RefSeq NC_007384.1
Accession number NC_007384.1
DoriC accession number ORI10030070
OriC length 378 nt
OriC AT content 0.563492
The location of oriC region 4086380..4086757 nt
Browse in NCBI
OriC map
OriC sequences
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGTAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGTAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGTAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGTAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGTAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGTAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGTAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
miocGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGTAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgida
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGTAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGTAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGTAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif CHAGGATCMMCGG

StartP-valueSite
1354.81e-07CTTATACGGTCCAGGATCACCGATCATTCACAG
2825.11e-07TTTTTAATACCCAGGATCCCAGGTCTTTCTCAA
676.23e-07GGTAGTTATCCAAGGAACAACGGTTGTTCAGTT
451.28e-06TGTCAGGAAGCTTGGATCAACCGGTAGTTATCC
3191.81e-06ACAAAGTTGAGTAGAATCCACGGCCCGGGCTTC

Motif GATCYT

StartP-valueSite
2212.57e-04AGGGTAGTGCGATCCTAATAAGAGAT
1952.57e-04TTAAAAGCCGGATCCTTGTTATCCAC
1632.57e-04CACAGTTAATGATCCTTTCCAGGTTG
2655.70e-04TAAATAAATAGATCTTCTTTTTAATA
1815.70e-04CCAGGTTGTTGATCTTAAAAGCCGGA

Motif AAGCCG

StartP-valueSite
3031.72e-04GGTCTTTCTCAAGCCGACAAAGTTGA
1891.72e-04TTGATCTTAAAAGCCGGATCCTTGTT
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI10030070 100.0 378 0 0 1 378 1 378 0.0 699
ORI96000416 99.735 378 1 0 1 378 378 1 0.0 693
ORI96000409 99.735 378 1 0 1 378 378 1 0.0 693
ORI93020102 99.735 378 1 0 1 378 1 378 0.0 693
ORI96000367 99.735 378 1 0 1 378 378 1 0.0 693
ORI93020098 99.735 378 1 0 1 378 378 1 0.0 693
ORI93020096 99.735 378 1 0 1 378 1 378 0.0 693
ORI93020093 99.735 378 1 0 1 378 378 1 0.0 693
ORI94030298 99.735 378 1 0 1 378 378 1 0.0 693
ORI92330207 99.735 378 1 0 1 378 1 378 0.0 693
ORI92320058 99.735 378 1 0 1 378 1 378 0.0 693
ORI93020104 99.735 378 0 1 1 378 377 1 0.0 691
ORI96000417 99.471 378 2 0 1 378 378 1 0.0 688
ORI96000415 99.471 378 2 0 1 378 378 1 0.0 688
ORI96000407 99.471 378 2 0 1 378 378 1 0.0 688
ORI95030447 99.471 378 2 0 1 378 1 378 0.0 688
ORI92220052 99.471 378 2 0 1 378 378 1 0.0 688
ORI93020103 99.471 378 1 1 1 378 1 377 0.0 686
ORI96000438 99.206 378 3 0 1 378 1 378 0.0 682
ORI96000437 99.206 378 3 0 1 378 1 378 0.0 682
ORI96000436 99.206 378 3 0 1 378 1 378 0.0 682
ORI96000414 99.206 378 3 0 1 378 378 1 0.0 682
ORI96000411 99.206 378 3 0 1 378 378 1 0.0 682
ORI96000408 99.206 378 3 0 1 378 378 1 0.0 682
ORI96000405 99.206 378 3 0 1 378 378 1 0.0 682
ORI96000400 99.206 378 3 0 1 378 1 378 0.0 682
ORI93020113 99.206 378 3 0 1 378 378 1 0.0 682
ORI93020090 99.206 378 3 0 1 378 378 1 0.0 682
ORI94030302 99.206 378 3 0 1 378 378 1 0.0 682
ORI94030301 99.206 378 3 0 1 378 378 1 0.0 682
ORI92720080 99.206 378 3 0 1 378 378 1 0.0 682
ORI92720078 99.206 378 3 0 1 378 378 1 0.0 682
ORI92320059 99.206 378 3 0 1 378 378 1 0.0 682
ORI92330196 99.206 378 3 0 1 378 378 1 0.0 682
ORI92220053 99.206 378 3 0 1 378 378 1 0.0 682
ORI96000364 99.206 378 3 0 1 378 1 378 0.0 682
ORI10020002 99.206 378 3 0 1 378 378 1 0.0 682
ORI10020001 99.206 378 3 0 1 378 1 378 0.0 682
ORI96000422 98.942 378 4 0 1 378 378 1 0.0 676
ORI96000410 98.942 378 4 0 1 378 378 1 0.0 676
ORI96000406 98.942 378 4 0 1 378 378 1 0.0 676
ORI96000401 98.942 378 4 0 1 378 378 1 0.0 676
ORI96000368 98.942 378 4 0 1 378 378 1 0.0 676
ORI93020099 98.942 378 4 0 1 378 378 1 0.0 676
ORI96000365 98.942 378 4 0 1 378 378 1 0.0 676
ORI94030303 98.942 378 4 0 1 378 378 1 0.0 676
ORI92720076 98.942 378 4 0 1 378 378 1 0.0 676
ORI30020033 98.942 378 4 0 1 378 378 1 0.0 676
ORI10030084 98.942 378 4 0 1 378 1 378 0.0 676
ORI10030083 98.942 378 4 0 1 378 1 378 0.0 676
ORI10020005 98.942 378 4 0 1 378 378 1 0.0 676
ORI10020004 98.942 378 4 0 1 378 378 1 0.0 676
ORI96000413 98.677 378 5 0 1 378 378 1 0.0 671
ORI96000412 98.677 378 5 0 1 378 378 1 0.0 671
ORI96000404 98.677 378 5 0 1 378 378 1 0.0 671
ORI96000403 98.677 378 5 0 1 378 378 1 0.0 671
ORI96000402 98.677 378 5 0 1 378 378 1 0.0 671
ORI94030299 98.677 378 5 0 1 378 378 1 0.0 671
ORI92720079 98.677 378 5 0 1 378 378 1 0.0 671
ORI50020036 98.677 378 5 0 1 378 378 1 0.0 671
ORI10020028 98.677 378 5 0 1 378 378 1 0.0 671
ORI10020012 98.677 378 5 0 1 378 378 1 0.0 671
ORI96000390 98.413 378 6 0 1 378 378 1 0.0 665
ORI94030300 98.413 378 6 0 1 378 378 1 0.0 665
ORI10030036 98.413 378 6 0 1 378 1 378 0.0 665
ORI10030030 98.413 378 6 0 1 378 378 1 0.0 665
ORI30020034 98.148 378 7 0 1 378 459 82 0.0 660
ORI93030277 89.737 380 35 4 1 378 1 378 0.0 483
ORI92230170 88.441 372 43 0 7 378 372 1 0.0 449
ORI96000399 87.097 372 48 0 7 378 372 1 0.0 422
ORI92520066 87.097 372 48 0 7 378 372 1 0.0 422
ORI92520065 87.097 372 48 0 7 378 372 1 0.0 422
ORI92520068 86.828 372 49 0 7 378 372 1 0.0 416
ORI94030323 86.737 377 42 8 1 372 4 377 0.0 412
ORI95030469 86.559 372 50 0 7 378 372 1 0.0 411
ORI95030444 86.559 372 50 0 7 378 372 1 0.0 411
ORI95020132 86.559 372 50 0 7 378 372 1 0.0 411
ORI95030443 86.559 372 50 0 7 378 372 1 0.0 411
ORI95030442 86.559 372 50 0 7 378 372 1 0.0 411
ORI95020131 86.559 372 50 0 7 378 372 1 0.0 411
ORI95020129 86.28 379 50 2 1 378 1 378 0.0 411
ORI95030441 86.243 378 52 0 1 378 19 396 0.0 411
ORI95030436 86.559 372 50 0 7 378 372 1 0.0 411
ORI92720083 86.559 372 50 0 7 378 372 1 0.0 411
ORI92520073 86.559 372 50 0 7 378 372 1 0.0 411
ORI92520067 86.559 372 50 0 7 378 372 1 0.0 411
ORI92520064 86.559 372 50 0 7 378 372 1 0.0 411
ORI10020021 86.559 372 50 0 7 378 372 1 0.0 411
ORI10020015 86.28 379 50 2 1 378 1 378 0.0 411
ORI10020010 86.28 379 50 2 1 378 1 378 0.0 411
ORI10020009 86.559 372 50 0 7 378 372 1 0.0 411
ORI92520071 85.979 378 53 0 1 378 1 378 0.0 405
ORI92230183 86.29 372 51 0 7 378 372 1 0.0 405
ORI10020023 86.29 372 51 0 7 378 372 1 0.0 405
ORI94030400 86.059 373 50 2 7 378 372 1 0.0 399
ORI92520070 86.022 372 52 0 7 378 372 1 0.0 399
ORI96000434 85.864 382 40 11 4 378 7 381 0.0 394
ORI95020130 86.016 379 39 11 7 378 372 1 0.0 394
ORI93020089 86.016 379 39 11 7 378 372 1 0.0 394
ORI92020049 86.016 379 39 11 7 378 372 1 0.0 394
ORI96000393 85.752 379 40 11 7 378 372 1 0.0 388
ORI92230179 85.829 374 44 8 9 378 9 377 0.0 388
ORI92520072 85.302 381 44 11 4 378 7 381 0.0 383
ORI94030388 85.87 368 39 13 18 378 362 1 0.0 379
ORI93020111 85.039 381 45 11 4 378 7 381 0.0 377
ORI96000432 84.169 379 48 12 7 378 1 374 0.0 357
ORI93020120 81.53 379 58 11 7 378 1 374 0.0 302
ORI95020126 81.217 378 61 10 7 378 1 374 0.0 296
ORI95020123 81.167 377 63 8 7 378 1 374 0.0 296
ORI96000429 81.003 379 60 12 7 378 1 374 0.0 291
ORI96000423 80.137 292 52 5 49 337 43 331 0.0 213
ORI93020094 76.543 243 46 10 53 290 53 289 4.45e-29 122