RefSeq NC_016818.1
Accession number NC_016818.1
DoriC accession number ORI95030439
OriC length 379 nt
OriC AT content 0.580475
The location of oriC region 4828078..4828456 nt
Browse in NCBI
OriC map
OriC sequences
mioCGTGTAAATTTCAGGCGATCAGATGTGGATAACTAGGCTTAAAAGCAGGGTAAAACCGGTAGTTATCCCTCTAACAACACCTGTACGCTTTTCATGCTGTGCATAACTCTCCATTCTGATCCCAGCTTATACTGGCCAGGATCACCGATCATTCACAGCATTCGATCCTTCTTAGCATACTGATCTTCATAAACAAAAAAGACTTATGCACAGAGGATCGCGATCCTAATAGAAGTATTAATAAGAGATCTTTAAATAAAAAAGATCTTCTTTTAATTAGTGAAGATCCCCGGGGACTTGTGGAAGCTCAAAACTTGAGTAGAATCCCTCCTCCCAACGCCATACAAAGAAAGTTCGCTTGAACGCCGAGGTGCAGTCGCgidA
mioCGTGTAAATTTCAGGCGATCAGATGTGGATAACTAGGCTTAAAAGCAGGGTAAAACCGGTAGTTATCCCTCTAACAACACCTGTACGCTTTTCATGCTGTGCATAACTCTCCATTCTGATCCCAGCTTATACTGGCCAGGATCACCGATCATTCACAGCATTCGATCCTTCTTAGCATACTGATCTTCATAAACAAAAAAGACTTATGCACAGAGGATCGCGATCCTAATAGAAGTATTAATAAGAGATCTTTAAATAAAAAAGATCTTCTTTTAATTAGTGAAGATCCCCGGGGACTTGTGGAAGCTCAAAACTTGAGTAGAATCCCTCCTCCCAACGCCATACAAAGAAAGTTCGCTTGAACGCCGAGGTGCAGTCGCgidA
mioCGTGTAAATTTCAGGCGATCAGATGTGGATAACTAGGCTTAAAAGCAGGGTAAAACCGGTAGTTATCCCTCTAACAACACCTGTACGCTTTTCATGCTGTGCATAACTCTCCATTCTGATCCCAGCTTATACTGGCCAGGATCACCGATCATTCACAGCATTCGATCCTTCTTAGCATACTGATCTTCATAAACAAAAAAGACTTATGCACAGAGGATCGCGATCCTAATAGAAGTATTAATAAGAGATCTTTAAATAAAAAAGATCTTCTTTTAATTAGTGAAGATCCCCGGGGACTTGTGGAAGCTCAAAACTTGAGTAGAATCCCTCCTCCCAACGCCATACAAAGAAAGTTCGCTTGAACGCCGAGGTGCAGTCGCgidA
mioCGTGTAAATTTCAGGCGATCAGATGTGGATAACTAGGCTTAAAAGCAGGGTAAAACCGGTAGTTATCCCTCTAACAACACCTGTACGCTTTTCATGCTGTGCATAACTCTCCATTCTGATCCCAGCTTATACTGGCCAGGATCACCGATCATTCACAGCATTCGATCCTTCTTAGCATACTGATCTTCATAAACAAAAAAGACTTATGCACAGAGGATCGCGATCCTAATAGAAGTATTAATAAGAGATCTTTAAATAAAAAAGATCTTCTTTTAATTAGTGAAGATCCCCGGGGACTTGTGGAAGCTCAAAACTTGAGTAGAATCCCTCCTCCCAACGCCATACAAAGAAAGTTCGCTTGAACGCCGAGGTGCAGTCGCgidA
mioCGTGTAAATTTCAGGCGATCAGATGTGGATAACTAGGCTTAAAAGCAGGGTAAAACCGGTAGTTATCCCTCTAACAACACCTGTACGCTTTTCATGCTGTGCATAACTCTCCATTCTGATCCCAGCTTATACTGGCCAGGATCACCGATCATTCACAGCATTCGATCCTTCTTAGCATACTGATCTTCATAAACAAAAAAGACTTATGCACAGAGGATCGCGATCCTAATAGAAGTATTAATAAGAGATCTTTAAATAAAAAAGATCTTCTTTTAATTAGTGAAGATCCCCGGGGACTTGTGGAAGCTCAAAACTTGAGTAGAATCCCTCCTCCCAACGCCATACAAAGAAAGTTCGCTTGAACGCCGAGGTGCAGTCGCgidA
mioCGTGTAAATTTCAGGCGATCAGATGTGGATAACTAGGCTTAAAAGCAGGGTAAAACCGGTAGTTATCCCTCTAACAACACCTGTACGCTTTTCATGCTGTGCATAACTCTCCATTCTGATCCCAGCTTATACTGGCCAGGATCACCGATCATTCACAGCATTCGATCCTTCTTAGCATACTGATCTTCATAAACAAAAAAGACTTATGCACAGAGGATCGCGATCCTAATAGAAGTATTAATAAGAGATCTTTAAATAAAAAAGATCTTCTTTTAATTAGTGAAGATCCCCGGGGACTTGTGGAAGCTCAAAACTTGAGTAGAATCCCTCCTCCCAACGCCATACAAAGAAAGTTCGCTTGAACGCCGAGGTGCAGTCGCgidA
mioCGTGTAAATTTCAGGCGATCAGATGTGGATAACTAGGCTTAAAAGCAGGGTAAAACCGGTAGTTATCCCTCTAACAACACCTGTACGCTTTTCATGCTGTGCATAACTCTCCATTCTGATCCCAGCTTATACTGGCCAGGATCACCGATCATTCACAGCATTCGATCCTTCTTAGCATACTGATCTTCATAAACAAAAAAGACTTATGCACAGAGGATCGCGATCCTAATAGAAGTATTAATAAGAGATCTTTAAATAAAAAAGATCTTCTTTTAATTAGTGAAGATCCCCGGGGACTTGTGGAAGCTCAAAACTTGAGTAGAATCCCTCCTCCCAACGCCATACAAAGAAAGTTCGCTTGAACGCCGAGGTGCAGTCGCgidA
miocGTGTAAATTTCAGGCGATCAGATGTGGATAACTAGGCTTAAAAGCAGGGTAAAACCGGTAGTTATCCCTCTAACAACACCTGTACGCTTTTCATGCTGTGCATAACTCTCCATTCTGATCCCAGCTTATACTGGCCAGGATCACCGATCATTCACAGCATTCGATCCTTCTTAGCATACTGATCTTCATAAACAAAAAAGACTTATGCACAGAGGATCGCGATCCTAATAGAAGTATTAATAAGAGATCTTTAAATAAAAAAGATCTTCTTTTAATTAGTGAAGATCCCCGGGGACTTGTGGAAGCTCAAAACTTGAGTAGAATCCCTCCTCCCAACGCCATACAAAGAAAGTTCGCTTGAACGCCGAGGTGCAGTCGCgida
mioCGTGTAAATTTCAGGCGATCAGATGTGGATAACTAGGCTTAAAAGCAGGGTAAAACCGGTAGTTATCCCTCTAACAACACCTGTACGCTTTTCATGCTGTGCATAACTCTCCATTCTGATCCCAGCTTATACTGGCCAGGATCACCGATCATTCACAGCATTCGATCCTTCTTAGCATACTGATCTTCATAAACAAAAAAGACTTATGCACAGAGGATCGCGATCCTAATAGAAGTATTAATAAGAGATCTTTAAATAAAAAAGATCTTCTTTTAATTAGTGAAGATCCCCGGGGACTTGTGGAAGCTCAAAACTTGAGTAGAATCCCTCCTCCCAACGCCATACAAAGAAAGTTCGCTTGAACGCCGAGGTGCAGTCGCgidA
mioCGTGTAAATTTCAGGCGATCAGATGTGGATAACTAGGCTTAAAAGCAGGGTAAAACCGGTAGTTATCCCTCTAACAACACCTGTACGCTTTTCATGCTGTGCATAACTCTCCATTCTGATCCCAGCTTATACTGGCCAGGATCACCGATCATTCACAGCATTCGATCCTTCTTAGCATACTGATCTTCATAAACAAAAAAGACTTATGCACAGAGGATCGCGATCCTAATAGAAGTATTAATAAGAGATCTTTAAATAAAAAAGATCTTCTTTTAATTAGTGAAGATCCCCGGGGACTTGTGGAAGCTCAAAACTTGAGTAGAATCCCTCCTCCCAACGCCATACAAAGAAAGTTCGCTTGAACGCCGAGGTGCAGTCGCgidA
mioCGTGTAAATTTCAGGCGATCAGATGTGGATAACTAGGCTTAAAAGCAGGGTAAAACCGGTAGTTATCCCTCTAACAACACCTGTACGCTTTTCATGCTGTGCATAACTCTCCATTCTGATCCCAGCTTATACTGGCCAGGATCACCGATCATTCACAGCATTCGATCCTTCTTAGCATACTGATCTTCATAAACAAAAAAGACTTATGCACAGAGGATCGCGATCCTAATAGAAGTATTAATAAGAGATCTTTAAATAAAAAAGATCTTCTTTTAATTAGTGAAGATCCCCGGGGACTTGTGGAAGCTCAAAACTTGAGTAGAATCCCTCCTCCCAACGCCATACAAAGAAAGTTCGCTTGAACGCCGAGGTGCAGTCGCgidA
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif CTYWBCATDCTGWKC

StartP-valueSite
1062.35e-08CTGTGCATAACTCTCCATTCTGATCCCAGCTTATA
873.92e-08CACCTGTACGCTTTTCATGCTGTGCATAACTCTCC
1705.14e-08TTCGATCCTTCTTAGCATACTGATCTTCATAAACA

Motif SSCGRKSWSHWGTSG

StartP-valueSite
2883.26e-08AGTGAAGATCCCCGGGGACTTGTGGAAGCTCAAAA
3644.39e-08TCGCTTGAACGCCGAGGTGCAGTCGC
137.99e-08GTAAATTTCAGGCGATCAGATGTGGATAACTAGGC

Motif GATCHT

StartP-valueSite
2212.23e-04AGAGGATCGCGATCCTAATAGAAGTA
1632.23e-04CACAGCATTCGATCCTTCTTAGCATA
2634.78e-04AAATAAAAAAGATCTTCTTTTAATTA
2464.78e-04ATTAATAAGAGATCTTTAAATAAAAA
1467.84e-04CAGGATCACCGATCATTCACAGCATT
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI95030439 100.0 379 0 0 1 379 1 379 0.0 701
ORI96000370 98.417 379 6 0 1 379 1 379 0.0 667
ORI94030349 98.417 379 6 0 1 379 1 379 0.0 667
ORI92220054 79.063 363 57 18 23 376 26 378 0.0 231
ORI95020126 76.573 286 50 17 14 289 8 286 1.23e-34 141
ORI10020016 78.919 185 34 5 97 278 281 99 1.6e-28 121
ORI96000423 74.818 274 55 14 23 288 17 284 9.66e-26 111