388
ORI10020015 85.224 379 54 2 1 378 378 1 0.0 388
ORI10020010 85.224 379 54 2 1 378 378 1 0.0 388
ORI10020009 85.484 372 54 0 1 372 1 372 0.0 388
ORI96000393 85.488 379 41 11 1 372 1 372 0.0 383
ORI92520071 84.921 378 57 0 1 378 378 1 0.0 383
ORI92230183 85.215 372 55 0 1 372 1 372 0.0 383
ORI10020023 85.215 372 55 0 1 372 1 372 0.0 383
ORI92520070 84.946 372 56 0 1 372 1 372 0.0 377
ORI92230179 85.333 375 44 10 1 370 377 9 0.0 377
ORI92520072 84.514 381 47 11 1 375 381 7 0.0 366
ORI94030388 85.054 368 42 13 1 361 1 362 0.0 363
ORI93020111 84.252 381 48 11 1 375 381 7 0.0 361
ORI96000432 83.684 380 48 14 1 372 374 1 0.0 346
ORI95020123 80.952 378 62 10 1 372 374 1 0.0 291
ORI93020120 81.003 379 60 11 1 372 374 1 0.0 291
ORI96000429 80.679 383 54 14 1 372 374 1 0.0 279
ORI95020126 80.475 379 62 12 1 372 374 1 0.0 279
ORI96000423 79.795 292 53 5 42 330 331 43 0.0 207
ORI93020094 76.132 243 47 10 89 326 289 53 2.07e-27 117
ORI94030322 74.744 293 54 16 45 326 390 107 2.68e-26 113