RefSeq NC_018522.1
Accession number NC_018522.1
DoriC accession number ORI96000434
OriC length 381 nt
OriC AT content 0.577428
The location of oriC region 5351984..5352364 nt
Browse in NCBI
OriC map
OriC sequences
mioCGAATTGTAAAGATCGTCCGATCTTCTGTGGATAACCATGCTTAAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTAGTATGGTTTTTGAGCTGTGCATAACCCTTCATTCTGATCCCAGCTTATACGGACCAGGATCACCGATCATTCACAGATAGTGATCCTTCTTAAGCTTTTGATCTTACTTCGCGGATCCGACTTATCCACAAAGAGAGTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTATATAAAGATCTTCTTTTTAATACTCAGGATCCCGGAGTCTTTCTCGAAAGACGAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTATGCGAGGCAGACCACCgidA
mioCGAATTGTAAAGATCGTCCGATCTTCTGTGGATAACCATGCTTAAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTAGTATGGTTTTTGAGCTGTGCATAACCCTTCATTCTGATCCCAGCTTATACGGACCAGGATCACCGATCATTCACAGATAGTGATCCTTCTTAAGCTTTTGATCTTACTTCGCGGATCCGACTTATCCACAAAGAGAGTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTATATAAAGATCTTCTTTTTAATACTCAGGATCCCGGAGTCTTTCTCGAAAGACGAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTATGCGAGGCAGACCACCgidA
mioCGAATTGTAAAGATCGTCCGATCTTCTGTGGATAACCATGCTTAAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTAGTATGGTTTTTGAGCTGTGCATAACCCTTCATTCTGATCCCAGCTTATACGGACCAGGATCACCGATCATTCACAGATAGTGATCCTTCTTAAGCTTTTGATCTTACTTCGCGGATCCGACTTATCCACAAAGAGAGTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTATATAAAGATCTTCTTTTTAATACTCAGGATCCCGGAGTCTTTCTCGAAAGACGAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTATGCGAGGCAGACCACCgidA
mioCGAATTGTAAAGATCGTCCGATCTTCTGTGGATAACCATGCTTAAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTAGTATGGTTTTTGAGCTGTGCATAACCCTTCATTCTGATCCCAGCTTATACGGACCAGGATCACCGATCATTCACAGATAGTGATCCTTCTTAAGCTTTTGATCTTACTTCGCGGATCCGACTTATCCACAAAGAGAGTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTATATAAAGATCTTCTTTTTAATACTCAGGATCCCGGAGTCTTTCTCGAAAGACGAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTATGCGAGGCAGACCACCgidA
mioCGAATTGTAAAGATCGTCCGATCTTCTGTGGATAACCATGCTTAAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTAGTATGGTTTTTGAGCTGTGCATAACCCTTCATTCTGATCCCAGCTTATACGGACCAGGATCACCGATCATTCACAGATAGTGATCCTTCTTAAGCTTTTGATCTTACTTCGCGGATCCGACTTATCCACAAAGAGAGTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTATATAAAGATCTTCTTTTTAATACTCAGGATCCCGGAGTCTTTCTCGAAAGACGAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTATGCGAGGCAGACCACCgidA
mioCGAATTGTAAAGATCGTCCGATCTTCTGTGGATAACCATGCTTAAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTAGTATGGTTTTTGAGCTGTGCATAACCCTTCATTCTGATCCCAGCTTATACGGACCAGGATCACCGATCATTCACAGATAGTGATCCTTCTTAAGCTTTTGATCTTACTTCGCGGATCCGACTTATCCACAAAGAGAGTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTATATAAAGATCTTCTTTTTAATACTCAGGATCCCGGAGTCTTTCTCGAAAGACGAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTATGCGAGGCAGACCACCgidA
mioCGAATTGTAAAGATCGTCCGATCTTCTGTGGATAACCATGCTTAAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTAGTATGGTTTTTGAGCTGTGCATAACCCTTCATTCTGATCCCAGCTTATACGGACCAGGATCACCGATCATTCACAGATAGTGATCCTTCTTAAGCTTTTGATCTTACTTCGCGGATCCGACTTATCCACAAAGAGAGTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTATATAAAGATCTTCTTTTTAATACTCAGGATCCCGGAGTCTTTCTCGAAAGACGAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTATGCGAGGCAGACCACCgidA
miocGAATTGTAAAGATCGTCCGATCTTCTGTGGATAACCATGCTTAAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTAGTATGGTTTTTGAGCTGTGCATAACCCTTCATTCTGATCCCAGCTTATACGGACCAGGATCACCGATCATTCACAGATAGTGATCCTTCTTAAGCTTTTGATCTTACTTCGCGGATCCGACTTATCCACAAAGAGAGTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTATATAAAGATCTTCTTTTTAATACTCAGGATCCCGGAGTCTTTCTCGAAAGACGAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTATGCGAGGCAGACCACCgida
mioCGAATTGTAAAGATCGTCCGATCTTCTGTGGATAACCATGCTTAAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTAGTATGGTTTTTGAGCTGTGCATAACCCTTCATTCTGATCCCAGCTTATACGGACCAGGATCACCGATCATTCACAGATAGTGATCCTTCTTAAGCTTTTGATCTTACTTCGCGGATCCGACTTATCCACAAAGAGAGTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTATATAAAGATCTTCTTTTTAATACTCAGGATCCCGGAGTCTTTCTCGAAAGACGAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTATGCGAGGCAGACCACCgidA
mioCGAATTGTAAAGATCGTCCGATCTTCTGTGGATAACCATGCTTAAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTAGTATGGTTTTTGAGCTGTGCATAACCCTTCATTCTGATCCCAGCTTATACGGACCAGGATCACCGATCATTCACAGATAGTGATCCTTCTTAAGCTTTTGATCTTACTTCGCGGATCCGACTTATCCACAAAGAGAGTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTATATAAAGATCTTCTTTTTAATACTCAGGATCCCGGAGTCTTTCTCGAAAGACGAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTATGCGAGGCAGACCACCgidA
mioCGAATTGTAAAGATCGTCCGATCTTCTGTGGATAACCATGCTTAAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTAGTATGGTTTTTGAGCTGTGCATAACCCTTCATTCTGATCCCAGCTTATACGGACCAGGATCACCGATCATTCACAGATAGTGATCCTTCTTAAGCTTTTGATCTTACTTCGCGGATCCGACTTATCCACAAAGAGAGTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTATATAAAGATCTTCTTTTTAATACTCAGGATCCCGGAGTCTTTCTCGAAAGACGAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTATGCGAGGCAGACCACCgidA
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif GGATCMMCGRBYMKTBMTHSAAAG

StartP-valueSite
2862.99e-12TTAATACTCAGGATCCCGGAGTCTTTCTCGAAAGACGAAAGTTG
511.65e-11TTAAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTA
1411.22e-09ATACGGACCAGGATCACCGATCATTCACAGATAGTGATCCTTCT
3242.32e-09AAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATA

Motif GATCYT

StartP-valueSite
2663.03e-04TCTATATAAAGATCTTCTTTTTAATA
1843.03e-04TTAAGCTTTTGATCTTACTTCGCGGA
193.03e-04AAGATCGTCCGATCTTCTGTGGATAA
2245.50e-04AAAGAGAGTCGATCCTAATAAGAGAT
1665.50e-04CACAGATAGTGATCCTTCTTAAGCTT

Motif CTGTGSATAACC

StartP-valueSite
255.07e-08GTCCGATCTTCTGTGGATAACCATGCTTAAAA
991.13e-07GGTTTTTGAGCTGTGCATAACCCTTCATTCTG
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI96000434 100.0 381 0 0 1 381 1 381 0.0 704
ORI95020130 100.0 381 0 0 1 381 381 1 0.0 704
ORI93020089 100.0 381 0 0 1 381 381 1 0.0 704
ORI92020049 100.0 381 0 0 1 381 381 1 0.0 704
ORI96000393 99.738 381 1 0 1 381 381 1 0.0 699
ORI92520072 96.325 381 14 0 1 381 1 381 0.0 627
ORI93020111 96.063 381 15 0 1 381 1 381 0.0 621
ORI94030388 92.368 380 27 2 4 381 380 1 0.0 540
ORI94030323 87.855 387 36 10 1 380 1 383 0.0 444
ORI93030277 87.399 373 42 4 5 374 2 372 0.0 424
ORI96000414 86.544 379 37 11 10 381 372 1 0.0 405
ORI93020113 86.544 379 37 11 10 381 372 1 0.0 405
ORI92720080 86.544 379 37 11 10 381 372 1 0.0 405
ORI96000422 86.28 379 38 11 10 381 372 1 0.0 399
ORI96000408 86.28 379 38 11 10 381 372 1 0.0 399
ORI96000405 86.28 379 38 11 10 381 372 1 0.0 399
ORI96000404 86.28 379 38 11 10 381 372 1 0.0 399
ORI96000402 86.28 379 38 11 10 381 372 1 0.0 399
ORI96000401 86.316 380 36 13 10 381 372 1 0.0 399
ORI96000400 86.126 382 39 11 7 381 4 378 0.0 399
ORI96000390 86.28 379 38 11 10 381 372 1 0.0 399
ORI93020099 86.28 379 38 11 10 381 372 1 0.0 399
ORI93020090 86.28 379 38 11 10 381 372 1 0.0 399
ORI94030303 86.316 380 36 13 10 381 372 1 0.0 399
ORI94030299 86.28 379 38 11 10 381 372 1 0.0 399
ORI92720076 86.28 379 38 11 10 381 372 1 0.0 399
ORI92330196 86.28 379 38 11 10 381 372 1 0.0 399
ORI92220052 86.28 379 38 11 10 381 372 1 0.0 399
ORI50020036 86.28 379 38 11 10 381 372 1 0.0 399
ORI10020028 86.28 379 38 11 10 381 372 1 0.0 399
ORI96000364 86.126 382 39 11 7 381 4 378 0.0 399
ORI10030083 86.126 382 39 11 7 381 4 378 0.0 399
ORI10030036 86.126 382 39 11 7 381 4 378 0.0 399
ORI10030030 86.28 379 38 11 10 381 372 1 0.0 399
ORI10020005 86.28 379 38 11 10 381 372 1 0.0 399
ORI10020004 86.28 379 38 11 10 381 372 1 0.0 399
ORI10020002 86.28 379 38 11 10 381 372 1 0.0 399
ORI10020001 86.126 382 39 11 7 381 4 378 0.0 399
ORI93020104 86.28 379 37 11 10 381 371 1 0.0 398
ORI96000438 85.864 382 40 11 7 381 4 378 0.0 394
ORI96000437 85.864 382 40 11 7 381 4 378 0.0 394
ORI96000436 85.864 382 40 11 7 381 4 378 0.0 394
ORI96000416 86.016 379 39 11 10 381 372 1 0.0 394
ORI96000411 86.016 379 39 11 10 381 372 1 0.0 394
ORI96000409 86.016 379 39 11 10 381 372 1 0.0 394
ORI96000406 86.016 379 39 11 10 381 372 1 0.0 394
ORI96000368 86.016 379 39 11 10 381 372 1 0.0 394
ORI93020102 85.864 382 40 11 7 381 4 378 0.0 394
ORI96000367 86.016 379 39 11 10 381 372 1 0.0 394
ORI93020098 86.016 379 39 11 10 381 372 1 0.0 394
ORI93020096 85.864 382 40 11 7 381 4 378 0.0 394
ORI93020093 86.016 379 39 11 10 381 372 1 0.0 394
ORI96000365 86.016 379 39 11 10 381 372 1 0.0 394
ORI94030302 86.016 379 39 11 10 381 372 1 0.0 394
ORI94030301 86.016 379 39 11 10 381 372 1 0.0 394
ORI94030298 86.016 379 39 11 10 381 372 1 0.0 394
ORI92720078 86.016 379 39 11 10 381 372 1 0.0 394
ORI92330207 85.864 382 40 11 7 381 4 378 0.0 394
ORI92320059 86.016 379 39 11 10 381 372 1 0.0 394
ORI92320058 85.864 382 40 11 7 381 4 378 0.0 394
ORI92220053 86.016 379 39 11 10 381 372 1 0.0 394
ORI30020034 86.016 379 39 12 10 381 453 82 0.0 394
ORI10030070 85.864 382 40 11 7 381 4 378 0.0 394
ORI93020103 85.864 382 39 11 7 381 4 377 0.0 392
ORI96000417 85.752 379 40 11 10 381 372 1 0.0 388
ORI96000415 85.752 379 40 11 10 381 372 1 0.0 388
ORI96000410 85.752 379 40 11 10 381 372 1 0.0 388
ORI96000407 85.752 379 40 11 10 381 372 1 0.0 388
ORI95030447 85.602 382 41 11 7 381 4 378 0.0 388
ORI94030300 85.752 379 40 11 10 381 372 1 0.0 388
ORI30020033 85.752 379 40 11 10 381 372 1 0.0 388
ORI96000413 85.488 379 41 11 10 381 372 1 0.0 383
ORI96000412 85.488 379 41 11 10 381 372 1 0.0 383
ORI96000403 85.488 379 41 11 10 381 372 1 0.0 383
ORI92720079 85.488 379 41 11 10 381 372 1 0.0 383
ORI10020012 85.488 379 41 11 10 381 372 1 0.0 383
ORI96000432 85.185 378 46 9 10 381 1 374 0.0 379
ORI10030084 85.079 382 43 11 7 381 4 378 0.0 377
ORI92230170 85.135 370 46 8 10 374 372 7 0.0 370
ORI95020129 84.085 377 47 9 5 374 2 372 0.0 351
ORI10020015 84.085 377 47 9 5 374 2 372 0.0 351
ORI10020010 84.085 377 47 9 5 374 2 372 0.0 351
ORI96000429 84.53 362 46 9 26 381 17 374 0.0 350
ORI95020123 84.53 362 46 9 26 381 17 374 0.0 350
ORI96000399 83.69 374 54 6 5 374 377 7 0.0 346
ORI94030400 83.777 376 50 10 5 374 377 7 0.0 346
ORI92520065 83.69 374 54 6 5 374 377 7 0.0 346
ORI92230179 83.69 374 53 7 5 374 2 371 0.0 346
ORI93020120 84.167 360 51 5 26 381 17 374 0.0 344
ORI95030469 83.511 376 51 7 5 374 377 7 0.0 340
ORI95030444 83.511 376 51 7 5 374 377 7 0.0 340
ORI95020132 83.511 376 51 7 5 374 377 7 0.0 340
ORI95030443 83.511 376 51 7 5 374 377 7 0.0 340
ORI95030442 83.511 376 51 7 5 374 377 7 0.0 340
ORI95020131 83.511 376 51 7 5 374 377 7 0.0 340
ORI95030436 83.511 376 51 7 5 374 377 7 0.0 340
ORI92520068 83.554 377 49 9 5 374 377 7 0.0 340
ORI92520066 83.554 377 49 9 5 374 377 7 0.0 340
ORI10020009 83.511 376 51 7 5 374 377 7 0.0 340
ORI95030441 83.113 379 53 7 2 374 17 390 0.0 335
ORI92720083 83.245 376 52 7 5 374 377 7 0.0 335
ORI92520073 83.245 376 52 7 5 374 377 7 0.0 335
ORI92520067 83.289 377 50 9 5 374 377 7 0.0 335
ORI92520064 83.245 376 52 7 5 374 377 7 0.0 335
ORI92230183 83.289 377 50 9 5 374 377 7 0.0 335
ORI10020021 83.289 377 50 9 5 374 377 7 0.0 335
ORI95020126 83.747 363 47 11 26 381 17 374 0.0 333
ORI92520071 82.979 376 53 7 5 374 2 372 0.0 329
ORI10020023 82.979 376 53 7 5 374 377 7 0.0 329
ORI92520070 82.759 377 52 9 5 374 377 7 0.0 324
ORI96000423 78.932 337 58 11 10 339 1 331 0.0 217