RefSeq NC_019085
DoriC accession number pORI00000095
OriC length 2344 nt
OriC AT content 0.5166
The location of oriC region 2689..2043 nt
Browse in NCBI
OriC map
OriC sequences
ATCTATGCCTGTGTTTTTATACAGTAATGACGCCATGGTAAACCTTATGACGTTATGCGTCAAACCCGCCAGTATGACACCTGCAAATGCGTATTAGATCTGGTGTTTCTTCAGCAAGGCACGTAGCTGATGATAAGTCAGACCCAGTAATTCAGCGGCTTTTTTCTGGTTAAATTTAGCCTGCTGTAAGCTGGTTTGTAGAAAGTCTTTCTCTTGCTGCTGCTGGAATTCACGCAGATCCAGCGTTATAACGATGTGTATCCTATGTGCTCGGATTGGATAGATTTCCATTACGGTGAAGGATCTTCTTGAGATCCTTTCTGTGGCGTCGTAATCTCTTGCTCTGTAAACGAAAAAACCGCCCTGCAAGGCGGTTTTTCGAAGGTTCTCAGAGCAGCAACTCTTTGAACCGTGGTAACTGGCTTACGAGGAGCGCAGTAACCAAATCTGTTCTTTCAGTTTAGCCTTAACAGGCGCATAACTTCAAGACTAACTCCTCTAAATCAGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTTCCGGGTTGGACTCAAGATGATAGTTACCGGATAAGGCGCAGCAGTCGGACTGAACGGGGGGTTCGTGCATACAGTCCATCCAGGAGCGAACTGCCTTCGCGGAACTGAGTGTCAGGCGTGGAATGAGATAAACGCGGCCATAACAGCGGAATGACACCGGTAAACCGAAAGGCAGGAATGCGGGGGAGCACGAGGGAGCCACCAGGGGGAAACGCCTGGTATCTTTAAGCCGCATCGGGTTTCGCCACCACTGATTTGAGCGTCAGATTTCATGATGTTTGTCAGGGGGGCGGAGCCTATGGAAAAACGGCTTCGCCGCGGCCTTATCTCTTCCCTGTTAAGCTCCTTCCTGGTATCTCCCAGGAAATTTCCGCCCCGCCTGTAAGCCGGCACCGCTCGCCGCAGCCGAACGACCGAGCGCAGCGAGTCAGTGAGCGAGGAAGCGGAATATATCCTGTACTACATATCCTGCTGACGCGCTGGTGCCGCCTTTTTTCTCCTGCTACATGAAGCACTTCACTGATTTCCACATCCGTGCCAACATAGTCAGCCAGTATACACTCCGCTAGCGCTACGTGACTGGTTCAGGGCTGCGCCCCGAAACCCGCTAACAACCTCTCTGCTACTGGATATCACCCCATGCCATCTGAATATGATGAACAACGGGGTTCGACTGATACGCAGCTTCCCGGCGAATATGACCTTTTTGATTTAATGGCGAAGGTTACTGAAGAGATCCTGCATGCCCCTGTGGATTCTGGGCCGCCTGTCGGCCGGGAAGCGTTATAGCTTTTTCGCTTGCCCGCGTACGTGGTAATACGCCGGTATTACCTTTTATTTCTTTATTTTCATGTAATTACAGTGGGTTTTTAATACCTGGGTATTACTCGTGAAAACGAAACATTACTTTTTTTTCTTTTAATTCATGCAGTTGCGATGAAAATCGCGGCTGCGTTAGGTGTATGACCATTTTGAGGTTGAAAAATAATCAACCATGGCGGGTGATTTACGCAGGTTAAGGGGAGATCGTGACAAAAAAAAGCGTTCCTCACTGTATCGTTCATGCCTGCATGAACGGGTTATTCTTCCTGACTACAGAATTACATCGCTCCTTCAGTTCATACATCACTTTTACAACACTTTTACAACACTCCTTCGGCCTGTACATCACTTTTACAACACTTTTGCATCACTTTTACATCATTTATACATCACTTTTACATCATTCCTTCAGCTCATACGTCACTTTCATCCTCTGTGCCATTTGTACATCACCCCCTTCCTGAACGTGCTGACAGCGGGTTTTCCGGCTGCGCCGGCAACGCTTCACGGCCACGCAATAAATTGCGTCCCCGTTCACCGTTTTCGGATGGGAAGAACGCCGGAAACAGGACTTCCCCTGGCTGAATGGTGTGAATTTCCGCGCTATGCACTTGCGCGCATACTCATGCATGCCGTAAAAACAGAGCCTGCGCGTTTCTGGCGGGTTTTCGGGTGGTTTGTTGCCTGTTTTACCGGTTTCCCGTCAGAAACGCCCTCAGAGCCTCTCAGGCGGTGCACGCAAGGGATGTTATGTTTAATCGGTCTGACCGTCAGGTACAAAAAAAAGCCCTTAGGGGGCTTTTTTTTTGCTATGAGTTAGCCATATTTTCGTGCGAATTTTTCATCGGAATCGCATAGATAAATAATAAACTCAATAAACGCGATGATCGCGGGTATGAATGTCCAGCAAAAAATTAGATACAGGAACCCCTTAAAAGTAAATCGTCAAACGCATCTCCCGGTGTAAACGCTGAA
ATCTATGCCTGTGTTTTTATACAGTAATGACGCCATGGTAAACCTTATGACGTTATGCGTCAAACCCGCCAGTATGACACCTGCAAATGCGTATTAGATCTGGTGTTTCTTCAGCAAGGCACGTAGCTGATGATAAGTCAGACCCAGTAATTCAGCGGCTTTTTTCTGGTTAAATTTAGCCTGCTGTAAGCTGGTTTGTAGAAAGTCTTTCTCTTGCTGCTGCTGGAATTCACGCAGATCCAGCGTTATAACGATGTGTATCCTATGTGCTCGGATTGGATAGATTTCCATTACGGTGAAGGATCTTCTTGAGATCCTTTCTGTGGCGTCGTAATCTCTTGCTCTGTAAACGAAAAAACCGCCCTGCAAGGCGGTTTTTCGAAGGTTCTCAGAGCAGCAACTCTTTGAACCGTGGTAACTGGCTTACGAGGAGCGCAGTAACCAAATCTGTTCTTTCAGTTTAGCCTTAACAGGCGCATAACTTCAAGACTAACTCCTCTAAATCAGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTTCCGGGTTGGACTCAAGATGATAGTTACCGGATAAGGCGCAGCAGTCGGACTGAACGGGGGGTTCGTGCATACAGTCCATCCAGGAGCGAACTGCCTTCGCGGAACTGAGTGTCAGGCGTGGAATGAGATAAACGCGGCCATAACAGCGGAATGACACCGGTAAACCGAAAGGCAGGAATGCGGGGGAGCACGAGGGAGCCACCAGGGGGAAACGCCTGGTATCTTTAAGCCGCATCGGGTTTCGCCACCACTGATTTGAGCGTCAGATTTCATGATGTTTGTCAGGGGGGCGGAGCCTATGGAAAAACGGCTTCGCCGCGGCCTTATCTCTTCCCTGTTAAGCTCCTTCCTGGTATCTCCCAGGAAATTTCCGCCCCGCCTGTAAGCCGGCACCGCTCGCCGCAGCCGAACGACCGAGCGCAGCGAGTCAGTGAGCGAGGAAGCGGAATATATCCTGTACTACATATCCTGCTGACGCGCTGGTGCCGCCTTTTTTCTCCTGCTACATGAAGCACTTCACTGATTTCCACATCCGTGCCAACATAGTCAGCCAGTATACACTCCGCTAGCGCTACGTGACTGGTTCAGGGCTGCGCCCCGAAACCCGCTAACAACCTCTCTGCTACTGGATATCACCCCATGCCATCTGAATATGATGAACAACGGGGTTCGACTGATACGCAGCTTCCCGGCGAATATGACCTTTTTGATTTAATGGCGAAGGTTACTGAAGAGATCCTGCATGCCCCTGTGGATTCTGGGCCGCCTGTCGGCCGGGAAGCGTTATAGCTTTTTCGCTTGCCCGCGTACGTGGTAATACGCCGGTATTACCTTTTATTTCTTTATTTTCATGTAATTACAGTGGGTTTTTAATACCTGGGTATTACTCGTGAAAACGAAACATTACTTTTTTTTCTTTTAATTCATGCAGTTGCGATGAAAATCGCGGCTGCGTTAGGTGTATGACCATTTTGAGGTTGAAAAATAATCAACCATGGCGGGTGATTTACGCAGGTTAAGGGGAGATCGTGACAAAAAAAAGCGTTCCTCACTGTATCGTTCATGCCTGCATGAACGGGTTATTCTTCCTGACTACAGAATTACATCGCTCCTTCAGTTCATACATCACTTTTACAACACTTTTACAACACTCCTTCGGCCTGTACATCACTTTTACAACACTTTTGCATCACTTTTACATCATTTATACATCACTTTTACATCATTCCTTCAGCTCATACGTCACTTTCATCCTCTGTGCCATTTGTACATCACCCCCTTCCTGAACGTGCTGACAGCGGGTTTTCCGGCTGCGCCGGCAACGCTTCACGGCCACGCAATAAATTGCGTCCCCGTTCACCGTTTTCGGATGGGAAGAACGCCGGAAACAGGACTTCCCCTGGCTGAATGGTGTGAATTTCCGCGCTATGCACTTGCGCGCATACTCATGCATGCCGTAAAAACAGAGCCTGCGCGTTTCTGGCGGGTTTTCGGGTGGTTTGTTGCCTGTTTTACCGGTTTCCCGTCAGAAACGCCCTCAGAGCCTCTCAGGCGGTGCACGCAAGGGATGTTATGTTTAATCGGTCTGACCGTCAGGTACAAAAAAAAGCCCTTAGGGGGCTTTTTTTTTGCTATGAGTTAGCCATATTTTCGTGCGAATTTTTCATCGGAATCGCATAGATAAATAATAAACTCAATAAACGCGATGATCGCGGGTATGAATGTCCAGCAAAAAATTAGATACAGGAACCCCTTAAAAGTAAATCGTCAAACGCATCTCCCGGTGTAAACGCTGAA
AT-rich region
The information of repeat sequences

Motif TACATCACTTTTACA

StartP-valueSite
17551.33e-09ACATCATTTATACATCACTTTTACATCATTCCTTC
17111.33e-09CTTCGGCCTGTACATCACTTTTACAACACTTTTGC
16691.33e-09CTTCAGTTCATACATCACTTTTACAACACTTTTAC
17336.35e-09ACAACACTTTTGCATCACTTTTACATCATTTATAC
16493.69e-08ACTACAGAATTACATCGCTCCTTCAGTTCATACAT

Motif GAATGNGATGAACGCSGG

StartP-valueSite
19151.80e-09CACCGTTTTCGGATGGGAAGAACGCCGGAAACAGGACT
6684.93e-09GTCAGGCGTGGAATGAGATAAACGCGGCCATAACAGCG
22461.94e-08TAAACTCAATAAACGCGATGATCGCGGGTATGAATGTC
7142.04e-08CCGGTAAACCGAAAGGCAGGAATGCGGGGGAGCACGAG
11963.64e-08CATGCCATCTGAATATGATGAACAACGGGGTTCGACTG

Motif CGBGCTGHMAGSBGGTTTBTHGVMTGY

StartP-valueSite
18351.03e-11CCTTCCTGAACGTGCTGACAGCGGGTTTTCCGGCTGCGCCGGCAACG
1801.44e-11TTAAATTTAGCCTGCTGTAAGCTGGTTTGTAGAAAGTCTTTCTCTTG
3603.29e-11ACGAAAAAACCGCCCTGCAAGGCGGTTTTTCGAAGGTTCTCAGAGCA
20319.27e-11GCGTTTCTGGCGGGTTTTCGGGTGGTTTGTTGCCTGTTTTACCGGTT
5933.35e-10GCGCAGCAGTCGGACTGAACGGGGGGTTCGTGCATACAGTCCATCCA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000095 100.0 2344 0 0 1 2344 1 2344 0.0 4329
pORI00000098 99.458 2212 1 1 1 2201 1 2212 0.0 4008
pORI00000098 100.0 44 0 0 2301 2344 2394 2437 3.79e-16 82
pORI00000307 99.914 1158 1 0 1 1158 1 1158 0.0 2134
pORI00000307 97.115 104 3 0 2098 2201 1726 1829 1.68156e-44 176
pORI00000307 100.0 44 0 0 2301 2344 2011 2054 3.79e-16 82
pORI00000116 99.914 1158 1 0 1 1158 1 1158 0.0 2134
pORI00000116 98.204 167 3 0 2098 2264 1726 1892 0.0 292
pORI00000116 100.0 44 0 0 2301 2344 2014 2057 3.79e-16 82
pORI00000094 90.378 1455 105 30 299 1728 1818 374 0.0 1879
pORI00000094 95.704 419 18 0 1711 2129 435 17 0.0 675
pORI00000244 85.134 1231 149 28 302 1519 243 1452 0.0 1229
pORI00000110 90.226 839 71 10 327 1158 2197 3031 0.0 1085
pORI00000093 87.129 909 89 23 299 1186 902 1 0.0 1005
pORI00000061 83.972 861 110 25 305 1155 168 1010 0.0 800
pORI00000086 83.761 819 94 34 354 1158 901 108 0.0 739
pORI00000056 89.502 562 54 5 300 858 1 560 0.0 706
pORI00000314 87.521 593 60 14 927 1511 694 1280 0.0 673
pORI00000314 96.215 317 9 3 1808 2122 1556 1871 0.0 516
pORI00000314 79.198 524 86 18 295 800 21 539 0.0 342
pORI00000075 87.521 593 60 14 927 1511 694 1280 0.0 673
pORI00000075 96.215 317 9 3 1808 2122 1556 1871 0.0 516
pORI00000075 79.198 524 86 18 295 800 21 539 0.0 342
pORI00000043 89.251 521 48 8 344 858 182 700 0.0 645
pORI00000060 79.688 896 123 42 299 1163 2328 1461 0.0 592
pORI00000238 79.599 897 121 45 299 1163 260 1126 0.0 586
pORI00000198 84.483 580 55 30 301 856 96 664 0.0 540
pORI00000069 82.622 633 87 21 539 1163 3363 3980 0.0 538
pORI00000111 82.55 596 72 27 299 872 49 634 0.0 496
pORI00000111 77.083 240 41 14 929 1163 716 946 4.8e-30 128
pORI00000315 82.258 558 70 23 337 872 804 1354 0.0 455
pORI00000315 80.87 230 32 12 939 1163 1447 1669 7.86128e-43 171
pORI00000058 77.946 594 84 38 299 856 10 592 0.0 327
pORI00000058 79.221 231 33 13 939 1163 700 921 1.32e-35 147
pORI00000112 76.797 612 95 40 302 872 974 1579 0.0 305
pORI00000320 76.763 624 89 46 299 877 113 725 0.0 298
pORI00000320 77.922 231 37 12 939 1163 814 1036 3.71e-31 132
pORI00000312 76.763 624 89 46 299 877 113 725 0.0 298
pORI00000312 77.922 231 37 12 939 1163 814 1036 3.71e-31 132
pORI00000224 76.545 631 79 53 299 872 161 779 0.0 281
pORI00000224 100.0 57 0 0 939 995 883 939 2.25e-23 106
pORI00000223 76.545 631 79 53 299 872 161 779 0.0 281
pORI00000223 100.0 57 0 0 939 995 883 939 2.25e-23 106
pORI00000222 76.545 631 79 53 299 872 161 779 0.0 281
pORI00000222 100.0 57 0 0 939 995 883 939 2.25e-23 106
pORI00000097 76.545 631 79 53 299 872 161 779 0.0 281
pORI00000097 100.0 57 0 0 939 995 883 939 2.25e-23 106
pORI00000092 76.545 631 79 53 299 872 161 779 0.0 281
pORI00000092 96.296 54 1 1 939 992 883 935 8.14e-18 88
pORI00000092 100.0 45 0 0 951 995 1007 1051 1.05e-16 84
pORI00000012 76.151 608 101 34 302 872 70 670 0.0 279
pORI00000301 76.387 631 80 53 299 872 161 779 0.0 276
pORI00000301 100.0 57 0 0 939 995 883 939 2.25e-23 106
pORI00000294 76.387 631 80 53 299 872 1150 532 0.0 276
pORI00000294 100.0 57 0 0 939 995 428 372 2.25e-23 106
pORI00000292 76.387 631 80 53 299 872 1150 532 0.0 276
pORI00000292 100.0 57 0 0 939 995 428 372 2.25e-23 106
pORI00000290 76.387 631 80 53 299 872 1141 523 0.0 276
pORI00000290 100.0 57 0 0 939 995 419 363 2.25e-23 106
pORI00000239 76.387 631 80 53 299 872 964 346 0.0 276
pORI00000239 100.0 57 0 0 939 995 242 186 2.25e-23 106
pORI00000309 79.634 383 57 18 509 872 271 651 0.0 255
pORI00000309 78.788 231 35 12 939 1163 743 965 1.71e-34 143
pORI00000022 75.637 628 90 49 299 872 9 627 0.0 254
pORI00000022 78.423 241 38 12 929 1163 710 942 4.76e-35 145
pORI00000308 79.373 383 58 18 509 872 271 651 0.0 250
pORI00000308 98.305 59 1 0 939 997 743 801 8.08e-23 104
pORI00000306 79.221 385 60 17 507 872 910 527 0.0 250
pORI00000334 71.772 914 182 49 300 1166 985 101 0.0 189
pORI00000322 71.772 914 182 49 300 1166 985 101 0.0 189
pORI00001055 86.452 155 15 6 353 503 153 1 3.66005e-41 165
pORI00000343 80.258 233 30 15 938 1163 301 78 4.73e-40 161
pORI00000284 80.628 191 24 7 679 857 392 203 2.87e-32 135
pORI00000234 80.628 191 24 7 679 857 392 203 2.87e-32 135
pORI00000210 80.628 191 24 7 679 857 392 203 2.87e-32 135
pORI00000209 80.628 191 24 7 679 857 392 203 2.87e-32 135
pORI00000240 76.856 229 31 18 940 1164 1105 1315 1.74e-24 110
pORI00000240 91.111 45 1 1 828 872 1015 1056 6.38e-09 58
pORI00001057 96.667 60 2 0 938 997 761 702 1.05e-21 100
pORI00000947 96.667 60 2 0 938 997 783 724 1.05e-21 100
pORI00000921 96.667 60 2 0 938 997 278 337 1.05e-21 100
pORI00000446 96.667 60 2 0 938 997 278 337 1.05e-21 100
pORI00000072 96.667 60 2 0 938 997 589 530 1.05e-21 100
pORI00000031 96.667 60 2 0 938 997 473 532 1.05e-21 100
pORI00001164 96.61 59 2 0 938 996 875 817 3.76e-21 99
pORI00001144 96.61 59 2 0 938 996 250 308 3.76e-21 99
pORI00001062 96.61 59 2 0 938 996 649 591 3.76e-21 99
pORI00001056 96.61 59 2 0 938 996 875 817 3.76e-21 99
pORI00001020 96.61 59 2 0 938 996 250 308 3.76e-21 99
pORI00001011 96.61 59 2 0 938 996 875 817 3.76e-21 99
pORI00000834 96.61 59 2 0 938 996 875 817 3.76e-21 99
pORI00000702 96.552 58 2 0 938 995 761 704 1.35e-20 97