RefSeq NC_009792.1
Accession number NC_009792.1
DoriC accession number ORI92230170
OriC length 372 nt
OriC AT content 0.55914
The location of oriC region 77514..77885 nt
Browse in NCBI
OriC map
OriC sequences
gidAGGTAATTGCCTCGCATACGGCGGTGTGAAAGTGGATTGAAGCCCGGGTCGTGGATTCTACTCAACTTTAGCCGCTGGAGAAAGTCCCGGGATCCTGGGTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTTTATTGTGATCTCTTATTAGGATCGCGATTGTCTGTGGATAACCAGGATCCGTTGAATAAGATCAACAAGTTGTTGAGGATCATTAGCTGTGAATGATCGGTGATCCTGGCCCGTATAAGCTGGGATCAGAATGAAGGGTTATGCACAACTCAAAAACTGAACACCGGTTGTTCTTTGGATAACTACTGGTTGATCCAAGCTTCTTACCAGAGTTATCCACACTCGATCGCACGATCTmioC
gidAGGTAATTGCCTCGCATACGGCGGTGTGAAAGTGGATTGAAGCCCGGGTCGTGGATTCTACTCAACTTTAGCCGCTGGAGAAAGTCCCGGGATCCTGGGTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTTTATTGTGATCTCTTATTAGGATCGCGATTGTCTGTGGATAACCAGGATCCGTTGAATAAGATCAACAAGTTGTTGAGGATCATTAGCTGTGAATGATCGGTGATCCTGGCCCGTATAAGCTGGGATCAGAATGAAGGGTTATGCACAACTCAAAAACTGAACACCGGTTGTTCTTTGGATAACTACTGGTTGATCCAAGCTTCTTACCAGAGTTATCCACACTCGATCGCACGATCTmioC
gidAGGTAATTGCCTCGCATACGGCGGTGTGAAAGTGGATTGAAGCCCGGGTCGTGGATTCTACTCAACTTTAGCCGCTGGAGAAAGTCCCGGGATCCTGGGTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTTTATTGTGATCTCTTATTAGGATCGCGATTGTCTGTGGATAACCAGGATCCGTTGAATAAGATCAACAAGTTGTTGAGGATCATTAGCTGTGAATGATCGGTGATCCTGGCCCGTATAAGCTGGGATCAGAATGAAGGGTTATGCACAACTCAAAAACTGAACACCGGTTGTTCTTTGGATAACTACTGGTTGATCCAAGCTTCTTACCAGAGTTATCCACACTCGATCGCACGATCTmioC
gidAGGTAATTGCCTCGCATACGGCGGTGTGAAAGTGGATTGAAGCCCGGGTCGTGGATTCTACTCAACTTTAGCCGCTGGAGAAAGTCCCGGGATCCTGGGTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTTTATTGTGATCTCTTATTAGGATCGCGATTGTCTGTGGATAACCAGGATCCGTTGAATAAGATCAACAAGTTGTTGAGGATCATTAGCTGTGAATGATCGGTGATCCTGGCCCGTATAAGCTGGGATCAGAATGAAGGGTTATGCACAACTCAAAAACTGAACACCGGTTGTTCTTTGGATAACTACTGGTTGATCCAAGCTTCTTACCAGAGTTATCCACACTCGATCGCACGATCTmioC
gidAGGTAATTGCCTCGCATACGGCGGTGTGAAAGTGGATTGAAGCCCGGGTCGTGGATTCTACTCAACTTTAGCCGCTGGAGAAAGTCCCGGGATCCTGGGTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTTTATTGTGATCTCTTATTAGGATCGCGATTGTCTGTGGATAACCAGGATCCGTTGAATAAGATCAACAAGTTGTTGAGGATCATTAGCTGTGAATGATCGGTGATCCTGGCCCGTATAAGCTGGGATCAGAATGAAGGGTTATGCACAACTCAAAAACTGAACACCGGTTGTTCTTTGGATAACTACTGGTTGATCCAAGCTTCTTACCAGAGTTATCCACACTCGATCGCACGATCTmioC
gidAGGTAATTGCCTCGCATACGGCGGTGTGAAAGTGGATTGAAGCCCGGGTCGTGGATTCTACTCAACTTTAGCCGCTGGAGAAAGTCCCGGGATCCTGGGTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTTTATTGTGATCTCTTATTAGGATCGCGATTGTCTGTGGATAACCAGGATCCGTTGAATAAGATCAACAAGTTGTTGAGGATCATTAGCTGTGAATGATCGGTGATCCTGGCCCGTATAAGCTGGGATCAGAATGAAGGGTTATGCACAACTCAAAAACTGAACACCGGTTGTTCTTTGGATAACTACTGGTTGATCCAAGCTTCTTACCAGAGTTATCCACACTCGATCGCACGATCTmioC
gidAGGTAATTGCCTCGCATACGGCGGTGTGAAAGTGGATTGAAGCCCGGGTCGTGGATTCTACTCAACTTTAGCCGCTGGAGAAAGTCCCGGGATCCTGGGTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTTTATTGTGATCTCTTATTAGGATCGCGATTGTCTGTGGATAACCAGGATCCGTTGAATAAGATCAACAAGTTGTTGAGGATCATTAGCTGTGAATGATCGGTGATCCTGGCCCGTATAAGCTGGGATCAGAATGAAGGGTTATGCACAACTCAAAAACTGAACACCGGTTGTTCTTTGGATAACTACTGGTTGATCCAAGCTTCTTACCAGAGTTATCCACACTCGATCGCACGATCTmioC
gidaGGTAATTGCCTCGCATACGGCGGTGTGAAAGTGGATTGAAGCCCGGGTCGTGGATTCTACTCAACTTTAGCCGCTGGAGAAAGTCCCGGGATCCTGGGTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTTTATTGTGATCTCTTATTAGGATCGCGATTGTCTGTGGATAACCAGGATCCGTTGAATAAGATCAACAAGTTGTTGAGGATCATTAGCTGTGAATGATCGGTGATCCTGGCCCGTATAAGCTGGGATCAGAATGAAGGGTTATGCACAACTCAAAAACTGAACACCGGTTGTTCTTTGGATAACTACTGGTTGATCCAAGCTTCTTACCAGAGTTATCCACACTCGATCGCACGATCTmioc
gidAGGTAATTGCCTCGCATACGGCGGTGTGAAAGTGGATTGAAGCCCGGGTCGTGGATTCTACTCAACTTTAGCCGCTGGAGAAAGTCCCGGGATCCTGGGTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTTTATTGTGATCTCTTATTAGGATCGCGATTGTCTGTGGATAACCAGGATCCGTTGAATAAGATCAACAAGTTGTTGAGGATCATTAGCTGTGAATGATCGGTGATCCTGGCCCGTATAAGCTGGGATCAGAATGAAGGGTTATGCACAACTCAAAAACTGAACACCGGTTGTTCTTTGGATAACTACTGGTTGATCCAAGCTTCTTACCAGAGTTATCCACACTCGATCGCACGATCTmioC
gidAGGTAATTGCCTCGCATACGGCGGTGTGAAAGTGGATTGAAGCCCGGGTCGTGGATTCTACTCAACTTTAGCCGCTGGAGAAAGTCCCGGGATCCTGGGTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTTTATTGTGATCTCTTATTAGGATCGCGATTGTCTGTGGATAACCAGGATCCGTTGAATAAGATCAACAAGTTGTTGAGGATCATTAGCTGTGAATGATCGGTGATCCTGGCCCGTATAAGCTGGGATCAGAATGAAGGGTTATGCACAACTCAAAAACTGAACACCGGTTGTTCTTTGGATAACTACTGGTTGATCCAAGCTTCTTACCAGAGTTATCCACACTCGATCGCACGATCTmioC
gidAGGTAATTGCCTCGCATACGGCGGTGTGAAAGTGGATTGAAGCCCGGGTCGTGGATTCTACTCAACTTTAGCCGCTGGAGAAAGTCCCGGGATCCTGGGTATTAAAAAGAAGATCTTTTTATTTAGAGATCTGTTTTATTGTGATCTCTTATTAGGATCGCGATTGTCTGTGGATAACCAGGATCCGTTGAATAAGATCAACAAGTTGTTGAGGATCATTAGCTGTGAATGATCGGTGATCCTGGCCCGTATAAGCTGGGATCAGAATGAAGGGTTATGCACAACTCAAAAACTGAACACCGGTTGTTCTTTGGATAACTACTGGTTGATCCAAGCTTCTTACCAGAGTTATCCACACTCGATCGCACGATCTmioC
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif RGGATC

StartP-valueSite
2112.44e-04CAAGTTGTTGAGGATCATTAGCTGTG
1792.44e-04GTGGATAACCAGGATCCGTTGAATAA
1532.44e-04ATCTCTTATTAGGATCGCGATTGTCT
2574.75e-04CGTATAAGCTGGGATCAGAATGAAGG
884.75e-04AGAAAGTCCCGGGATCCTGGGTATTA

Motif CKBTGRATAA

StartP-valueSite
1671.39e-06TCGCGATTGTCTGTGGATAACCAGGATCCG
3083.04e-06ACCGGTTGTTCTTTGGATAACTACTGGTTG
1851.46e-05AACCAGGATCCGTTGAATAAGATCAACAAG
2223.02e-05GGATCATTAGCTGTGAATGATCGGTGATCC
723.24e-05CAACTTTAGCCGCTGGAGAAAGTCCCGGGA

Motif RGCCCG

StartP-valueSite
2431.09e-04CGGTGATCCTGGCCCGTATAAGCTGG
402.23e-04AGTGGATTGAAGCCCGGGTCGTGGAT
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI92230170 100.0 372 0 0 1 372 1 372 0.0 688
ORI93030277 91.421 373 30 2 1 372 378 7 0.0 510
ORI96000414 89.276 373 38 2 1 372 1 372 0.0 466
ORI96000390 89.276 373 38 2 1 372 1 372 0.0 466
ORI93020113 89.276 373 38 2 1 372 1 372 0.0 466
ORI92720080 89.276 373 38 2 1 372 1 372 0.0 466
ORI10030036 89.276 373 38 2 1 372 378 7 0.0 466
ORI10030030 89.276 373 38 2 1 372 1 372 0.0 466
ORI96000422 89.008 373 39 2 1 372 1 372 0.0 460
ORI96000411 89.008 373 39 2 1 372 1 372 0.0 460
ORI96000408 89.008 373 39 2 1 372 1 372 0.0 460
ORI96000405 89.008 373 39 2 1 372 1 372 0.0 460
ORI96000401 89.008 373 39 2 1 372 1 372 0.0 460
ORI96000400 89.008 373 39 2 1 372 378 7 0.0 460
ORI93020099 89.008 373 39 2 1 372 1 372 0.0 460
ORI93020090 89.008 373 39 2 1 372 1 372 0.0 460
ORI94030303 89.008 373 39 2 1 372 1 372 0.0 460
ORI94030302 89.008 373 39 2 1 372 1 372 0.0 460
ORI92720076 89.008 373 39 2 1 372 1 372 0.0 460
ORI92320059 89.008 373 39 2 1 372 1 372 0.0 460
ORI92330196 89.008 373 39 2 1 372 1 372 0.0 460
ORI92220052 89.008 373 39 2 1 372 1 372 0.0 460
ORI30020034 89.008 373 39 2 1 372 82 453 0.0 460
ORI96000364 89.008 373 39 2 1 372 378 7 0.0 460
ORI10030083 89.008 373 39 2 1 372 378 7 0.0 460
ORI10020005 89.008 373 39 2 1 372 1 372 0.0 460
ORI10020004 89.008 373 39 2 1 372 1 372 0.0 460
ORI10020002 89.008 373 39 2 1 372 1 372 0.0 460
ORI10020001 89.008 373 39 2 1 372 378 7 0.0 460
ORI96000416 88.74 373 40 2 1 372 1 372 0.0 455
ORI96000409 88.74 373 40 2 1 372 1 372 0.0 455
ORI96000406 88.71 372 42 0 1 372 1 372 0.0 455
ORI96000404 88.74 373 40 2 1 372 1 372 0.0 455
ORI96000402 88.74 373 40 2 1 372 1 372 0.0 455
ORI96000368 88.74 373 40 2 1 372 1 372 0.0 455
ORI93020102 88.74 373 40 2 1 372 378 7 0.0 455
ORI96000367 88.74 373 40 2 1 372 1 372 0.0 455
ORI93020098 88.74 373 40 2 1 372 1 372 0.0 455
ORI93020096 88.74 373 40 2 1 372 378 7 0.0 455
ORI93020093 88.74 373 40 2 1 372 1 372 0.0 455
ORI96000365 88.71 372 42 0 1 372 1 372 0.0 455
ORI94030299 88.74 373 40 2 1 372 1 372 0.0 455
ORI94030298 88.74 373 40 2 1 372 1 372 0.0 455
ORI92330207 88.74 373 40 2 1 372 378 7 0.0 455
ORI92320058 88.74 373 40 2 1 372 378 7 0.0 455
ORI50020036 88.74 373 40 2 1 372 1 372 0.0 455
ORI10020028 88.74 373 40 2 1 372 1 372 0.0 455
ORI93020104 88.71 372 41 1 1 372 1 371 0.0 453
ORI96000410 88.472 373 41 2 1 372 1 372 0.0 449
ORI94030400 88.564 376 35 8 1 372 1 372 0.0 449
ORI92720079 88.472 373 41 2 1 372 1 372 0.0 449
ORI30020033 88.472 373 41 2 1 372 1 372 0.0 449
ORI10030070 88.441 372 43 0 1 372 378 7 0.0 449
ORI93020103 88.441 372 42 1 1 372 377 7 0.0 448
ORI94030300 88.204 373 42 2 1 372 1 372 0.0 444
ORI96000399 87.936 373 43 2 1 372 1 372 0.0 438
ORI95030441 88.032 376 37 5 1 372 396 25 0.0 438
ORI92720083 88.032 376 37 5 1 372 1 372 0.0 438
ORI92520073 88.032 376 37 5 1 372 1 372 0.0 438
ORI92520066 88.032 376 37 5 1 372 1 372 0.0 438
ORI92520065 87.936 373 43 2 1 372 1 372 0.0 438
ORI92520064 88.032 376 37 5 1 372 1 372 0.0 438
ORI95030469 87.766 376 38 5 1 372 1 372 0.0 433
ORI95030444 87.766 376 38 5 1 372 1 372 0.0 433
ORI95020132 87.766 376 38 5 1 372 1 372 0.0 433
ORI95030443 87.766 376 38 5 1 372 1 372 0.0 433
ORI95030442 87.766 376 38 5 1 372 1 372 0.0 433
ORI95020131 87.766 376 38 5 1 372 1 372 0.0 433
ORI95030436 87.766 376 38 5 1 372 1 372 0.0 433
ORI92520071 87.766 376 38 5 1 372 378 7 0.0 433
ORI92520068 87.766 376 38 5 1 372 1 372 0.0 433
ORI92230183 87.766 376 38 5 1 372 1 372 0.0 433
ORI92230179 87.903 372 40 5 1 370 377 9 0.0 433
ORI10020023 87.766 376 38 5 1 372 1 372 0.0 433
ORI10020009 87.766 376 38 5 1 372 1 372 0.0 433
ORI95020129 87.5 376 39 5 1 372 378 7 0.0 427
ORI92520070 87.5 376 39 5 1 372 1 372 0.0 427
ORI92520067 87.5 376 39 5 1 372 1 372 0.0 427
ORI10020021 87.5 376 39 5 1 372 1 372 0.0 427
ORI10020015 87.5 376 39 5 1 372 378 7 0.0 427
ORI10020010 87.5 376 39 5 1 372 378 7 0.0 427
ORI94030323 85.829 374 39 13 7 372 377 10 0.0 385
ORI96000434 85.135 370 46 8 7 372 374 10 0.0 370
ORI95020130 85.135 370 46 8 7 372 8 372 0.0 370
ORI93020089 85.135 370 46 8 7 372 8 372 0.0 370
ORI92020049 85.135 370 46 8 7 372 8 372 0.0 370
ORI96000393 84.865 370 47 8 7 372 8 372 0.0 364
ORI94030388 84.765 361 46 9 1 356 1 357 0.0 353
ORI96000432 83.333 372 51 10 7 372 367 1 0.0 333
ORI96000429 82.162 370 59 6 7 372 367 1 0.0 311
ORI93020120 82.258 372 55 10 7 372 367 1 0.0 311
ORI95020123 80.759 369 66 5 7 372 367 1 0.0 283
ORI95020126 80.217 369 68 5 7 372 367 1 0.0 272
ORI93020110 77.551 294 43 19 45 326 335 53 4.31e-39 156