RefSeq NC_016979
DoriC accession number pORI00000086
OriC length 949 nt
OriC AT content 0.4573
The location of oriC region 4850..551 nt
Browse in NCBI
OriC map
OriC sequences
CTTGTTGCGTTTGTCTGCCAGAGTAGCCTCCTGATAACACCGGGACGGGCGGGAAATGTTTCCCGGTCGGCACGGTGTTGGACAAGCCGCAGGCGCGTCAGTCGCTTTTAGCGGGTTTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATACTGGCTTATTATGTTGGCATGAGTGCGGTAATCAGGAAAGTGCTTCATGTGACAGAGGAAAATGCAGCTGCGGGCGTAAGGCAGAAAATGGAAGTTCAGAGGATATGACGCCTCCTCGCTCACTCAGTCGCTGCCGCTCCTGCCGTTCGGCTGCGGCGGGCGTTACCTGCACACGGAGAAGAGCGAAGGCATATGGCATGACAAACGGGGCAGAAAAAGGATGCGCCGCTGCCGTTTTTCCATAGGCTCCGCCCCCTGACAAGCATCACGAAATCTGACGCTCAAATCAGTGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGTGGCTCCCTCGTGCGCTCTCCTGTTCCTGCCTTTCGGTTTACCGGTGTCATTCCGCTGTTATGGCCGCGTTTGTCTCATTCCACGCCTGACACTCAGTTCCGGGTAGGCAGTTCGCTCCAAGCTGGACTGTATGCACGAACCCCCCGTTCAGTCCGACCGCTGCGCCTTCTCCGGTAACTATCATCTTGAGTCCAACCCGGAAAGACACGGTTCATCGCCACTGGCAGCAGCCATTGGTAACGGATTAGAGGAAGTGAGTCTTGAAGTTCTGCGCCAGTTAAGGCTAAACTGAAAGGACAATTTTTGGTGACTGCGCTCCCTCTAAGCCAGTTACCCGGTACATAAGTTGGTAGCTCATGTACCTTCCAAAAACCACCGTTGGTAGCGGTGGTTTTTATTTTTCATAGATTACAGCCTGTAATAAGCCATGGTCAATGGATTACT
CTTGTTGCGTTTGTCTGCCAGAGTAGCCTCCTGATAACACCGGGACGGGCGGGAAATGTTTCCCGGTCGGCACGGTGTTGGACAAGCCGCAGGCGCGTCAGTCGCTTTTAGCGGGTTTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATACTGGCTTATTATGTTGGCATGAGTGCGGTAATCAGGAAAGTGCTTCATGTGACAGAGGAAAATGCAGCTGCGGGCGTAAGGCAGAAAATGGAAGTTCAGAGGATATGACGCCTCCTCGCTCACTCAGTCGCTGCCGCTCCTGCCGTTCGGCTGCGGCGGGCGTTACCTGCACACGGAGAAGAGCGAAGGCATATGGCATGACAAACGGGGCAGAAAAAGGATGCGCCGCTGCCGTTTTTCCATAGGCTCCGCCCCCTGACAAGCATCACGAAATCTGACGCTCAAATCAGTGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGTGGCTCCCTCGTGCGCTCTCCTGTTCCTGCCTTTCGGTTTACCGGTGTCATTCCGCTGTTATGGCCGCGTTTGTCTCATTCCACGCCTGACACTCAGTTCCGGGTAGGCAGTTCGCTCCAAGCTGGACTGTATGCACGAACCCCCCGTTCAGTCCGACCGCTGCGCCTTCTCCGGTAACTATCATCTTGAGTCCAACCCGGAAAGACACGGTTCATCGCCACTGGCAGCAGCCATTGGTAACGGATTAGAGGAAGTGAGTCTTGAAGTTCTGCGCCAGTTAAGGCTAAACTGAAAGGACAATTTTTGGTGACTGCGCTCCCTCTAAGCCAGTTACCCGGTACATAAGTTGGTAGCTCATGTACCTTCCAAAAACCACCGTTGGTAGCGGTGGTTTTTATTTTTCATAGATTACAGCCTGTAATAAGCCATGGTCAATGGATTACT
AT-rich region
The information of repeat sequences

Motif GGCRGAAAATG

StartP-valueSite
2441.77e-07GCGGGCGTAAGGCAGAAAATGGAAGTTCAGA
3738.44e-07TGACAAACGGGGCAGAAAAAGGATGCGCCGC
481.91e-06CACCGGGACGGGCGGGAAATGTTTCCCGGTC
2182.43e-06TTCATGTGACAGAGGAAAATGCAGCTGCGGG

Motif ATKKDTAATGGATTA

StartP-valueSite
9331.69e-08GTAATAAGCCATGGTCAATGGATTACT
9024.39e-08GGTGGTTTTTATTTTTCATAGATTACAGCCTGTAA
7384.39e-08GGCAGCAGCCATTGGTAACGGATTAGAGGAAGTGA
1584.22e-07CGCTAGCGGAGTGTATACTGGCTTATTATGTTGGC

Motif AAHCYGRMADGACAA

StartP-valueSite
7915.00e-09AGTTAAGGCTAAACTGAAAGGACAATTTTTGGTGA
4645.17e-08GTGGTGGCGAAACCCGACAGGACTATAAAGATACC
6991.05e-07TCTTGAGTCCAACCCGGAAAGACACGGTTCATCGC
3544.34e-07AGAGCGAAGGCATATGGCATGACAAACGGGGCAGA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000086 100.0 949 0 0 1 949 1 949 0.0 1753
pORI00000061 86.369 917 95 29 2 901 1120 217 0.0 974
pORI00000069 90.784 727 49 14 1 715 4082 3362 0.0 955
pORI00000110 84.946 930 97 34 1 901 3139 2224 0.0 902
pORI00000244 85.802 817 73 33 108 901 1091 295 0.0 826
pORI00000307 83.981 849 99 32 77 901 1189 354 0.0 780
pORI00000116 83.981 849 99 32 77 901 1189 354 0.0 780
pORI00000060 84.403 795 80 37 81 844 1435 2216 0.0 741
pORI00000238 84.383 794 81 36 81 844 1152 372 0.0 739
pORI00000098 83.741 818 96 32 108 901 1158 354 0.0 739
pORI00000095 83.741 818 96 32 108 901 1158 354 0.0 739
pORI00000043 88.245 587 53 14 273 849 826 246 0.0 688
pORI00000094 85.801 662 69 19 108 749 945 1601 0.0 678
pORI00000093 85.801 662 69 19 108 749 29 685 0.0 678
pORI00000056 91.564 486 30 11 373 851 586 105 0.0 660
pORI00000198 88.793 464 31 17 397 844 664 206 0.0 549
pORI00000111 92.573 377 22 6 378 750 637 263 0.0 536
pORI00000334 79.61 770 117 31 6 752 6 758 0.0 516
pORI00000322 79.61 770 117 31 6 752 6 758 0.0 516
pORI00000315 81.934 548 67 28 377 901 1358 820 0.0 435
pORI00000314 82.222 450 56 20 452 882 539 95 0.0 366
pORI00000314 81.402 328 37 21 108 420 927 609 0.0 246
pORI00000112 79.401 568 77 27 377 907 1583 1019 0.0 366
pORI00000075 82.222 450 56 20 452 882 539 95 0.0 366
pORI00000075 81.402 328 37 21 108 420 927 609 0.0 246
pORI00000320 79.533 557 74 30 388 907 714 161 0.0 361
pORI00000312 79.533 557 74 30 388 907 714 161 0.0 361
pORI00000301 83.375 397 43 19 378 753 782 388 0.0 346
pORI00000294 83.375 397 43 19 378 753 529 923 0.0 346
pORI00000292 83.375 397 43 19 378 753 529 923 0.0 346
pORI00000290 83.375 397 43 19 378 753 520 914 0.0 346
pORI00000239 83.375 397 43 19 378 753 343 737 0.0 346
pORI00000224 83.375 397 43 19 378 753 782 388 0.0 346
pORI00000223 83.375 397 43 19 378 753 782 388 0.0 346
pORI00000222 83.375 397 43 19 378 753 782 388 0.0 346
pORI00000097 83.375 397 43 19 378 753 782 388 0.0 346
pORI00000092 83.375 397 43 19 378 753 782 388 0.0 346
pORI00000058 80.612 490 54 31 388 844 601 120 0.0 340
pORI00000022 82.63 403 47 20 372 753 636 236 0.0 335
pORI00000309 83.511 376 41 18 388 744 644 271 0.0 331
pORI00000308 83.245 376 42 18 388 744 644 271 0.0 326
pORI00000306 82.979 376 45 16 397 753 543 918 0.0 322
pORI00000012 81.726 394 49 15 378 750 673 282 0.0 307
pORI00000284 85.864 191 14 7 396 574 203 392 0.0 191
pORI00000234 85.864 191 14 7 396 574 203 392 0.0 191
pORI00000210 85.864 191 14 7 396 574 203 392 0.0 191
pORI00000209 85.864 191 14 7 396 574 203 392 0.0 191