RefSeq NC_013361.1
Accession number NC_013361.1
DoriC accession number ORI93020103
OriC length 377 nt
OriC AT content 0.559682
The location of oriC region 4857493..4857869 nt
Browse in NCBI
OriC map
OriC sequences
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCCGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCCGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCCGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCCGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCCGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCCGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCCGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
miocGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCCGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgida
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCCGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCCGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
mioCGTATACAGATCGTGCGATCTACTGTGGATAACTCTGTCAGGAAGCTTGGATCAACCGGTAGTTATCCAAGGAACAACGGTTGTTCAGTTTTTGAGTTGTGTATAACCCCTCATTCTGATCCCAGCTTATACGGTCCAGGATCACCGATCATTCACAGTTAATGATCCTTTCCCGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTTCTCAAGCCGACAAAGTTGAGTAGAATCCACGGCCCGGGCTTCAATCCATTTTCATACCGCGTTATGCGAGGCAATCACCgidA
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif CHAGGATCMMCGG

StartP-valueSite
1354.54e-07CTTATACGGTCCAGGATCACCGATCATTCACAG
2815.70e-07TTTTTAATACCCAGGATCCCAGGTCTTTCTCAA
675.70e-07GGTAGTTATCCAAGGAACAACGGTTGTTCAGTT
451.35e-06TGTCAGGAAGCTTGGATCAACCGGTAGTTATCC
3181.89e-06ACAAAGTTGAGTAGAATCCACGGCCCGGGCTTC

Motif GATCYT

StartP-valueSite
2202.58e-04CAGGGAGTGCGATCCTAATAAGAGAT
1952.58e-04TTAAAAGCCGGATCCTTGTTATCCAC
1632.58e-04CACAGTTAATGATCCTTTCCCGGTTG
2645.66e-04TAAATAAATAGATCTTCTTTTTAATA
1815.66e-04CCCGGTTGTTGATCTTAAAAGCCGGA

Motif CAGGRAG

StartP-valueSite
2102.97e-05TTGTTATCCACAGGGAGTGCGATCCTA
386.97e-05ATAACTCTGTCAGGAAGCTTGGATCAA
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI93020103 100.0 377 0 0 1 377 1 377 0.0 697
ORI93020104 99.735 377 1 0 1 377 377 1 0.0 691
ORI96000416 99.471 378 1 1 1 377 378 1 0.0 686
ORI96000409 99.471 378 1 1 1 377 378 1 0.0 686
ORI93020102 99.471 378 1 1 1 377 1 378 0.0 686
ORI96000367 99.471 378 1 1 1 377 378 1 0.0 686
ORI93020098 99.471 378 1 1 1 377 378 1 0.0 686
ORI93020096 99.471 378 1 1 1 377 1 378 0.0 686
ORI93020093 99.471 378 1 1 1 377 378 1 0.0 686
ORI94030298 99.471 378 1 1 1 377 378 1 0.0 686
ORI92330207 99.471 378 1 1 1 377 1 378 0.0 686
ORI92320058 99.471 378 1 1 1 377 1 378 0.0 686
ORI10030070 99.471 378 1 1 1 377 1 378 0.0 686
ORI96000417 99.206 378 2 1 1 377 378 1 0.0 680
ORI96000415 99.206 378 2 1 1 377 378 1 0.0 680
ORI96000407 99.206 378 2 1 1 377 378 1 0.0 680
ORI95030447 99.206 378 2 1 1 377 1 378 0.0 680
ORI92220052 99.206 378 2 1 1 377 378 1 0.0 680
ORI96000438 98.942 378 3 1 1 377 1 378 0.0 675
ORI96000437 98.942 378 3 1 1 377 1 378 0.0 675
ORI96000436 98.942 378 3 1 1 377 1 378 0.0 675
ORI96000414 98.942 378 3 1 1 377 378 1 0.0 675
ORI96000411 98.942 378 3 1 1 377 378 1 0.0 675
ORI96000408 98.942 378 3 1 1 377 378 1 0.0 675
ORI96000405 98.942 378 3 1 1 377 378 1 0.0 675
ORI96000400 98.942 378 3 1 1 377 1 378 0.0 675
ORI93020113 98.942 378 3 1 1 377 378 1 0.0 675
ORI93020090 98.942 378 3 1 1 377 378 1 0.0 675
ORI94030302 98.942 378 3 1 1 377 378 1 0.0 675
ORI94030301 98.942 378 3 1 1 377 378 1 0.0 675
ORI92720080 98.942 378 3 1 1 377 378 1 0.0 675
ORI92720078 98.942 378 3 1 1 377 378 1 0.0 675
ORI92320059 98.942 378 3 1 1 377 378 1 0.0 675
ORI92330196 98.942 378 3 1 1 377 378 1 0.0 675
ORI92220053 98.942 378 3 1 1 377 378 1 0.0 675
ORI96000364 98.942 378 3 1 1 377 1 378 0.0 675
ORI10020002 98.942 378 3 1 1 377 378 1 0.0 675
ORI10020001 98.942 378 3 1 1 377 1 378 0.0 675
ORI96000422 98.677 378 4 1 1 377 378 1 0.0 669
ORI96000410 98.677 378 4 1 1 377 378 1 0.0 669
ORI96000406 98.677 378 4 1 1 377 378 1 0.0 669
ORI96000368 98.677 378 4 1 1 377 378 1 0.0 669
ORI93020099 98.677 378 4 1 1 377 378 1 0.0 669
ORI96000365 98.677 378 4 1 1 377 378 1 0.0 669
ORI92720076 98.677 378 4 1 1 377 378 1 0.0 669
ORI30020033 98.677 378 4 1 1 377 378 1 0.0 669
ORI10030084 98.677 378 4 1 1 377 1 378 0.0 669
ORI10030083 98.677 378 4 1 1 377 1 378 0.0 669
ORI10020005 98.677 378 4 1 1 377 378 1 0.0 669
ORI10020004 98.677 378 4 1 1 377 378 1 0.0 669
ORI96000413 98.413 378 5 1 1 377 378 1 0.0 664
ORI96000412 98.413 378 5 1 1 377 378 1 0.0 664
ORI96000404 98.413 378 5 1 1 377 378 1 0.0 664
ORI96000403 98.413 378 5 1 1 377 378 1 0.0 664
ORI96000402 98.413 378 5 1 1 377 378 1 0.0 664
ORI96000401 98.413 378 5 1 1 377 378 1 0.0 664
ORI94030303 98.413 378 5 1 1 377 378 1 0.0 664
ORI94030299 98.413 378 5 1 1 377 378 1 0.0 664
ORI92720079 98.413 378 5 1 1 377 378 1 0.0 664
ORI50020036 98.413 378 5 1 1 377 378 1 0.0 664
ORI10020028 98.413 378 5 1 1 377 378 1 0.0 664
ORI10020012 98.413 378 5 1 1 377 378 1 0.0 664
ORI96000390 98.148 378 6 1 1 377 378 1 0.0 658
ORI94030300 98.148 378 6 1 1 377 378 1 0.0 658
ORI10030036 98.148 378 6 1 1 377 1 378 0.0 658
ORI10030030 98.148 378 6 1 1 377 378 1 0.0 658
ORI30020034 97.884 378 7 1 1 377 459 82 0.0 652
ORI93030277 89.446 379 37 3 1 377 1 378 0.0 475
ORI92230170 88.441 372 42 1 7 377 372 1 0.0 448
ORI96000399 86.595 373 47 3 7 377 372 1 0.0 409
ORI92520066 86.595 373 47 3 7 377 372 1 0.0 409
ORI92520065 86.595 373 47 3 7 377 372 1 0.0 409
ORI94030323 86.472 377 42 9 1 371 4 377 0.0 405
ORI92520068 86.327 373 48 3 7 377 372 1 0.0 403
ORI95030469 86.059 373 49 3 7 377 372 1 0.0 398
ORI95030444 86.059 373 49 3 7 377 372 1 0.0 398
ORI95020132 86.059 373 49 3 7 377 372 1 0.0 398
ORI95030443 86.059 373 49 3 7 377 372 1 0.0 398
ORI95030442 86.059 373 49 3 7 377 372 1 0.0 398
ORI95020131 86.059 373 49 3 7 377 372 1 0.0 398
ORI95020129 85.789 380 49 5 1 377 1 378 0.0 398
ORI95030441 85.752 379 51 3 1 377 19 396 0.0 398
ORI95030436 86.059 373 49 3 7 377 372 1 0.0 398
ORI92720083 86.059 373 49 3 7 377 372 1 0.0 398
ORI92520073 86.059 373 49 3 7 377 372 1 0.0 398
ORI92520067 86.059 373 49 3 7 377 372 1 0.0 398
ORI92520064 86.059 373 49 3 7 377 372 1 0.0 398
ORI10020021 86.059 373 49 3 7 377 372 1 0.0 398
ORI10020015 85.789 380 49 5 1 377 1 378 0.0 398
ORI10020010 85.789 380 49 5 1 377 1 378 0.0 398
ORI10020009 86.059 373 49 3 7 377 372 1 0.0 398
ORI96000434 85.864 382 39 11 4 377 7 381 0.0 392
ORI95020130 86.016 379 38 11 7 377 372 1 0.0 392
ORI94030400 85.829 374 48 5 7 377 372 1 0.0 392
ORI93020089 86.016 379 38 11 7 377 372 1 0.0 392
ORI92520071 85.488 379 52 3 1 377 1 378 0.0 392
ORI92230183 85.791 373 50 3 7 377 372 1 0.0 392
ORI92020049 86.016 379 38 11 7 377 372 1 0.0 392
ORI10020023 85.791 373 50 3 7 377 372 1 0.0 392
ORI96000393 85.752 379 39 11 7 377 372 1 0.0 387
ORI92520070 85.523 373 51 3 7 377 372 1 0.0 387
ORI92230179 85.523 373 46 7 9 377 9 377 0.0 383
ORI92520072 85.302 381 43 11 4 377 7 381 0.0 381
ORI94030388 85.87 368 38 13 18 377 362 1 0.0 379
ORI93020111 85.039 381 44 11 4 377 7 381 0.0 375
ORI96000432 83.905 379 48 13 7 377 1 374 0.0 350
ORI95020123 81.117 376 64 7 7 377 1 374 0.0 294
ORI93020120 81.51 384 48 17 7 377 1 374 0.0 294
ORI95020126 80.688 378 62 11 7 377 1 374 0.0 283
ORI96000429 80.423 378 63 11 7 377 1 374 0.0 278
ORI96000423 80.205 293 49 8 49 336 43 331 0.0 211
ORI93020094 76.543 243 45 11 53 289 53 289 4.44e-29 122