RefSeq NC_016514.1
Accession number NC_016514.1
DoriC accession number ORI95020126
OriC length 374 nt
OriC AT content 0.561497
The location of oriC region 4705472..4705845 nt
Browse in NCBI
OriC map
OriC sequences
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCGGTAGTTATCCAAGTTATAACTCTGAGGCTGTTTTGGGCCTGTGTATAAAGTCGCGTTCTGATCCCAGCTTATACTGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACTGCATGATCTTCATCGTGAGATCGGGCTTATCCACAGAGGTACTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGTCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCGGTAGTTATCCAAGTTATAACTCTGAGGCTGTTTTGGGCCTGTGTATAAAGTCGCGTTCTGATCCCAGCTTATACTGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACTGCATGATCTTCATCGTGAGATCGGGCTTATCCACAGAGGTACTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGTCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCGGTAGTTATCCAAGTTATAACTCTGAGGCTGTTTTGGGCCTGTGTATAAAGTCGCGTTCTGATCCCAGCTTATACTGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACTGCATGATCTTCATCGTGAGATCGGGCTTATCCACAGAGGTACTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGTCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCGGTAGTTATCCAAGTTATAACTCTGAGGCTGTTTTGGGCCTGTGTATAAAGTCGCGTTCTGATCCCAGCTTATACTGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACTGCATGATCTTCATCGTGAGATCGGGCTTATCCACAGAGGTACTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGTCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCGGTAGTTATCCAAGTTATAACTCTGAGGCTGTTTTGGGCCTGTGTATAAAGTCGCGTTCTGATCCCAGCTTATACTGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACTGCATGATCTTCATCGTGAGATCGGGCTTATCCACAGAGGTACTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGTCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCGGTAGTTATCCAAGTTATAACTCTGAGGCTGTTTTGGGCCTGTGTATAAAGTCGCGTTCTGATCCCAGCTTATACTGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACTGCATGATCTTCATCGTGAGATCGGGCTTATCCACAGAGGTACTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGTCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCGGTAGTTATCCAAGTTATAACTCTGAGGCTGTTTTGGGCCTGTGTATAAAGTCGCGTTCTGATCCCAGCTTATACTGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACTGCATGATCTTCATCGTGAGATCGGGCTTATCCACAGAGGTACTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGTCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
miocAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCGGTAGTTATCCAAGTTATAACTCTGAGGCTGTTTTGGGCCTGTGTATAAAGTCGCGTTCTGATCCCAGCTTATACTGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACTGCATGATCTTCATCGTGAGATCGGGCTTATCCACAGAGGTACTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGTCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgida
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCGGTAGTTATCCAAGTTATAACTCTGAGGCTGTTTTGGGCCTGTGTATAAAGTCGCGTTCTGATCCCAGCTTATACTGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACTGCATGATCTTCATCGTGAGATCGGGCTTATCCACAGAGGTACTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGTCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCGGTAGTTATCCAAGTTATAACTCTGAGGCTGTTTTGGGCCTGTGTATAAAGTCGCGTTCTGATCCCAGCTTATACTGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACTGCATGATCTTCATCGTGAGATCGGGCTTATCCACAGAGGTACTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGTCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGAACAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAAGCGGTAGTTATCCAAGTTATAACTCTGAGGCTGTTTTGGGCCTGTGTATAAAGTCGCGTTCTGATCCCAGCTTATACTGGCCAGGATCACCGATCATTCACAGCAAACGATCCTTTCTAACTGCATGATCTTCATCGTGAGATCGGGCTTATCCACAGAGGTACTCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGTCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif GGCCHGGRTHHCAADBCDTTYTC

StartP-valueSite
3257.18e-11TAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTT
2751.37e-10CTTTTTAATAGTCCAGGATCCCAATGCTTTCTCGAAAGACTAA
1279.49e-10AGCTTATACTGGCCAGGATCACCGATCATTCACAGCAAACGAT
874.80e-09GGCTGTTTTGGGCCTGTGTATAAAGTCGCGTTCTGATCCCAGC

Motif AAAAGATC

StartP-valueSite
2552.58e-05TCTCTAAATAAAAAGATCTTCTTTTTAA
2244.41e-05CGATCCTAATAAGAGATCACAATAGAAC
2396.52e-05ATCACAATAGAACAGATCTCTAAATAAA
1531.07e-04CATTCACAGCAAACGATCCTTTCTAACT
341.07e-04AACTCTGGTTAAAAGCTCGTATTAAGCG

Motif GATCGSGC

StartP-valueSite
1897.49e-06TTCATCGTGAGATCGGGCTTATCCACAG
21.61e-05AGATCGCGCGAACAGATGT
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI95020126 100.0 374 0 0 1 374 1 374 0.0 691
ORI96000429 93.85 374 23 0 1 374 1 374 0.0 564
ORI95020123 93.6 375 22 2 1 374 1 374 0.0 558
ORI93020120 93.316 374 25 0 1 374 1 374 0.0 553
ORI96000432 91.733 375 29 2 1 374 1 374 0.0 520
ORI90020046 86.721 369 42 6 3 368 3 367 0.0 403
ORI96000434 83.702 362 49 9 17 374 26 381 0.0 333
ORI95020130 83.702 362 49 9 17 374 356 1 0.0 333
ORI94030400 83.422 374 47 12 1 367 372 7 0.0 333
ORI93020089 83.702 362 49 9 17 374 356 1 0.0 333
ORI92020049 83.702 362 49 9 17 374 356 1 0.0 333
ORI96000393 83.425 362 50 9 17 374 356 1 0.0 327
ORI95020129 82.842 373 51 13 1 367 7 372 0.0 322
ORI93030277 82.749 371 55 9 1 367 7 372 0.0 322
ORI10020015 82.842 373 51 13 1 367 7 372 0.0 322
ORI10020010 82.842 373 51 13 1 367 7 372 0.0 322
ORI96000399 82.574 373 52 13 1 367 372 7 0.0 316
ORI95030441 82.527 372 54 11 1 367 25 390 0.0 316
ORI94030388 82.92 363 51 9 17 374 357 1 0.0 316
ORI92720083 82.527 372 54 11 1 367 372 7 0.0 316
ORI92520073 82.527 372 54 11 1 367 372 7 0.0 316
ORI92520068 82.574 373 52 13 1 367 372 7 0.0 316
ORI92520065 82.574 373 52 13 1 367 372 7 0.0 316
ORI92520064 82.527 372 54 11 1 367 372 7 0.0 316
ORI92520067 83.193 357 47 13 17 367 356 7 0.0 315
ORI10020021 83.193 357 47 13 17 367 356 7 0.0 315
ORI95030469 82.258 372 55 11 1 367 372 7 0.0 311
ORI95030444 82.258 372 55 11 1 367 372 7 0.0 311
ORI95020132 82.258 372 55 11 1 367 372 7 0.0 311
ORI95030443 82.258 372 55 11 1 367 372 7 0.0 311
ORI95030442 82.258 372 55 11 1 367 372 7 0.0 311
ORI95020131 82.258 372 55 11 1 367 372 7 0.0 311
ORI95030436 82.258 372 55 11 1 367 372 7 0.0 311
ORI93020111 82.645 363 51 11 17 374 26 381 0.0 311
ORI92520072 82.645 363 51 11 17 374 26 381 0.0 311
ORI92520071 82.258 372 55 11 1 367 7 372 0.0 311
ORI92520066 82.306 373 53 13 1 367 372 7 0.0 311
ORI92230183 82.258 372 55 11 1 367 372 7 0.0 311
ORI10020023 82.258 372 55 11 1 367 372 7 0.0 311
ORI10020009 82.258 372 55 11 1 367 372 7 0.0 311
ORI92520070 81.989 372 56 11 1 367 372 7 0.0 305
ORI96000401 81.266 379 59 12 1 374 372 1 0.0 296
ORI94030303 81.266 379 59 12 1 374 372 1 0.0 296
ORI92230179 81.72 372 52 14 3 367 9 371 0.0 296
ORI10030083 81.167 377 63 8 1 374 7 378 0.0 296
ORI10030070 81.217 378 61 10 1 374 7 378 0.0 296
ORI96000416 80.952 378 62 10 1 374 372 1 0.0 291
ORI96000409 80.952 378 62 10 1 374 372 1 0.0 291
ORI96000408 80.902 377 64 8 1 374 372 1 0.0 291
ORI96000405 80.902 377 64 8 1 374 372 1 0.0 291
ORI96000404 80.952 378 62 10 1 374 372 1 0.0 291
ORI96000402 80.952 378 62 10 1 374 372 1 0.0 291
ORI96000400 80.902 377 64 8 1 374 7 378 0.0 291
ORI94030323 80.902 377 65 7 1 373 10 383 0.0 291
ORI96000368 80.902 377 64 8 1 374 372 1 0.0 291
ORI93020102 80.952 378 62 10 1 374 7 378 0.0 291
ORI96000367 80.952 378 62 10 1 374 372 1 0.0 291
ORI93020098 80.952 378 62 10 1 374 372 1 0.0 291
ORI93020096 80.952 378 62 10 1 374 7 378 0.0 291
ORI93020093 80.952 378 62 10 1 374 372 1 0.0 291
ORI93020090 80.902 377 64 8 1 374 372 1 0.0 291
ORI94030299 80.952 378 62 10 1 374 372 1 0.0 291
ORI94030298 80.952 378 62 10 1 374 372 1 0.0 291
ORI92330207 80.952 378 62 10 1 374 7 378 0.0 291
ORI92330196 80.902 377 64 8 1 374 372 1 0.0 291
ORI92320058 80.952 378 62 10 1 374 7 378 0.0 291
ORI50020036 80.952 378 62 10 1 374 372 1 0.0 291
ORI10020028 80.952 378 62 10 1 374 372 1 0.0 291
ORI96000364 80.902 377 64 8 1 374 7 378 0.0 291
ORI10020002 80.902 377 64 8 1 374 372 1 0.0 291
ORI10020001 80.902 377 64 8 1 374 7 378 0.0 291
ORI93020104 80.952 378 61 11 1 374 371 1 0.0 289
ORI96000417 80.688 378 63 10 1 374 372 1 0.0 285
ORI96000415 80.688 378 63 10 1 374 372 1 0.0 285
ORI96000414 80.688 378 63 10 1 374 372 1 0.0 285
ORI96000411 80.688 378 63 10 1 374 372 1 0.0 285
ORI96000410 80.688 378 63 10 1 374 372 1 0.0 285
ORI96000407 80.688 378 63 10 1 374 372 1 0.0 285
ORI96000406 80.688 378 63 10 1 374 372 1 0.0 285
ORI95030447 80.688 378 63 10 1 374 7 378 0.0 285
ORI93020113 80.688 378 63 10 1 374 372 1 0.0 285
ORI96000365 80.688 378 63 10 1 374 372 1 0.0 285
ORI94030302 80.688 378 63 10 1 374 372 1 0.0 285
ORI92720080 80.688 378 63 10 1 374 372 1 0.0 285
ORI92720079 80.688 378 63 10 1 374 372 1 0.0 285
ORI92320059 80.688 378 63 10 1 374 372 1 0.0 285
ORI92220052 80.688 378 63 10 1 374 372 1 0.0 285
ORI30020033 80.688 378 63 10 1 374 372 1 0.0 285
ORI93020103 80.688 378 62 11 1 374 7 377 0.0 283
ORI96000438 80.423 378 64 10 1 374 7 378 0.0 279
ORI96000437 80.423 378 64 10 1 374 7 378 0.0 279
ORI96000436 80.423 378 64 10 1 374 7 378 0.0 279
ORI96000422 80.423 378 64 10 1 374 372 1 0.0 279
ORI96000413 80.423 378 64 10 1 374 372 1 0.0 279
ORI96000412 80.423 378 64 10 1 374 372 1 0.0 279
ORI96000403 80.423 378 64 10 1 374 372 1 0.0 279
ORI96000390 80.423 378 64 10 1 374 372 1 0.0 279
ORI93020099 80.423 378 64 10 1 374 372 1 0.0 279
ORI94030301 80.423 378 64 10 1 374 372 1 0.0 279
ORI94030300 80.475 379 62 12 1 374 372 1 0.0 279
ORI92720078 80.423 378 64 10 1 374 372 1 0.0 279
ORI92720076 80.423 378 64 10 1 374 372 1 0.0 279
ORI92220053 80.423 378 64 10 1 374 372 1 0.0 279
ORI10030036 80.423 378 64 10 1 374 7 378 0.0 279
ORI10020012 80.423 378 64 10 1 374 372 1 0.0 279
ORI10030030 80.423 378 64 10 1 374 372 1 0.0 279
ORI10020005 80.423 378 64 10 1 374 372 1 0.0 279
ORI10020004 80.423 378 64 10 1 374 372 1 0.0 279
ORI30020034 80.939 362 59 10 17 374 437 82 0.0 278
ORI10030084 80.939 362 59 10 17 374 23 378 0.0 278
ORI92230170 80.217 369 68 5 1 367 372 7 0.0 272
ORI96000423 80.308 325 45 18 17 332 17 331 0.0 228
ORI94030361 79.339 242 33 14 89 322 283 51 1.56e-38 154
ORI95030439 76.573 286 50 17 8 286 14 289 1.21e-34 141
ORI80020043 79.358 218 32 11 111 322 261 51 1.21e-34 141
ORI96020517 81.053 190 23 11 89 273 98 279 4.37e-34 139