RefSeq NC_016831.1
Accession number NC_016831.1
DoriC accession number ORI95030441
OriC length 396 nt
OriC AT content 0.568182
The location of oriC region 3728993..3729388 nt
Browse in NCBI
OriC map
OriC sequences
mioCATTAATTTACTCAAATAAGTGTAAAGATCGTGCGATCCATTGTGGATAAATCTGGTGGAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGTTCACTTTTTGAGTTGTGTATAAGTACCCGTTTTGATCCCAGCTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTTCCAACGCATTGATCTTTATTACAGGATCCGGGTTATCCACAGCCTGGCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCGGATCCCGGGGCTTTCTCCATCGGCTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCACACCGCGTTATGCGAGGCAATTACCgidA
mioCATTAATTTACTCAAATAAGTGTAAAGATCGTGCGATCCATTGTGGATAAATCTGGTGGAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGTTCACTTTTTGAGTTGTGTATAAGTACCCGTTTTGATCCCAGCTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTTCCAACGCATTGATCTTTATTACAGGATCCGGGTTATCCACAGCCTGGCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCGGATCCCGGGGCTTTCTCCATCGGCTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCACACCGCGTTATGCGAGGCAATTACCgidA
mioCATTAATTTACTCAAATAAGTGTAAAGATCGTGCGATCCATTGTGGATAAATCTGGTGGAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGTTCACTTTTTGAGTTGTGTATAAGTACCCGTTTTGATCCCAGCTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTTCCAACGCATTGATCTTTATTACAGGATCCGGGTTATCCACAGCCTGGCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCGGATCCCGGGGCTTTCTCCATCGGCTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCACACCGCGTTATGCGAGGCAATTACCgidA
mioCATTAATTTACTCAAATAAGTGTAAAGATCGTGCGATCCATTGTGGATAAATCTGGTGGAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGTTCACTTTTTGAGTTGTGTATAAGTACCCGTTTTGATCCCAGCTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTTCCAACGCATTGATCTTTATTACAGGATCCGGGTTATCCACAGCCTGGCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCGGATCCCGGGGCTTTCTCCATCGGCTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCACACCGCGTTATGCGAGGCAATTACCgidA
mioCATTAATTTACTCAAATAAGTGTAAAGATCGTGCGATCCATTGTGGATAAATCTGGTGGAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGTTCACTTTTTGAGTTGTGTATAAGTACCCGTTTTGATCCCAGCTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTTCCAACGCATTGATCTTTATTACAGGATCCGGGTTATCCACAGCCTGGCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCGGATCCCGGGGCTTTCTCCATCGGCTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCACACCGCGTTATGCGAGGCAATTACCgidA
mioCATTAATTTACTCAAATAAGTGTAAAGATCGTGCGATCCATTGTGGATAAATCTGGTGGAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGTTCACTTTTTGAGTTGTGTATAAGTACCCGTTTTGATCCCAGCTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTTCCAACGCATTGATCTTTATTACAGGATCCGGGTTATCCACAGCCTGGCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCGGATCCCGGGGCTTTCTCCATCGGCTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCACACCGCGTTATGCGAGGCAATTACCgidA
mioCATTAATTTACTCAAATAAGTGTAAAGATCGTGCGATCCATTGTGGATAAATCTGGTGGAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGTTCACTTTTTGAGTTGTGTATAAGTACCCGTTTTGATCCCAGCTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTTCCAACGCATTGATCTTTATTACAGGATCCGGGTTATCCACAGCCTGGCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCGGATCCCGGGGCTTTCTCCATCGGCTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCACACCGCGTTATGCGAGGCAATTACCgidA
miocATTAATTTACTCAAATAAGTGTAAAGATCGTGCGATCCATTGTGGATAAATCTGGTGGAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGTTCACTTTTTGAGTTGTGTATAAGTACCCGTTTTGATCCCAGCTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTTCCAACGCATTGATCTTTATTACAGGATCCGGGTTATCCACAGCCTGGCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCGGATCCCGGGGCTTTCTCCATCGGCTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCACACCGCGTTATGCGAGGCAATTACCgida
mioCATTAATTTACTCAAATAAGTGTAAAGATCGTGCGATCCATTGTGGATAAATCTGGTGGAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGTTCACTTTTTGAGTTGTGTATAAGTACCCGTTTTGATCCCAGCTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTTCCAACGCATTGATCTTTATTACAGGATCCGGGTTATCCACAGCCTGGCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCGGATCCCGGGGCTTTCTCCATCGGCTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCACACCGCGTTATGCGAGGCAATTACCgidA
mioCATTAATTTACTCAAATAAGTGTAAAGATCGTGCGATCCATTGTGGATAAATCTGGTGGAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGTTCACTTTTTGAGTTGTGTATAAGTACCCGTTTTGATCCCAGCTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTTCCAACGCATTGATCTTTATTACAGGATCCGGGTTATCCACAGCCTGGCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCGGATCCCGGGGCTTTCTCCATCGGCTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCACACCGCGTTATGCGAGGCAATTACCgidA
mioCATTAATTTACTCAAATAAGTGTAAAGATCGTGCGATCCATTGTGGATAAATCTGGTGGAAAGCTTGGATCAACCGGTAGTTATCCAAAGAATAACCGTTGTTCACTTTTTGAGTTGTGTATAAGTACCCGTTTTGATCCCAGCTTATACGGGCCACGATCACCGATCATTCACAGCTAGTGATCCTTTCCAACGCATTGATCTTTATTACAGGATCCGGGTTATCCACAGCCTGGCGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAAAAGATCTTCTTTTTAATAGCCCGGATCCCGGGGCTTTCTCCATCGGCTAAAGTTGAGTAGAATCCACCGCCCGGGCTTCAATCCATTTTCACACCGCGTTATGCGAGGCAATTACCgidA
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif TCCAHMGCCYGGATC

StartP-valueSite
2246.03e-08ATCCGGGTTATCCACAGCCTGGCGCGATCCTAATA
565.78e-07ATAAATCTGGTGGAAAGCTTGGATCAACCGGTAGT
1886.40e-07AGTGATCCTTTCCAACGCATTGATCTTTATTACAG
2938.18e-07GATCTTCTTTTTAATAGCCCGGATCCCGGGGCTTT
3439.46e-07TTGAGTAGAATCCACCGCCCGGGCTTCAATCCATT

Motif ACMBSKHGTKATCC

StartP-valueSite
1723.48e-09CCGATCATTCACAGCTAGTGATCCTTTCCAACGC
722.77e-07GCTTGGATCAACCGGTAGTTATCCAAAGAATAAC
1261.20e-06GTGTATAAGTACCCGTTTTGATCCCAGCTTATAC
3711.73e-06ATCCATTTTCACACCGCGTTATGCGAGGCAATTA
252.98e-06ATAAGTGTAAAGATCGTGCGATCCATTGTGGATA

Motif CGGGSC

StartP-valueSite
3098.49e-05GCCCGGATCCCGGGGCTTTCTCCATC
1491.86e-04CCAGCTTATACGGGCCACGATCACCG
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI95030441 100.0 396 0 0 1 396 1 396 0.0 732
ORI92720083 100.0 378 0 0 19 396 378 1 0.0 699
ORI92520073 100.0 378 0 0 19 396 378 1 0.0 699
ORI92520064 100.0 378 0 0 19 396 378 1 0.0 699
ORI95020132 99.735 378 1 0 19 396 378 1 0.0 693
ORI92520071 99.735 378 1 0 19 396 1 378 0.0 693
ORI92520068 99.735 378 1 0 19 396 378 1 0.0 693
ORI92230183 99.735 378 1 0 19 396 378 1 0.0 693
ORI10020023 99.735 378 1 0 19 396 378 1 0.0 693
ORI10020009 99.735 378 1 0 19 396 378 1 0.0 693
ORI95030469 99.735 377 1 0 20 396 377 1 0.0 691
ORI95030444 99.735 377 1 0 20 396 377 1 0.0 691
ORI95030443 99.735 377 1 0 20 396 377 1 0.0 691
ORI95030442 99.735 377 1 0 20 396 377 1 0.0 691
ORI95020131 99.735 377 1 0 20 396 377 1 0.0 691
ORI95030436 99.735 377 1 0 20 396 377 1 0.0 691
ORI96000399 99.471 378 2 0 19 396 378 1 0.0 688
ORI92520070 99.471 378 2 0 19 396 378 1 0.0 688
ORI92520067 99.471 378 2 0 19 396 378 1 0.0 688
ORI92520066 99.471 378 2 0 19 396 378 1 0.0 688
ORI92520065 99.471 378 2 0 19 396 378 1 0.0 688
ORI10020021 99.471 378 2 0 19 396 378 1 0.0 688
ORI95020129 98.677 378 5 0 19 396 1 378 0.0 671
ORI10020015 98.677 378 5 0 19 396 1 378 0.0 671
ORI10020010 98.677 378 5 0 19 396 1 378 0.0 671
ORI94030400 94.18 378 22 0 19 396 378 1 0.0 577
ORI92230179 92.857 378 26 1 19 396 1 377 0.0 547
ORI93030277 91.557 379 30 2 19 396 1 378 0.0 521
ORI92230170 88.032 376 37 5 25 396 372 1 0.0 438
ORI96000401 87.366 372 47 0 25 396 372 1 0.0 427
ORI94030303 87.366 372 47 0 25 396 372 1 0.0 427
ORI96000414 86.828 372 49 0 25 396 372 1 0.0 416
ORI96000411 86.828 372 49 0 25 396 372 1 0.0 416
ORI93020113 86.828 372 49 0 25 396 372 1 0.0 416
ORI94030302 86.828 372 49 0 25 396 372 1 0.0 416
ORI92720080 86.828 372 49 0 25 396 372 1 0.0 416
ORI92320059 86.828 372 49 0 25 396 372 1 0.0 416
ORI96000422 86.559 372 50 0 25 396 372 1 0.0 411
ORI96000408 86.559 372 50 0 25 396 372 1 0.0 411
ORI96000406 86.559 372 50 0 25 396 372 1 0.0 411
ORI96000405 86.559 372 50 0 25 396 372 1 0.0 411
ORI96000400 86.243 378 52 0 19 396 1 378 0.0 411
ORI96000390 86.559 372 50 0 25 396 372 1 0.0 411
ORI93020099 86.559 372 50 0 25 396 372 1 0.0 411
ORI93020090 86.559 372 50 0 25 396 372 1 0.0 411
ORI96000365 86.559 372 50 0 25 396 372 1 0.0 411
ORI92720076 86.559 372 50 0 25 396 372 1 0.0 411
ORI92330196 86.559 372 50 0 25 396 372 1 0.0 411
ORI92220052 86.559 372 50 0 25 396 372 1 0.0 411
ORI96000364 86.243 378 52 0 19 396 1 378 0.0 411
ORI10030070 86.243 378 52 0 19 396 1 378 0.0 411
ORI10030036 86.243 378 52 0 19 396 1 378 0.0 411
ORI10030030 86.559 372 50 0 25 396 372 1 0.0 411
ORI10020005 86.559 372 50 0 25 396 372 1 0.0 411
ORI10020004 86.559 372 50 0 25 396 372 1 0.0 411
ORI10020002 86.559 372 50 0 25 396 372 1 0.0 411
ORI10020001 86.243 378 52 0 19 396 1 378 0.0 411
ORI96000438 85.979 378 53 0 19 396 1 378 0.0 405
ORI96000437 85.979 378 53 0 19 396 1 378 0.0 405
ORI96000436 85.979 378 53 0 19 396 1 378 0.0 405
ORI96000416 86.29 372 51 0 25 396 372 1 0.0 405
ORI96000409 86.29 372 51 0 25 396 372 1 0.0 405
ORI96000368 86.29 372 51 0 25 396 372 1 0.0 405
ORI93020102 85.979 378 53 0 19 396 1 378 0.0 405
ORI96000367 86.29 372 51 0 25 396 372 1 0.0 405
ORI93020098 86.29 372 51 0 25 396 372 1 0.0 405
ORI93020096 85.979 378 53 0 19 396 1 378 0.0 405
ORI93020093 86.29 372 51 0 25 396 372 1 0.0 405
ORI94030301 86.29 372 51 0 25 396 372 1 0.0 405
ORI94030298 86.29 372 51 0 25 396 372 1 0.0 405
ORI92720079 86.29 372 51 0 25 396 372 1 0.0 405
ORI92720078 86.29 372 51 0 25 396 372 1 0.0 405
ORI92330207 85.979 378 53 0 19 396 1 378 0.0 405
ORI92320058 85.979 378 53 0 19 396 1 378 0.0 405
ORI92220053 86.29 372 51 0 25 396 372 1 0.0 405
ORI30020034 86.29 372 51 0 25 396 453 82 0.0 405
ORI10030083 85.979 378 53 0 19 396 1 378 0.0 405
ORI93020104 86.29 372 50 1 25 396 371 1 0.0 403
ORI96000417 86.022 372 52 0 25 396 372 1 0.0 399
ORI96000415 86.022 372 52 0 25 396 372 1 0.0 399
ORI96000410 86.022 372 52 0 25 396 372 1 0.0 399
ORI96000407 86.022 372 52 0 25 396 372 1 0.0 399
ORI96000404 86.022 372 52 0 25 396 372 1 0.0 399
ORI96000402 86.022 372 52 0 25 396 372 1 0.0 399
ORI95030447 85.714 378 54 0 19 396 1 378 0.0 399
ORI94030299 86.022 372 52 0 25 396 372 1 0.0 399
ORI50020036 86.022 372 52 0 25 396 372 1 0.0 399
ORI30020033 86.022 372 52 0 25 396 372 1 0.0 399
ORI10020028 86.022 372 52 0 25 396 372 1 0.0 399
ORI93020103 85.752 379 51 3 19 396 1 377 0.0 398
ORI96000413 85.753 372 53 0 25 396 372 1 0.0 394
ORI96000412 85.753 372 53 0 25 396 372 1 0.0 394
ORI96000403 85.753 372 53 0 25 396 372 1 0.0 394
ORI10020012 85.753 372 53 0 25 396 372 1 0.0 394
ORI94030300 85.484 372 54 0 25 396 372 1 0.0 388
ORI10030084 85.185 378 56 0 19 396 1 378 0.0 388
ORI94030323 84.514 381 47 9 17 390 2 377 0.0 366
ORI96000432 84.409 372 47 11 25 390 1 367 0.0 355
ORI96000434 83.113 379 53 7 17 390 2 374 0.0 335
ORI96000393 83.289 377 50 9 20 390 377 8 0.0 335
ORI95020130 83.245 376 52 7 20 390 377 8 0.0 335
ORI93020089 83.245 376 52 7 20 390 377 8 0.0 335
ORI92020049 83.245 376 52 7 20 390 377 8 0.0 335
ORI93020120 83.288 371 53 8 25 390 1 367 0.0 333
ORI94030388 82.776 389 45 18 20 396 379 1 0.0 327
ORI93020111 82.245 383 62 5 17 396 2 381 0.0 326
ORI92520072 82.245 383 62 5 17 396 2 381 0.0 326
ORI95020126 82.527 372 54 11 25 390 1 367 0.0 316
ORI96000429 82.258 372 55 10 25 390 1 367 0.0 311
ORI95020123 81.941 371 58 9 25 390 1 367 0.0 305
ORI96000423 84.536 291 41 4 67 355 43 331 0.0 285
ORI94030317 77.366 243 45 9 71 308 327 90 6e-33 135