RefSeq NC_011083.1
Accession number NC_011083.1
DoriC accession number ORI92520065
OriC length 378 nt
OriC AT content 0.558201
The location of oriC region 4093679..4094056 nt
Browse in NCBI
OriC map
OriC sequences
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGAGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGAGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGAGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGAGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGAGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGAGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGAGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
gidaGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGAGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioc
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGAGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGAGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
gidAGGTAATTGCCTCGCATAACGCGGTGTGAAAATGGATTGAAGCCCGGGCGGTGGATTCTACTCAACTTTAGCCGATGGAGAAAGCCCCGGGATCCGGGCTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACCAGGCTGTGGATAACCCGGATCCTGTAATAAAGATCAATGCGTTGGAAAGGATCACTAGCTGTGAATGATCGGTGATCGTGGCCCGTATAAGCTGGGATCAAAACGAGTACTTATACACAACTCAAAAAGTGAACAACGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTCCACCAGATTTATCCACAATGGATCGCACGATCTTTACACmioC
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif CGGGCTGTGRA

StartP-valueSite
441.81e-06GATTGAAGCCCGGGCGGTGGATTCTACTCAA
1632.62e-06AGGATCGCACCAGGCTGTGGATAACCCGGAT
194.95e-06CCTCGCATAACGCGGTGTGAAAATGGATTGA
2185.82e-06GAAAGGATCACTAGCTGTGAATGATCGGTGA
941.37e-05CCCCGGGATCCGGGCTATTAAAAAGAAGATC

Motif CBGGGATC

StartP-valueSite
869.07e-06GGAGAAAGCCCCGGGATCCGGGCTATTA
2553.92e-05CCCGTATAAGCTGGGATCAAAACGAGTA
1773.92e-05CTGTGGATAACCCGGATCCTGTAATAAA
2338.08e-05TGTGAATGATCGGTGATCGTGGCCCGTA

Motif GGATCGCAC

StartP-valueSite
3592.61e-06TATCCACAATGGATCGCACGATCTTTACA
1542.61e-06TCTCTTATTAGGATCGCACCAGGCTGTGG
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI96000399 100.0 378 0 0 1 378 1 378 0.0 699
ORI92520065 100.0 378 0 0 1 378 1 378 0.0 699
ORI92520068 99.735 378 1 0 1 378 1 378 0.0 693
ORI95030441 99.471 378 2 0 1 378 396 19 0.0 688
ORI92720083 99.471 378 2 0 1 378 1 378 0.0 688
ORI92520073 99.471 378 2 0 1 378 1 378 0.0 688
ORI92520067 99.471 378 2 0 1 378 1 378 0.0 688
ORI92520066 99.471 378 2 0 1 378 1 378 0.0 688
ORI92520064 99.471 378 2 0 1 378 1 378 0.0 688
ORI10020021 99.471 378 2 0 1 378 1 378 0.0 688
ORI95020132 99.206 378 3 0 1 378 1 378 0.0 682
ORI92520071 99.206 378 3 0 1 378 378 1 0.0 682
ORI92230183 99.206 378 3 0 1 378 1 378 0.0 682
ORI10020023 99.206 378 3 0 1 378 1 378 0.0 682
ORI10020009 99.206 378 3 0 1 378 1 378 0.0 682
ORI95030469 99.204 377 3 0 1 377 1 377 0.0 680
ORI95030444 99.204 377 3 0 1 377 1 377 0.0 680
ORI95030443 99.204 377 3 0 1 377 1 377 0.0 680
ORI95030442 99.204 377 3 0 1 377 1 377 0.0 680
ORI95020131 99.204 377 3 0 1 377 1 377 0.0 680
ORI95030436 99.204 377 3 0 1 377 1 377 0.0 680
ORI92520070 98.942 378 4 0 1 378 1 378 0.0 676
ORI95020129 98.677 378 5 0 1 378 378 1 0.0 671
ORI10020015 98.677 378 5 0 1 378 378 1 0.0 671
ORI10020010 98.677 378 5 0 1 378 378 1 0.0 671
ORI94030400 94.18 378 22 0 1 378 1 378 0.0 577
ORI92230179 92.876 379 24 3 1 378 377 1 0.0 547
ORI93030277 91.293 379 31 2 1 378 378 1 0.0 516
ORI96000401 87.903 372 45 0 1 372 1 372 0.0 438
ORI94030303 87.903 372 45 0 1 372 1 372 0.0 438
ORI92230170 87.936 373 43 2 1 372 1 372 0.0 438
ORI96000414 87.366 372 47 0 1 372 1 372 0.0 427
ORI96000411 87.366 372 47 0 1 372 1 372 0.0 427
ORI93020113 87.366 372 47 0 1 372 1 372 0.0 427
ORI94030302 87.366 372 47 0 1 372 1 372 0.0 427
ORI92720080 87.366 372 47 0 1 372 1 372 0.0 427
ORI92320059 87.366 372 47 0 1 372 1 372 0.0 427
ORI96000422 87.097 372 48 0 1 372 1 372 0.0 422
ORI96000408 87.097 372 48 0 1 372 1 372 0.0 422
ORI96000405 87.097 372 48 0 1 372 1 372 0.0 422
ORI96000400 86.772 378 50 0 1 378 378 1 0.0 422
ORI96000390 87.097 372 48 0 1 372 1 372 0.0 422
ORI93020099 87.097 372 48 0 1 372 1 372 0.0 422
ORI93020090 87.097 372 48 0 1 372 1 372 0.0 422
ORI92720076 87.097 372 48 0 1 372 1 372 0.0 422
ORI92330196 87.097 372 48 0 1 372 1 372 0.0 422
ORI92220052 87.097 372 48 0 1 372 1 372 0.0 422
ORI96000364 86.772 378 50 0 1 378 378 1 0.0 422
ORI10030070 86.772 378 50 0 1 378 378 1 0.0 422
ORI10030036 86.772 378 50 0 1 378 378 1 0.0 422
ORI10030030 87.097 372 48 0 1 372 1 372 0.0 422
ORI10020005 87.097 372 48 0 1 372 1 372 0.0 422
ORI10020004 87.097 372 48 0 1 372 1 372 0.0 422
ORI10020002 87.097 372 48 0 1 372 1 372 0.0 422
ORI10020001 86.772 378 50 0 1 378 378 1 0.0 422
ORI96000438 86.508 378 51 0 1 378 378 1 0.0 416
ORI96000437 86.508 378 51 0 1 378 378 1 0.0 416
ORI96000436 86.508 378 51 0 1 378 378 1 0.0 416
ORI96000416 86.828 372 49 0 1 372 1 372 0.0 416
ORI96000409 86.828 372 49 0 1 372 1 372 0.0 416
ORI96000368 86.828 372 49 0 1 372 1 372 0.0 416
ORI93020102 86.508 378 51 0 1 378 378 1 0.0 416
ORI96000367 86.828 372 49 0 1 372 1 372 0.0 416
ORI93020098 86.828 372 49 0 1 372 1 372 0.0 416
ORI93020096 86.508 378 51 0 1 378 378 1 0.0 416
ORI93020093 86.828 372 49 0 1 372 1 372 0.0 416
ORI94030301 86.828 372 49 0 1 372 1 372 0.0 416
ORI94030298 86.828 372 49 0 1 372 1 372 0.0 416
ORI92720079 86.828 372 49 0 1 372 1 372 0.0 416
ORI92720078 86.828 372 49 0 1 372 1 372 0.0 416
ORI92330207 86.508 378 51 0 1 378 378 1 0.0 416
ORI92320058 86.508 378 51 0 1 378 378 1 0.0 416
ORI92220053 86.828 372 49 0 1 372 1 372 0.0 416
ORI30020034 86.828 372 49 0 1 372 82 453 0.0 416
ORI10030083 86.508 378 51 0 1 378 378 1 0.0 416
ORI93020104 86.828 372 48 1 1 372 1 371 0.0 414
ORI96000417 86.559 372 50 0 1 372 1 372 0.0 411
ORI96000415 86.559 372 50 0 1 372 1 372 0.0 411
ORI96000410 86.559 372 50 0 1 372 1 372 0.0 411
ORI96000407 86.559 372 50 0 1 372 1 372 0.0 411
ORI96000406 86.559 372 50 0 1 372 1 372 0.0 411
ORI96000404 86.559 372 50 0 1 372 1 372 0.0 411
ORI96000402 86.559 372 50 0 1 372 1 372 0.0 411
ORI95030447 86.243 378 52 0 1 378 378 1 0.0 411
ORI96000365 86.559 372 50 0 1 372 1 372 0.0 411
ORI94030299 86.559 372 50 0 1 372 1 372 0.0 411
ORI50020036 86.559 372 50 0 1 372 1 372 0.0 411
ORI30020033 86.559 372 50 0 1 372 1 372 0.0 411
ORI10020028 86.559 372 50 0 1 372 1 372 0.0 411
ORI93020103 86.28 379 49 3 1 378 377 1 0.0 409
ORI96000413 86.29 372 51 0 1 372 1 372 0.0 405
ORI96000412 86.29 372 51 0 1 372 1 372 0.0 405
ORI96000403 86.29 372 51 0 1 372 1 372 0.0 405
ORI10020012 86.29 372 51 0 1 372 1 372 0.0 405
ORI94030300 86.022 372 52 0 1 372 1 372 0.0 399
ORI10030084 85.714 378 54 0 1 378 378 1 0.0 399
ORI94030323 84.881 377 49 8 7 378 377 4 0.0 374
ORI96000432 84.677 372 46 11 7 372 367 1 0.0 361
ORI96000434 83.69 374 54 6 7 377 374 5 0.0 346
ORI96000393 83.733 375 52 8 7 377 8 377 0.0 346
ORI95020130 83.69 374 54 6 7 377 8 377 0.0 346
ORI93020089 83.69 374 54 6 7 377 8 377 0.0 346
ORI92020049 83.69 374 54 6 7 377 8 377 0.0 346
ORI94030388 83.161 386 49 15 1 377 1 379 0.0 339
ORI93020111 82.94 381 57 7 1 377 381 5 0.0 337
ORI92520072 82.94 381 57 7 1 377 381 5 0.0 337
ORI93020120 83.333 372 51 8 7 372 367 1 0.0 333
ORI95020126 82.62 374 50 13 7 372 367 1 0.0 316
ORI96000429 82.258 372 55 10 7 372 367 1 0.0 311
ORI95020123 82.21 371 57 9 7 372 367 1 0.0 311
ORI96000423 83.849 291 43 4 42 330 331 43 0.0 274
ORI94030317 76.543 243 47 9 89 326 90 327 1.24e-29 124