RefSeq NC_018405.1
Accession number NC_018405.1
DoriC accession number ORI96000432
OriC length 374 nt
OriC AT content 0.569519
The location of oriC region 15511..15884 nt
Browse in NCBI
OriC map
OriC sequences
mioCAGATCGCGCGATCAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAACCCGTAGTTATCCAAAGAACAACTGTTGTATCGTTTTTAGCCTGTGTATAAAGTCGCGATCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGCAAACGATCCTTCCTAACTGCATGATCTTATTTGCCGGATCGGACTTATCCACACAAGTATGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGATCAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAACCCGTAGTTATCCAAAGAACAACTGTTGTATCGTTTTTAGCCTGTGTATAAAGTCGCGATCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGCAAACGATCCTTCCTAACTGCATGATCTTATTTGCCGGATCGGACTTATCCACACAAGTATGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGATCAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAACCCGTAGTTATCCAAAGAACAACTGTTGTATCGTTTTTAGCCTGTGTATAAAGTCGCGATCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGCAAACGATCCTTCCTAACTGCATGATCTTATTTGCCGGATCGGACTTATCCACACAAGTATGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGATCAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAACCCGTAGTTATCCAAAGAACAACTGTTGTATCGTTTTTAGCCTGTGTATAAAGTCGCGATCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGCAAACGATCCTTCCTAACTGCATGATCTTATTTGCCGGATCGGACTTATCCACACAAGTATGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGATCAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAACCCGTAGTTATCCAAAGAACAACTGTTGTATCGTTTTTAGCCTGTGTATAAAGTCGCGATCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGCAAACGATCCTTCCTAACTGCATGATCTTATTTGCCGGATCGGACTTATCCACACAAGTATGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGATCAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAACCCGTAGTTATCCAAAGAACAACTGTTGTATCGTTTTTAGCCTGTGTATAAAGTCGCGATCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGCAAACGATCCTTCCTAACTGCATGATCTTATTTGCCGGATCGGACTTATCCACACAAGTATGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGATCAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAACCCGTAGTTATCCAAAGAACAACTGTTGTATCGTTTTTAGCCTGTGTATAAAGTCGCGATCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGCAAACGATCCTTCCTAACTGCATGATCTTATTTGCCGGATCGGACTTATCCACACAAGTATGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
miocAGATCGCGCGATCAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAACCCGTAGTTATCCAAAGAACAACTGTTGTATCGTTTTTAGCCTGTGTATAAAGTCGCGATCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGCAAACGATCCTTCCTAACTGCATGATCTTATTTGCCGGATCGGACTTATCCACACAAGTATGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgida
mioCAGATCGCGCGATCAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAACCCGTAGTTATCCAAAGAACAACTGTTGTATCGTTTTTAGCCTGTGTATAAAGTCGCGATCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGCAAACGATCCTTCCTAACTGCATGATCTTATTTGCCGGATCGGACTTATCCACACAAGTATGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGATCAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAACCCGTAGTTATCCAAAGAACAACTGTTGTATCGTTTTTAGCCTGTGTATAAAGTCGCGATCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGCAAACGATCCTTCCTAACTGCATGATCTTATTTGCCGGATCGGACTTATCCACACAAGTATGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
mioCAGATCGCGCGATCAGATGTGGATAACTCTGGTTAAAAGCTCGTATTAACCCGTAGTTATCCAAAGAACAACTGTTGTATCGTTTTTAGCCTGTGTATAAAGTCGCGATCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGCAAACGATCCTTCCTAACTGCATGATCTTATTTGCCGGATCGGACTTATCCACACAAGTATGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCAGGATCCCAATGCTTTCTCGAAAGACTAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCTTTACGCGAGGCAGACCACCgidA
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif GCGATC

StartP-valueSite
2131.67e-04ACACAAGTATGCGATCCTAATAAGAG
1041.67e-04GTATAAAGTCGCGATCTGATCCCAGC
81.67e-04AGATCGCGCGATCAGATGTGGAT
1383.90e-04TCCAGGATCACCGATCATTCACAGCA
1556.60e-04TTCACAGCAAACGATCCTTCCTAACT

Motif AYRGYCCRGGMT

StartP-valueSite
3239.13e-08AGTAGAATCCACGGCCCGGGCTTCAATCCATT
1241.59e-07CCCAGCTTATACGGTCCAGGATCACCGATCAT
2726.10e-07CTTCTTTTTAATAGCCCAGGATCCCAATGCTT

Motif CGKWBTTAKCC

StartP-valueSite
512.42e-07CGTATTAACCCGTAGTTATCCAAAGAACAAC
1922.02e-06TTTGCCGGATCGGACTTATCCACACAAGTAT
804.67e-06ACTGTTGTATCGTTTTTAGCCTGTGTATAAA
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI96000432 100.0 374 0 0 1 374 1 374 0.0 691
ORI93020120 94.667 375 18 2 1 374 1 374 0.0 580
ORI95020123 93.883 376 19 4 1 374 1 374 0.0 564
ORI96000429 93.6 375 22 2 1 374 1 374 0.0 558
ORI95020126 91.733 375 29 2 1 374 1 374 0.0 520
ORI93030277 86.29 372 40 11 1 367 7 372 0.0 394
ORI90020046 86.179 369 44 6 3 368 3 367 0.0 392
ORI96000434 85.185 378 46 9 1 374 10 381 0.0 379
ORI95020130 85.185 378 46 9 1 374 372 1 0.0 379
ORI93020089 85.185 378 46 9 1 374 372 1 0.0 379
ORI92020049 85.185 378 46 9 1 374 372 1 0.0 379
ORI96000393 84.921 378 47 9 1 374 372 1 0.0 374
ORI96000408 84.433 379 47 12 1 374 372 1 0.0 363
ORI96000405 84.433 379 47 12 1 374 372 1 0.0 363
ORI96000400 84.433 379 47 12 1 374 7 378 0.0 363
ORI93020090 84.433 379 47 12 1 374 372 1 0.0 363
ORI92330196 84.433 379 47 12 1 374 372 1 0.0 363
ORI96000364 84.433 379 47 12 1 374 7 378 0.0 363
ORI10020002 84.433 379 47 12 1 374 372 1 0.0 363
ORI10020001 84.433 379 47 12 1 374 7 378 0.0 363
ORI96000399 84.677 372 46 11 1 367 372 7 0.0 361
ORI92520068 84.677 372 46 11 1 367 372 7 0.0 361
ORI92520065 84.677 372 46 11 1 367 372 7 0.0 361
ORI96000414 84.169 379 48 12 1 374 372 1 0.0 357
ORI96000411 84.169 379 48 12 1 374 372 1 0.0 357
ORI96000401 84.169 379 48 12 1 374 372 1 0.0 357
ORI93020113 84.169 379 48 12 1 374 372 1 0.0 357
ORI96000368 84.169 379 48 12 1 374 372 1 0.0 357
ORI94030303 84.169 379 48 12 1 374 372 1 0.0 357
ORI94030302 84.169 379 48 12 1 374 372 1 0.0 357
ORI92720080 84.169 379 48 12 1 374 372 1 0.0 357
ORI92320059 84.169 379 48 12 1 374 372 1 0.0 357
ORI10030083 84.169 379 48 12 1 374 7 378 0.0 357
ORI10030070 84.169 379 48 12 1 374 7 378 0.0 357
ORI95030469 84.409 372 47 11 1 367 372 7 0.0 355
ORI95030444 84.409 372 47 11 1 367 372 7 0.0 355
ORI95020132 84.409 372 47 11 1 367 372 7 0.0 355
ORI95030443 84.409 372 47 11 1 367 372 7 0.0 355
ORI95030442 84.409 372 47 11 1 367 372 7 0.0 355
ORI95020131 84.409 372 47 11 1 367 372 7 0.0 355
ORI95020129 84.409 372 47 11 1 367 7 372 0.0 355
ORI95030441 84.409 372 47 11 1 367 25 390 0.0 355
ORI95030436 84.409 372 47 11 1 367 372 7 0.0 355
ORI92720083 84.409 372 47 11 1 367 372 7 0.0 355
ORI92520073 84.409 372 47 11 1 367 372 7 0.0 355
ORI92520067 84.409 372 47 11 1 367 372 7 0.0 355
ORI92520066 84.409 372 47 11 1 367 372 7 0.0 355
ORI92520064 84.409 372 47 11 1 367 372 7 0.0 355
ORI10020021 84.409 372 47 11 1 367 372 7 0.0 355
ORI10020015 84.409 372 47 11 1 367 7 372 0.0 355
ORI10020010 84.409 372 47 11 1 367 7 372 0.0 355
ORI10020009 84.409 372 47 11 1 367 372 7 0.0 355
ORI96000438 83.905 379 49 12 1 374 7 378 0.0 351
ORI96000437 83.905 379 49 12 1 374 7 378 0.0 351
ORI96000436 83.905 379 49 12 1 374 7 378 0.0 351
ORI96000422 83.905 379 49 12 1 374 372 1 0.0 351
ORI96000416 83.905 379 49 12 1 374 372 1 0.0 351
ORI96000409 83.905 379 49 12 1 374 372 1 0.0 351
ORI96000404 83.905 379 49 12 1 374 372 1 0.0 351
ORI96000402 83.905 379 49 12 1 374 372 1 0.0 351
ORI93020102 83.905 379 49 12 1 374 7 378 0.0 351
ORI93020099 83.905 379 49 12 1 374 372 1 0.0 351
ORI96000367 83.905 379 49 12 1 374 372 1 0.0 351
ORI93020098 83.905 379 49 12 1 374 372 1 0.0 351
ORI93020096 83.905 379 49 12 1 374 7 378 0.0 351
ORI93020093 83.905 379 49 12 1 374 372 1 0.0 351
ORI94030301 83.905 379 49 12 1 374 372 1 0.0 351
ORI94030299 83.905 379 49 12 1 374 372 1 0.0 351
ORI94030298 83.905 379 49 12 1 374 372 1 0.0 351
ORI92720078 83.905 379 49 12 1 374 372 1 0.0 351
ORI92720076 83.905 379 49 12 1 374 372 1 0.0 351
ORI92330207 83.905 379 49 12 1 374 7 378 0.0 351
ORI92320058 83.905 379 49 12 1 374 7 378 0.0 351
ORI92220053 83.905 379 49 12 1 374 372 1 0.0 351
ORI50020036 83.905 379 49 12 1 374 372 1 0.0 351
ORI10020028 83.905 379 49 12 1 374 372 1 0.0 351
ORI10020005 83.905 379 49 12 1 374 372 1 0.0 351
ORI10020004 83.905 379 49 12 1 374 372 1 0.0 351
ORI94030400 84.054 370 52 7 1 367 372 7 0.0 350
ORI93020104 83.862 378 50 11 1 374 371 1 0.0 350
ORI93020103 83.905 379 48 13 1 374 7 377 0.0 350
ORI92520071 84.14 372 48 11 1 367 7 372 0.0 350
ORI92230183 84.14 372 48 11 1 367 372 7 0.0 350
ORI10020023 84.14 372 48 11 1 367 372 7 0.0 350
ORI96000417 83.641 379 50 12 1 374 372 1 0.0 346
ORI96000415 83.641 379 50 12 1 374 372 1 0.0 346
ORI96000410 83.641 379 50 12 1 374 372 1 0.0 346
ORI96000407 83.641 379 50 12 1 374 372 1 0.0 346
ORI96000406 83.641 379 50 12 1 374 372 1 0.0 346
ORI95030447 83.641 379 50 12 1 374 7 378 0.0 346
ORI96000365 83.641 379 50 12 1 374 372 1 0.0 346
ORI94030300 83.641 379 50 12 1 374 372 1 0.0 346
ORI92720079 83.641 379 50 12 1 374 372 1 0.0 346
ORI92220052 83.641 379 50 12 1 374 372 1 0.0 346
ORI30020033 83.641 379 50 12 1 374 372 1 0.0 346
ORI92520070 83.871 372 49 11 1 367 372 7 0.0 344
ORI96000413 83.377 379 51 12 1 374 372 1 0.0 340
ORI96000412 83.377 379 51 12 1 374 372 1 0.0 340
ORI96000403 83.377 379 51 12 1 374 372 1 0.0 340
ORI96000390 83.377 379 51 12 1 374 372 1 0.0 340
ORI10030036 83.377 379 51 12 1 374 7 378 0.0 340
ORI10020012 83.377 379 51 12 1 374 372 1 0.0 340
ORI10030030 83.377 379 51 12 1 374 372 1 0.0 340
ORI30020034 83.113 379 52 12 1 374 453 82 0.0 335
ORI10030084 83.113 379 52 12 1 374 7 378 0.0 335
ORI92230170 83.333 372 51 10 1 367 372 7 0.0 333
ORI94030323 82.804 378 56 9 1 373 10 383 0.0 329
ORI93020111 82.804 378 55 9 1 374 10 381 0.0 329
ORI92520072 82.804 378 55 9 1 374 10 381 0.0 329
ORI94030388 83.425 362 51 9 17 374 357 1 0.0 327
ORI92230179 82.114 369 56 10 3 367 9 371 0.0 307
ORI96000423 83.566 286 36 11 52 332 52 331 0.0 257
ORI94030361 79.752 242 32 14 89 322 283 51 3.35e-40 159
ORI80020043 79.012 243 34 14 88 322 284 51 2.02e-37 150
ORI96020517 81.579 190 22 11 89 273 98 279 9.39e-36 145