RefSeq NC_005019
DoriC accession number pORI00000012
OriC length 1064 nt
OriC AT content 0.4596
The location of oriC region 6234..1004 nt
Browse in NCBI
OriC map
OriC sequences
TGGAGATGAGGACATAAAGTGACCACTCTGTACGTTTATCGTGAGAGGGGATATGTAAAAAGATCTCAAGATCCTCTTGAGATCCTTTTTTTTGCGCGCAATCTGCTGTCTGTAGACGAAAAAACCACCCTGGCAGGTGGTTTTTCGAAGGTTAAATAATCCTGGCAGATTATTTAACCGTGGTAACAGGGTGTACAAGACCGCTGCCACCAAATCTGTCCTTTCAGTGTAGCCGCAGTTGGTCCTTCACTTCAAGAACTACGTATCAGCAATTCTTGTACATCCTCTACCAGTGGCTGCTGCCAGTGGCGTTAAGGCGTGACTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCAACCCGAAGGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGGTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCTCCTGCGCGCCCTTTTTTTGGGTGTTTGTCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGCTCGCCGCAGTCGAACGACCGAGCGTAGCGAGTCAGTGAGCGAGGAAGCGGAAGAGCGCCTGGACGTGCATTTTCTCCTTACGCATCTGTGCGGCATTTCACACCCGGCATGGCGTACTTTTCATACAATCCGCACTGATGCCGCATGGTTAAGCCAGTATACACTCCGCTATCGCTACGTGACTGGGTCAGGCTGCGCCCCGACACCCGCTAAAACCTGCTGACGCGCCCTGACGGGCTTGTCTGCTCGCGGAGACGCTTACAGACAAGCTGTGACCGTCTCCGGGAGTTGCATGTG
TGGAGATGAGGACATAAAGTGACCACTCTGTACGTTTATCGTGAGAGGGGATATGTAAAAAGATCTCAAGATCCTCTTGAGATCCTTTTTTTTGCGCGCAATCTGCTGTCTGTAGACGAAAAAACCACCCTGGCAGGTGGTTTTTCGAAGGTTAAATAATCCTGGCAGATTATTTAACCGTGGTAACAGGGTGTACAAGACCGCTGCCACCAAATCTGTCCTTTCAGTGTAGCCGCAGTTGGTCCTTCACTTCAAGAACTACGTATCAGCAATTCTTGTACATCCTCTACCAGTGGCTGCTGCCAGTGGCGTTAAGGCGTGACTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCAACCCGAAGGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGGTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCTCCTGCGCGCCCTTTTTTTGGGTGTTTGTCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGCTCGCCGCAGTCGAACGACCGAGCGTAGCGAGTCAGTGAGCGAGGAAGCGGAAGAGCGCCTGGACGTGCATTTTCTCCTTACGCATCTGTGCGGCATTTCACACCCGGCATGGCGTACTTTTCATACAATCCGCACTGATGCCGCATGGTTAAGCCAGTATACACTCCGCTATCGCTACGTGACTGGGTCAGGCTGCGCCCCGACACCCGCTAAAACCTGCTGACGCGCCCTGACGGGCTTGTCTGCTCGCGGAGACGCTTACAGACAAGCTGTGACCGTCTCCGGGAGTTGCATGTG
AT-rich region
The information of repeat sequences

Motif KAHGDAWAAACAAYYCTDGCASVTCNTTT

StartP-valueSite
1158.86e-12GCTGTCTGTAGACGAAAAAACCACCCTGGCAGGTGGTTTTTCGAAGGTT
2601.67e-11CTTCAAGAACTACGTATCAGCAATTCTTGTACATCCTCTACCAGTGGCT
6433.98e-11GGGCGGAGCCTATGGAAAAACGCCTCCTGCGCGCCCTTTTTTTGGGTGT
1475.69e-11GTGGTTTTTCGAAGGTTAAATAATCCTGGCAGATTATTTAACCGTGGTA
527.20e-10TGAGAGGGGATATGTAAAAAGATCTCAAGATCCTCTTGAGATCCTTTTT

Motif ASTTABCGGRTAAGCSGCA

StartP-valueSite
3482.74e-10TCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGC
4955.29e-09AAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAAC
3221.10e-07TTAAGGCGTGACTTACCGGGTTGGACTCAAGACGATAGT
8831.60e-07GGCATGGCGTACTTTTCATACAATCCGCACTGATGCCGC
8011.70e-07GTAGCGAGTCAGTGAGCGAGGAAGCGGAAGAGCGCCTGG

Motif GAGAAA

StartP-valueSite
4821.91e-04ACCCGAAGGGGAGAAAGGCGGACAGG
4561.91e-04CGTGAGCTATGAGAAAGCGCCACGCA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000012 100.0 1064 0 0 1 1064 1 1064 0.0 1965
pORI00000309 90.42 1023 75 21 54 1064 35 1046 0.0 1325
pORI00000306 88.932 1039 77 32 55 1064 1160 131 0.0 1247
pORI00000022 89.254 1005 78 22 70 1051 12 1009 0.0 1230
pORI00000058 88.594 1017 91 21 58 1064 1 1002 0.0 1212
pORI00000320 88.648 1013 89 22 55 1051 101 1103 0.0 1210
pORI00000312 88.648 1013 89 22 55 1051 101 1103 0.0 1210
pORI00000343 88.31 1018 92 23 55 1055 1013 6 0.0 1195
pORI00000308 90.089 898 67 20 54 941 35 920 0.0 1146
pORI00000112 88.118 951 88 21 62 997 967 1907 0.0 1116
pORI00000315 91.805 781 55 9 288 1063 973 1749 0.0 1079
pORI00000239 86.952 912 69 37 55 928 977 78 0.0 979
pORI00000294 87.717 806 58 28 55 826 1163 365 0.0 902
pORI00000292 87.717 806 58 28 55 826 1163 365 0.0 902
pORI00000290 87.717 806 58 28 55 826 1154 356 0.0 902
pORI00000301 87.593 806 59 29 55 826 148 946 0.0 896
pORI00000224 87.469 806 60 29 55 826 148 946 0.0 891
pORI00000223 87.469 806 60 29 55 826 148 946 0.0 891
pORI00000223 92.157 102 7 1 964 1064 1488 1589 7.7e-35 143
pORI00000222 87.469 806 60 29 55 826 148 946 0.0 891
pORI00000097 87.469 806 60 29 55 826 148 946 0.0 891
pORI00000097 92.157 102 7 1 964 1064 2008 2109 7.7e-35 143
pORI00000092 86.973 806 61 32 55 826 148 943 0.0 867
pORI00000092 92.157 102 7 1 964 1064 1872 1973 7.7e-35 143
pORI00000092 96.154 52 2 0 775 826 1007 1058 1.32e-17 86
pORI00000111 83.298 946 115 34 116 1051 101 1013 0.0 833
pORI00000094 76.477 931 150 49 70 985 1815 939 0.0 442
pORI00000093 76.477 931 150 49 70 985 899 23 0.0 442
pORI00000240 88.761 347 25 11 717 1061 1058 1392 0.0 412
pORI00000240 86.441 59 5 2 613 671 1002 1057 2.22e-10 62
pORI00000008 79.891 552 90 17 58 591 1651 1103 0.0 385
pORI00000198 78.929 560 75 34 109 656 138 666 0.0 340
pORI00000060 77.597 616 96 30 70 673 2325 1740 0.0 335
pORI00000060 92.0 150 10 2 916 1063 1530 1381 0.0 209
pORI00000244 77.627 590 92 27 70 654 243 797 0.0 322
pORI00000061 77.647 595 87 32 69 654 163 720 0.0 320
pORI00000314 82.353 374 57 9 68 435 25 395 0.0 316
pORI00000075 82.353 374 57 9 68 435 25 395 0.0 316
pORI00000043 82.383 386 46 14 288 671 350 715 0.0 316
pORI00000056 77.25 589 97 23 70 654 3 558 0.0 311
pORI00000086 81.841 391 48 15 288 676 744 375 0.0 307
pORI00000110 77.837 564 78 32 116 670 2220 2745 0.0 305
pORI00000307 76.19 609 99 36 70 670 302 872 0.0 279
pORI00000116 76.19 609 99 36 70 670 302 872 0.0 279
pORI00000098 76.19 609 99 36 70 670 302 872 0.0 279
pORI00000095 76.19 609 99 36 70 670 302 872 0.0 279
pORI00000069 75.685 584 91 38 116 673 3141 3699 0.0 244
pORI00000238 92.0 150 10 2 916 1063 1057 1206 0.0 209
pORI00000334 85.135 148 16 4 116 260 935 791 5.95e-36 147
pORI00000322 85.034 147 18 2 116 260 935 791 5.95e-36 147
pORI00000284 84.354 147 11 5 519 654 349 204 4.64e-32 134
pORI00000234 84.354 147 11 5 519 654 349 204 4.64e-32 134
pORI00000210 84.354 147 11 5 519 654 349 204 4.64e-32 134
pORI00000209 84.354 147 11 5 519 654 349 204 4.64e-32 134
pORI00000914 98.214 56 1 0 764 819 654 709 1.69e-21 99
pORI00000595 98.214 56 1 0 764 819 654 709 1.69e-21 99
pORI00000478 98.214 56 1 0 764 819 298 353 1.69e-21 99
pORI00000181 96.667 60 1 1 917 975 784 725 1.69e-21 99
pORI00000990 89.474 76 8 0 748 823 603 678 6.08e-21 97
pORI00000124 93.548 62 1 2 917 975 783 844 1.02e-18 90
pORI00000011 93.333 60 2 2 917 975 784 842 3.66e-18 88