RefSeq NC_015663.1
Accession number NC_015663.1
DoriC accession number ORI94030388
OriC length 383 nt
OriC AT content 0.563969
The location of oriC region 1496150..1496532 nt
Browse in NCBI
OriC map
OriC sequences
gidAGGTGATCTGCCTCGCATAACGCGGTTTGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGCTCTTTCGAGAAAGGGGCCGGGATCCTGAGTATTAAAAAGAAGATCTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGACTCTCTTTGTGGATAAGTCGGATCCACTGTTTAAGATCAAACGCTTAAGAAGGATCGCAATCTGTGAATGATCGGTGATCCTGTTCCGTATAAGCTGGGATCAGAATGAAGGGTTATGCACAGCTCAAAAAGCGTACTCCGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTTGAGCAGGGTTATCCACAGAAGAAGCTGCGGATCTTTACAAAACmioC
gidAGGTGATCTGCCTCGCATAACGCGGTTTGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGCTCTTTCGAGAAAGGGGCCGGGATCCTGAGTATTAAAAAGAAGATCTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGACTCTCTTTGTGGATAAGTCGGATCCACTGTTTAAGATCAAACGCTTAAGAAGGATCGCAATCTGTGAATGATCGGTGATCCTGTTCCGTATAAGCTGGGATCAGAATGAAGGGTTATGCACAGCTCAAAAAGCGTACTCCGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTTGAGCAGGGTTATCCACAGAAGAAGCTGCGGATCTTTACAAAACmioC
gidAGGTGATCTGCCTCGCATAACGCGGTTTGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGCTCTTTCGAGAAAGGGGCCGGGATCCTGAGTATTAAAAAGAAGATCTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGACTCTCTTTGTGGATAAGTCGGATCCACTGTTTAAGATCAAACGCTTAAGAAGGATCGCAATCTGTGAATGATCGGTGATCCTGTTCCGTATAAGCTGGGATCAGAATGAAGGGTTATGCACAGCTCAAAAAGCGTACTCCGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTTGAGCAGGGTTATCCACAGAAGAAGCTGCGGATCTTTACAAAACmioC
gidAGGTGATCTGCCTCGCATAACGCGGTTTGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGCTCTTTCGAGAAAGGGGCCGGGATCCTGAGTATTAAAAAGAAGATCTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGACTCTCTTTGTGGATAAGTCGGATCCACTGTTTAAGATCAAACGCTTAAGAAGGATCGCAATCTGTGAATGATCGGTGATCCTGTTCCGTATAAGCTGGGATCAGAATGAAGGGTTATGCACAGCTCAAAAAGCGTACTCCGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTTGAGCAGGGTTATCCACAGAAGAAGCTGCGGATCTTTACAAAACmioC
gidAGGTGATCTGCCTCGCATAACGCGGTTTGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGCTCTTTCGAGAAAGGGGCCGGGATCCTGAGTATTAAAAAGAAGATCTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGACTCTCTTTGTGGATAAGTCGGATCCACTGTTTAAGATCAAACGCTTAAGAAGGATCGCAATCTGTGAATGATCGGTGATCCTGTTCCGTATAAGCTGGGATCAGAATGAAGGGTTATGCACAGCTCAAAAAGCGTACTCCGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTTGAGCAGGGTTATCCACAGAAGAAGCTGCGGATCTTTACAAAACmioC
gidAGGTGATCTGCCTCGCATAACGCGGTTTGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGCTCTTTCGAGAAAGGGGCCGGGATCCTGAGTATTAAAAAGAAGATCTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGACTCTCTTTGTGGATAAGTCGGATCCACTGTTTAAGATCAAACGCTTAAGAAGGATCGCAATCTGTGAATGATCGGTGATCCTGTTCCGTATAAGCTGGGATCAGAATGAAGGGTTATGCACAGCTCAAAAAGCGTACTCCGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTTGAGCAGGGTTATCCACAGAAGAAGCTGCGGATCTTTACAAAACmioC
gidAGGTGATCTGCCTCGCATAACGCGGTTTGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGCTCTTTCGAGAAAGGGGCCGGGATCCTGAGTATTAAAAAGAAGATCTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGACTCTCTTTGTGGATAAGTCGGATCCACTGTTTAAGATCAAACGCTTAAGAAGGATCGCAATCTGTGAATGATCGGTGATCCTGTTCCGTATAAGCTGGGATCAGAATGAAGGGTTATGCACAGCTCAAAAAGCGTACTCCGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTTGAGCAGGGTTATCCACAGAAGAAGCTGCGGATCTTTACAAAACmioC
gidaGGTGATCTGCCTCGCATAACGCGGTTTGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGCTCTTTCGAGAAAGGGGCCGGGATCCTGAGTATTAAAAAGAAGATCTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGACTCTCTTTGTGGATAAGTCGGATCCACTGTTTAAGATCAAACGCTTAAGAAGGATCGCAATCTGTGAATGATCGGTGATCCTGTTCCGTATAAGCTGGGATCAGAATGAAGGGTTATGCACAGCTCAAAAAGCGTACTCCGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTTGAGCAGGGTTATCCACAGAAGAAGCTGCGGATCTTTACAAAACmioc
gidAGGTGATCTGCCTCGCATAACGCGGTTTGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGCTCTTTCGAGAAAGGGGCCGGGATCCTGAGTATTAAAAAGAAGATCTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGACTCTCTTTGTGGATAAGTCGGATCCACTGTTTAAGATCAAACGCTTAAGAAGGATCGCAATCTGTGAATGATCGGTGATCCTGTTCCGTATAAGCTGGGATCAGAATGAAGGGTTATGCACAGCTCAAAAAGCGTACTCCGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTTGAGCAGGGTTATCCACAGAAGAAGCTGCGGATCTTTACAAAACmioC
gidAGGTGATCTGCCTCGCATAACGCGGTTTGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGCTCTTTCGAGAAAGGGGCCGGGATCCTGAGTATTAAAAAGAAGATCTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGACTCTCTTTGTGGATAAGTCGGATCCACTGTTTAAGATCAAACGCTTAAGAAGGATCGCAATCTGTGAATGATCGGTGATCCTGTTCCGTATAAGCTGGGATCAGAATGAAGGGTTATGCACAGCTCAAAAAGCGTACTCCGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTTGAGCAGGGTTATCCACAGAAGAAGCTGCGGATCTTTACAAAACmioC
gidAGGTGATCTGCCTCGCATAACGCGGTTTGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGCTCTTTCGAGAAAGGGGCCGGGATCCTGAGTATTAAAAAGAAGATCTTTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGACTCTCTTTGTGGATAAGTCGGATCCACTGTTTAAGATCAAACGCTTAAGAAGGATCGCAATCTGTGAATGATCGGTGATCCTGTTCCGTATAAGCTGGGATCAGAATGAAGGGTTATGCACAGCTCAAAAAGCGTACTCCGGTTATTCTTTGGATAACTACCGGTTGATCCAAGCTTTTGAGCAGGGTTATCCACAGAAGAAGCTGCGGATCTTTACAAAACmioC
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif GGTKATCCDCHKCNSAADAHGCGG

StartP-valueSite
2732.88e-11CAGAATGAAGGGTTATGCACAGCTCAAAAAGCGTACTCCGGTTA
3471.02e-10TTTTGAGCAGGGTTATCCACAGAAGAAGCTGCGGATCTTTACAA
11.26e-10.GGTGATCTGCCTCGCATAACGCGGTTTGAAAATG
2351.01e-09GTGAATGATCGGTGATCCTGTTCCGTATAAGCTGGGATCAGAAT

Motif GGATCV

StartP-valueSite
1811.74e-04TGGATAAGTCGGATCCACTGTTTAAG
911.74e-04AAAGGGGCCGGGATCCTGAGTATTAA
2133.97e-04CGCTTAAGAAGGATCGCAATCTGTGA
1553.97e-04TCTCTTATTAGGATCGACTCTCTTTG
2596.41e-04GTATAAGCTGGGATCAGAATGAAGGG

Motif GGGCCG

StartP-valueSite
851.31e-04TTCGAGAAAGGGGCCGGGATCCTGAG
461.31e-04ATTGAAGCCCGGGCCGTGGATTCTAC
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI94030388 100.0 383 0 0 1 383 1 383 0.0 708
ORI96000434 92.368 380 27 2 1 380 381 4 0.0 540
ORI95020130 92.368 380 27 2 1 380 1 378 0.0 540
ORI93020089 92.368 380 27 2 1 380 1 378 0.0 540
ORI92020049 92.368 380 27 2 1 380 1 378 0.0 540
ORI96000393 92.105 380 28 2 1 380 1 378 0.0 534
ORI92520072 92.105 380 28 2 1 380 381 4 0.0 534
ORI93020111 91.842 380 29 2 1 380 381 4 0.0 529
ORI94030323 87.912 364 32 9 2 358 383 25 0.0 418
ORI96000401 86.813 364 35 13 1 358 1 357 0.0 394
ORI94030303 86.813 364 35 13 1 358 1 357 0.0 394
ORI96000414 86.413 368 37 13 1 362 1 361 0.0 390
ORI93020113 86.413 368 37 13 1 362 1 361 0.0 390
ORI92720080 86.413 368 37 13 1 362 1 361 0.0 390
ORI10030083 86.413 368 37 13 1 362 378 18 0.0 390
ORI30020034 86.141 368 40 11 1 363 82 443 0.0 387
ORI96000422 86.141 368 38 13 1 362 1 361 0.0 385
ORI96000408 86.141 368 38 13 1 362 1 361 0.0 385
ORI96000405 86.141 368 38 13 1 362 1 361 0.0 385
ORI96000400 86.141 368 38 13 1 362 378 18 0.0 385
ORI96000390 86.104 367 40 11 1 362 1 361 0.0 385
ORI93020104 86.141 368 37 13 1 362 1 360 0.0 385
ORI93020099 86.141 368 38 13 1 362 1 361 0.0 385
ORI93020090 86.141 368 38 13 1 362 1 361 0.0 385
ORI92720076 86.141 368 38 13 1 362 1 361 0.0 385
ORI92330196 86.141 368 38 13 1 362 1 361 0.0 385
ORI92220052 86.141 368 38 13 1 362 1 361 0.0 385
ORI96000364 86.141 368 38 13 1 362 378 18 0.0 385
ORI10030036 86.104 367 40 11 1 362 378 18 0.0 385
ORI10030030 86.104 367 40 11 1 362 1 361 0.0 385
ORI10020005 86.141 368 38 13 1 362 1 361 0.0 385
ORI10020004 86.141 368 38 13 1 362 1 361 0.0 385
ORI10020002 86.141 368 38 13 1 362 1 361 0.0 385
ORI10020001 86.141 368 38 13 1 362 378 18 0.0 385
ORI96000411 86.264 364 37 13 1 358 1 357 0.0 383
ORI94030302 86.264 364 37 13 1 358 1 357 0.0 383
ORI92320059 86.264 364 37 13 1 358 1 357 0.0 383
ORI93030277 86.111 360 43 7 1 357 378 23 0.0 381
ORI96000438 85.87 368 39 13 1 362 378 18 0.0 379
ORI96000437 85.87 368 39 13 1 362 378 18 0.0 379
ORI96000436 85.87 368 39 13 1 362 378 18 0.0 379
ORI96000416 85.87 368 39 13 1 362 1 361 0.0 379
ORI96000409 85.87 368 39 13 1 362 1 361 0.0 379
ORI96000406 85.87 368 39 13 1 362 1 361 0.0 379
ORI96000368 85.87 368 39 13 1 362 1 361 0.0 379
ORI93020103 85.87 368 38 13 1 362 377 18 0.0 379
ORI93020102 85.87 368 39 13 1 362 378 18 0.0 379
ORI96000367 85.87 368 39 13 1 362 1 361 0.0 379
ORI93020098 85.87 368 39 13 1 362 1 361 0.0 379
ORI93020096 85.87 368 39 13 1 362 378 18 0.0 379
ORI93020093 85.87 368 39 13 1 362 1 361 0.0 379
ORI96000365 85.87 368 39 13 1 362 1 361 0.0 379
ORI94030301 85.87 368 39 13 1 362 1 361 0.0 379
ORI94030298 85.87 368 39 13 1 362 1 361 0.0 379
ORI92720078 85.87 368 39 13 1 362 1 361 0.0 379
ORI92330207 85.87 368 39 13 1 362 378 18 0.0 379
ORI92320058 85.87 368 39 13 1 362 378 18 0.0 379
ORI92220053 85.87 368 39 13 1 362 1 361 0.0 379
ORI10030070 85.87 368 39 13 1 362 378 18 0.0 379
ORI96000417 85.598 368 40 13 1 362 1 361 0.0 374
ORI96000415 85.598 368 40 13 1 362 1 361 0.0 374
ORI96000410 85.598 368 40 13 1 362 1 361 0.0 374
ORI96000407 85.598 368 40 13 1 362 1 361 0.0 374
ORI96000404 85.598 368 40 13 1 362 1 361 0.0 374
ORI96000402 85.598 368 40 13 1 362 1 361 0.0 374
ORI95030447 85.598 368 40 13 1 362 378 18 0.0 374
ORI94030299 85.598 368 40 13 1 362 1 361 0.0 374
ORI50020036 85.598 368 40 13 1 362 1 361 0.0 374
ORI30020033 85.598 368 40 13 1 362 1 361 0.0 374
ORI10020028 85.598 368 40 13 1 362 1 361 0.0 374
ORI92720079 85.714 364 39 13 1 358 1 357 0.0 372
ORI10030084 85.366 369 41 13 1 363 378 17 0.0 370
ORI96000413 85.326 368 41 13 1 362 1 361 0.0 368
ORI96000412 85.326 368 41 13 1 362 1 361 0.0 368
ORI96000403 85.326 368 41 13 1 362 1 361 0.0 368
ORI10020012 85.326 368 41 13 1 362 1 361 0.0 368
ORI94030300 85.054 368 42 13 1 362 1 361 0.0 363
ORI92230170 84.765 361 46 9 1 357 1 356 0.0 353
ORI94030400 83.636 385 49 14 1 379 1 377 0.0 350
ORI96000399 83.161 386 49 15 1 379 1 377 0.0 339
ORI92520066 83.29 389 43 18 1 379 1 377 0.0 339
ORI92520065 83.161 386 49 15 1 379 1 377 0.0 339
ORI95030469 83.033 389 44 18 1 379 1 377 0.0 333
ORI95030444 83.033 389 44 18 1 379 1 377 0.0 333
ORI95020132 83.033 389 44 18 1 379 1 377 0.0 333
ORI95030443 83.033 389 44 18 1 379 1 377 0.0 333
ORI95030442 83.033 389 44 18 1 379 1 377 0.0 333
ORI95020131 83.033 389 44 18 1 379 1 377 0.0 333
ORI95030436 83.033 389 44 18 1 379 1 377 0.0 333
ORI92520068 83.033 389 44 18 1 379 1 377 0.0 333
ORI92520067 83.033 389 44 18 1 379 1 377 0.0 333
ORI10020021 83.033 389 44 18 1 379 1 377 0.0 333
ORI10020009 83.033 389 44 18 1 379 1 377 0.0 333
ORI96000432 83.425 362 51 9 1 357 374 17 0.0 327
ORI95020129 82.776 389 45 18 1 379 378 2 0.0 327
ORI95030441 82.776 389 45 18 1 379 396 20 0.0 327
ORI92720083 82.776 389 45 18 1 379 1 377 0.0 327
ORI92520073 82.776 389 45 18 1 379 1 377 0.0 327
ORI92520064 82.776 389 45 18 1 379 1 377 0.0 327
ORI92230183 82.776 389 45 18 1 379 1 377 0.0 327
ORI10020015 82.776 389 45 18 1 379 378 2 0.0 327
ORI10020010 82.776 389 45 18 1 379 378 2 0.0 327
ORI96000429 83.196 363 50 10 1 357 374 17 0.0 322
ORI92520071 82.519 389 46 18 1 379 378 2 0.0 322
ORI92230179 83.149 362 51 10 1 358 377 22 0.0 322
ORI10020023 82.519 389 46 18 1 379 1 377 0.0 322
ORI95020126 82.92 363 51 9 1 357 374 17 0.0 316
ORI95020123 82.778 360 57 5 1 357 374 17 0.0 316
ORI93020120 82.873 362 53 9 1 357 374 17 0.0 316
ORI92520070 82.262 389 47 18 1 379 1 377 0.0 316
ORI96000423 78.593 327 60 9 43 364 331 10 0.0 207