RefSeq NC_011601.1
Accession number NC_011601.1
DoriC accession number ORI92720079
OriC length 378 nt
OriC AT content 0.560847
The location of oriC region 4222253..4222630 nt
Browse in NCBI
OriC map
OriC sequences
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACAGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTACCCACAGTGGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACAGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTACCCACAGTGGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACAGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTACCCACAGTGGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACAGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTACCCACAGTGGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACAGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTACCCACAGTGGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACAGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTACCCACAGTGGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACAGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTACCCACAGTGGATCGCACGATCTGTATACmioC
gidaGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACAGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTACCCACAGTGGATCGCACGATCTGTATACmioc
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACAGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTACCCACAGTGGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACAGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTACCCACAGTGGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACAGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACCGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTACCCACAGTGGATCGCACGATCTGTATACmioC
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif GAAHRABCKGKGWTC

StartP-valueSite
2262.40e-08CATTAACTGTGAATGATCGGTGATCCTGGACAGTA
795.49e-08GTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTA
2944.73e-07CTCAAAAACTGAACAACCGTTGTTCTTTGGATAAC
2486.48e-07ATCCTGGACAGTATAAGCTGGGATCAGAATGAGGG
3641.79e-06ACAGTGGATCGCACGATCTGTATAC

Motif CNGTGGAT

StartP-valueSite
481.19e-05GAAGCCCGGGCCGTGGATTCTACTCAAC
1674.29e-05TCGCACTGCCCTGTGGATAACAAGGATC
3556.00e-05GAGTTACCCACAGTGGATCGCACGATCT
3229.02e-05GGATAACTACCGGTTGATCCAAGCTTCC

Motif ARGATC

StartP-valueSite
2112.58e-04CAACCTGGAAAGGATCATTAACTGTG
1792.58e-04GTGGATAACAAGGATCCGGCTTTTAA
1532.58e-04ATCTCTTATTAGGATCGCACTGCCCT
1935.63e-04TCCGGCTTTTAAGATCAACAACCTGG
1095.63e-04TATTAAAAAGAAGATCTATTTATTTA
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI92720079 100.0 378 0 0 1 378 1 378 0.0 699
ORI96000411 99.471 378 2 0 1 378 1 378 0.0 688
ORI94030302 99.471 378 2 0 1 378 1 378 0.0 688
ORI92320059 99.471 378 2 0 1 378 1 378 0.0 688
ORI96000438 98.942 378 4 0 1 378 378 1 0.0 676
ORI96000437 98.942 378 4 0 1 378 378 1 0.0 676
ORI96000436 98.942 378 4 0 1 378 378 1 0.0 676
ORI96000416 98.942 378 4 0 1 378 1 378 0.0 676
ORI96000414 98.942 378 4 0 1 378 1 378 0.0 676
ORI96000409 98.942 378 4 0 1 378 1 378 0.0 676
ORI96000408 98.942 378 4 0 1 378 1 378 0.0 676
ORI96000405 98.942 378 4 0 1 378 1 378 0.0 676
ORI96000400 98.942 378 4 0 1 378 378 1 0.0 676
ORI93020113 98.942 378 4 0 1 378 1 378 0.0 676
ORI93020102 98.942 378 4 0 1 378 378 1 0.0 676
ORI96000367 98.942 378 4 0 1 378 1 378 0.0 676
ORI93020098 98.942 378 4 0 1 378 1 378 0.0 676
ORI93020096 98.942 378 4 0 1 378 378 1 0.0 676
ORI93020093 98.942 378 4 0 1 378 1 378 0.0 676
ORI93020090 98.942 378 4 0 1 378 1 378 0.0 676
ORI94030301 98.942 378 4 0 1 378 1 378 0.0 676
ORI94030298 98.942 378 4 0 1 378 1 378 0.0 676
ORI92720080 98.942 378 4 0 1 378 1 378 0.0 676
ORI92720078 98.942 378 4 0 1 378 1 378 0.0 676
ORI92330207 98.942 378 4 0 1 378 378 1 0.0 676
ORI92330196 98.942 378 4 0 1 378 1 378 0.0 676
ORI92320058 98.942 378 4 0 1 378 378 1 0.0 676
ORI92220053 98.942 378 4 0 1 378 1 378 0.0 676
ORI96000364 98.942 378 4 0 1 378 378 1 0.0 676
ORI10020002 98.942 378 4 0 1 378 1 378 0.0 676
ORI10020001 98.942 378 4 0 1 378 378 1 0.0 676
ORI96000422 98.677 378 5 0 1 378 1 378 0.0 671
ORI96000417 98.677 378 5 0 1 378 1 378 0.0 671
ORI96000415 98.677 378 5 0 1 378 1 378 0.0 671
ORI96000410 98.677 378 5 0 1 378 1 378 0.0 671
ORI96000407 98.677 378 5 0 1 378 1 378 0.0 671
ORI96000406 98.677 378 5 0 1 378 1 378 0.0 671
ORI96000401 98.677 378 5 0 1 378 1 378 0.0 671
ORI95030447 98.677 378 5 0 1 378 378 1 0.0 671
ORI96000368 98.677 378 5 0 1 378 1 378 0.0 671
ORI93020099 98.677 378 5 0 1 378 1 378 0.0 671
ORI96000365 98.677 378 5 0 1 378 1 378 0.0 671
ORI94030303 98.677 378 5 0 1 378 1 378 0.0 671
ORI92720076 98.677 378 5 0 1 378 1 378 0.0 671
ORI92220052 98.677 378 5 0 1 378 1 378 0.0 671
ORI30020033 98.677 378 5 0 1 378 1 378 0.0 671
ORI10030083 98.677 378 5 0 1 378 378 1 0.0 671
ORI10030070 98.677 378 5 0 1 378 378 1 0.0 671
ORI10020005 98.677 378 5 0 1 378 1 378 0.0 671
ORI10020004 98.677 378 5 0 1 378 1 378 0.0 671
ORI93020104 98.677 378 4 1 1 378 1 377 0.0 669
ORI96000413 98.413 378 6 0 1 378 1 378 0.0 665
ORI96000412 98.413 378 6 0 1 378 1 378 0.0 665
ORI96000404 98.413 378 6 0 1 378 1 378 0.0 665
ORI96000403 98.413 378 6 0 1 378 1 378 0.0 665
ORI96000402 98.413 378 6 0 1 378 1 378 0.0 665
ORI94030299 98.413 378 6 0 1 378 1 378 0.0 665
ORI50020036 98.413 378 6 0 1 378 1 378 0.0 665
ORI10020028 98.413 378 6 0 1 378 1 378 0.0 665
ORI10020012 98.413 378 6 0 1 378 1 378 0.0 665
ORI93020103 98.413 378 5 1 1 378 377 1 0.0 664
ORI96000390 98.148 378 7 0 1 378 1 378 0.0 660
ORI94030300 98.148 378 7 0 1 378 1 378 0.0 660
ORI10030084 98.148 378 7 0 1 378 378 1 0.0 660
ORI10030036 98.148 378 7 0 1 378 378 1 0.0 660
ORI10030030 98.148 378 7 0 1 378 1 378 0.0 660
ORI30020034 97.884 378 8 0 1 378 82 459 0.0 654
ORI93030277 89.474 380 36 4 1 378 378 1 0.0 477
ORI92230170 88.472 373 41 2 1 372 1 372 0.0 449
ORI96000399 86.828 372 49 0 1 372 1 372 0.0 416
ORI92520066 86.828 372 49 0 1 372 1 372 0.0 416
ORI92520065 86.828 372 49 0 1 372 1 372 0.0 416
ORI92520068 86.559 372 50 0 1 372 1 372 0.0 411
ORI95030469 86.29 372 51 0 1 372 1 372 0.0 405
ORI95030444 86.29 372 51 0 1 372 1 372 0.0 405
ORI95020132 86.29 372 51 0 1 372 1 372 0.0 405
ORI95030443 86.29 372 51 0 1 372 1 372 0.0 405
ORI95030442 86.29 372 51 0 1 372 1 372 0.0 405
ORI95020131 86.29 372 51 0 1 372 1 372 0.0 405
ORI95030441 85.979 378 53 0 1 378 396 19 0.0 405
ORI95030436 86.29 372 51 0 1 372 1 372 0.0 405
ORI92720083 86.29 372 51 0 1 372 1 372 0.0 405
ORI92520073 86.29 372 51 0 1 372 1 372 0.0 405
ORI92520067 86.29 372 51 0 1 372 1 372 0.0 405
ORI92520064 86.29 372 51 0 1 372 1 372 0.0 405
ORI10020021 86.29 372 51 0 1 372 1 372 0.0 405
ORI10020009 86.29 372 51 0 1 372 1 372 0.0 405
ORI94030323 86.207 377 44 8 7 378 377 4 0.0 401
ORI94030400 86.059 373 50 2 1 372 1 372 0.0 399
ORI92520071 85.714 378 54 0 1 378 378 1 0.0 399
ORI92230183 86.022 372 52 0 1 372 1 372 0.0 399
ORI10020023 86.022 372 52 0 1 372 1 372 0.0 399
ORI95020129 85.488 379 53 2 1 378 378 1 0.0 394
ORI92520070 85.753 372 53 0 1 372 1 372 0.0 394
ORI10020015 85.488 379 53 2 1 378 378 1 0.0 394
ORI10020010 85.488 379 53 2 1 378 378 1 0.0 394
ORI96000434 85.34 382 42 11 1 375 381 7 0.0 383
ORI95020130 85.488 379 41 11 1 372 1 372 0.0 383
ORI93020089 85.488 379 41 11 1 372 1 372 0.0 383
ORI92230179 85.561 374 45 8 1 370 377 9 0.0 383
ORI92020049 85.488 379 41 11 1 372 1 372 0.0 383
ORI96000393 85.224 379 42 11 1 372 1 372 0.0 377
ORI94030388 85.714 364 39 13 1 357 1 358 0.0 372
ORI92520072 84.777 381 46 11 1 375 381 7 0.0 372
ORI93020111 84.514 381 47 11 1 375 381 7 0.0 366
ORI96000432 83.641 379 50 12 1 372 374 1 0.0 346
ORI95020123 80.902 377 64 8 1 372 374 1 0.0 291
ORI93020120 80.952 378 62 9 1 372 374 1 0.0 291
ORI95020126 80.688 378 63 10 1 372 374 1 0.0 285
ORI96000429 80.423 378 64 10 1 372 374 1 0.0 279
ORI90020046 79.67 364 64 10 7 365 366 8 0.0 254
ORI96000423 81.164 292 49 5 42 330 331 43 0.0 230
ORI93020094 77.366 243 44 10 89 326 289 53 2.06e-32 134
ORI96000435 77.637 237 40 12 52 282 65 294 7.39e-32 132
ORI94030322 74.83 294 52 17 45 326 390 107 2.68e-26 113
ORI96000370 83.178 107 14 4 222 326 157 53 9.7e-21 95
ORI94030349 83.178 107 14 4 222 326 157 53 9.7e-21 95