RefSeq NC_015570
DoriC accession number pORI00000312
OriC length 1112 nt
OriC AT content 0.4586
The location of oriC region 7101..1080 nt
Browse in NCBI
OriC map
OriC sequences
CTCAGCAAAAGTTCGATTTATTCAACAAAGCCGTTGCTAATCATTAGTTTTTGTCTTGTGGTTGAAAACTGAGCGCTATGGCTATGACCTAGGAGTGGGAGTGAAAAGATTCAAGGATCCTCTTGTGATCCTTTTTTTCTGCGCGTAATCTGCTGCCTGTAAACAAAAAAACCACCGCTACCAACGGTGGTTTGTTTGCCGGAATCTAGAGCTACCAACTCTTTCTTCCGAAGGTAACTGGCTTGGTGGAGCACAGATACCAAATACTGTCCTTCTAGTGTAGCCGCAGTTAGGCCACCACTTCAAGAACTCTTAATATCTCAATCCACCTTGTCCAGTTACCAGTGGCTGCTGCCAGTGGCGCTTTGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCAACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCATCGGCGTGGCCTTTCTCCCGGCCTTTGCCTTTTGCGCACATGTTCTTTCCGGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGCTCGCCGCAGCCGAACGACCGAGCGTAGCGAGTCAGTGAGCGAGGAAGCGGAAGAGCGTCGGAAGCTGCATTTTCTCCTTACGCATCTGTGCGGCATTTCACACCCGGCATGGCGCACTTTTCATACAATCTGCACTGATGCCGCATGGTTAAGCCAGTATACACTCCGCTATCGCTACGTGACTGGGTCATGGCTGCGCCCCGACACCCGCTAAAACCCCCTGACGCGCCCTGACGGGCTTGTCTGCTGACGAAAACGCCCACGGGAAAGCCGTGACCGCCTCCGTCAGCTTCG
CTCAGCAAAAGTTCGATTTATTCAACAAAGCCGTTGCTAATCATTAGTTTTTGTCTTGTGGTTGAAAACTGAGCGCTATGGCTATGACCTAGGAGTGGGAGTGAAAAGATTCAAGGATCCTCTTGTGATCCTTTTTTTCTGCGCGTAATCTGCTGCCTGTAAACAAAAAAACCACCGCTACCAACGGTGGTTTGTTTGCCGGAATCTAGAGCTACCAACTCTTTCTTCCGAAGGTAACTGGCTTGGTGGAGCACAGATACCAAATACTGTCCTTCTAGTGTAGCCGCAGTTAGGCCACCACTTCAAGAACTCTTAATATCTCAATCCACCTTGTCCAGTTACCAGTGGCTGCTGCCAGTGGCGCTTTGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCAACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCATCGGCGTGGCCTTTCTCCCGGCCTTTGCCTTTTGCGCACATGTTCTTTCCGGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGCTCGCCGCAGCCGAACGACCGAGCGTAGCGAGTCAGTGAGCGAGGAAGCGGAAGAGCGTCGGAAGCTGCATTTTCTCCTTACGCATCTGTGCGGCATTTCACACCCGGCATGGCGCACTTTTCATACAATCTGCACTGATGCCGCATGGTTAAGCCAGTATACACTCCGCTATCGCTACGTGACTGGGTCATGGCTGCGCCCCGACACCCGCTAAAACCCCCTGACGCGCCCTGACGGGCTTGTCTGCTGACGAAAACGCCCACGGGAAAGCCGTGACCGCCTCCGTCAGCTTCG
AT-rich region
The information of repeat sequences

Motif TTTTTSTGMDSBKADNCNGCTBGSYGNAGCCNADADAMMVACCGCW

StartP-valueSite
1341.28e-17TGTGATCCTTTTTTTCTGCGCGTAATCTGCTGCCTGTAAACAAAAAAACCACCGCTACCAACGGTG
2234.98e-15TACCAACTCTTTCTTCCGAAGGTAACTGGCTTGGTGGAGCACAGATACCAAATACTGTCCTTCTAG
7991.10e-14TATTACCGCCTTTGAGTGAGCTGATACCGCTCGCCGCAGCCGAACGACCGAGCGTAGCGAGTCAGT
9432.27e-14CACTTTTCATACAATCTGCACTGATGCCGCATGGTTAAGCCAGTATACACTCCGCTATCGCTACGT
6633.19e-14TGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCATCGGCGTGGC

Motif TGAAAA

StartP-valueSite
1021.53e-04GGAGTGGGAGTGAAAAGATTCAAGGA
631.53e-04GTCTTGTGGTTGAAAACTGAGCGCTA

Motif AGHTACCA

StartP-valueSite
3371.21e-05CACCTTGTCCAGTTACCAGTGGCTGCTG
2102.59e-05CGGAATCTAGAGCTACCAACTCTTTCTT
4863.71e-05CACCGAACTGAGATACCAACAGCGTGAG
5927.96e-05CGCACGAGGGAGCTTCCAGGGGGAAACG
4007.96e-05TCAAGACGATAGTTACCGGATAAGGCGC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000320 100.0 1112 0 0 1 1112 1 1112 0.0 2054
pORI00000312 100.0 1112 0 0 1 1112 1 1112 0.0 2054
pORI00000112 95.127 944 41 5 108 1049 967 1907 0.0 1493
pORI00000306 91.148 1028 69 16 100 1109 1161 138 0.0 1375
pORI00000022 91.15 1017 66 18 113 1112 9 1018 0.0 1358
pORI00000343 89.128 1021 96 14 100 1112 1014 1 0.0 1256
pORI00000239 91.916 903 41 21 103 979 974 78 0.0 1234
pORI00000058 88.867 1006 89 19 104 1103 1 989 0.0 1216
pORI00000012 88.648 1013 89 22 101 1103 55 1051 0.0 1210
pORI00000309 93.235 813 42 11 259 1066 191 995 0.0 1184
pORI00000301 92.965 796 31 15 103 875 151 944 0.0 1136
pORI00000294 92.839 796 32 15 103 875 1160 367 0.0 1131
pORI00000292 92.839 796 32 15 103 875 1160 367 0.0 1131
pORI00000290 92.839 796 32 15 103 875 1151 358 0.0 1131
pORI00000224 92.839 796 32 15 103 875 151 944 0.0 1131
pORI00000223 92.839 796 32 15 103 875 151 944 0.0 1131
pORI00000223 94.118 51 3 0 1016 1066 1488 1538 2.3e-15 79
pORI00000222 92.839 796 32 15 103 875 151 944 0.0 1131
pORI00000097 92.839 796 32 15 103 875 151 944 0.0 1131
pORI00000097 94.118 51 3 0 1016 1066 2008 2058 2.3e-15 79
pORI00000315 88.316 950 82 24 159 1103 812 1737 0.0 1112
pORI00000092 92.337 796 33 18 103 875 151 941 0.0 1107
pORI00000092 98.0 50 1 0 826 875 1007 1056 3.83e-18 88
pORI00000092 94.118 51 3 0 1016 1066 1872 1922 2.3e-15 79
pORI00000308 92.016 739 45 12 259 992 191 920 0.0 1026
pORI00000111 86.667 885 85 28 233 1112 166 1022 0.0 952
pORI00000094 78.157 792 105 48 258 1036 1676 940 0.0 442
pORI00000093 78.157 792 105 48 258 1036 760 24 0.0 442
pORI00000008 80.536 560 77 26 104 642 1651 1103 0.0 401
pORI00000198 82.645 484 50 27 232 707 209 666 0.0 398
pORI00000244 78.768 617 84 37 116 726 243 818 0.0 370
pORI00000061 78.871 620 78 41 121 731 170 745 0.0 370
pORI00000086 79.673 551 72 30 167 714 901 388 0.0 361
pORI00000043 84.946 372 35 15 336 705 346 698 0.0 357
pORI00000110 80.894 492 58 30 233 721 2287 2745 0.0 355
pORI00000110 79.498 239 40 8 814 1047 2812 3046 2.21999e-40 161
pORI00000060 78.548 606 81 39 113 705 2328 1759 0.0 353
pORI00000060 88.889 144 15 1 967 1109 1530 1387 8.40779e-45 176
pORI00000240 85.014 347 37 12 758 1103 1050 1382 0.0 339
pORI00000240 88.333 60 4 1 664 723 1002 1058 1.39e-12 69
pORI00000056 83.288 371 43 13 336 705 206 558 0.0 324
pORI00000307 76.726 623 91 44 113 725 299 877 0.0 298
pORI00000307 77.344 256 42 15 814 1062 939 1185 3.75e-33 137
pORI00000116 76.726 623 91 44 113 725 299 877 0.0 298
pORI00000116 77.344 256 42 15 814 1062 939 1185 3.75e-33 137
pORI00000098 76.726 623 91 44 113 725 299 877 0.0 298
pORI00000098 77.922 231 37 13 814 1036 939 1163 1.74e-31 132
pORI00000095 76.726 623 91 44 113 725 299 877 0.0 298
pORI00000095 77.922 231 37 13 814 1036 939 1163 1.74e-31 132
pORI00000069 77.465 497 71 26 259 734 3232 3708 0.0 259
pORI00000238 89.855 138 13 1 967 1103 1057 1194 8.40779e-45 176
pORI00000284 85.034 147 10 5 570 705 349 204 1.04e-33 139
pORI00000234 85.034 147 10 5 570 705 349 204 1.04e-33 139
pORI00000210 85.034 147 10 5 570 705 349 204 1.04e-33 139
pORI00000209 85.034 147 10 5 570 705 349 204 1.04e-33 139
pORI00001062 95.455 66 3 0 814 879 648 583 1.06e-23 106
pORI00001057 96.721 61 2 0 814 874 760 700 1.37e-22 102
pORI00000947 96.721 61 2 0 814 874 782 722 1.37e-22 102
pORI00000921 90.789 76 7 0 799 874 264 339 1.37e-22 102
pORI00000702 96.721 61 2 0 814 874 760 700 1.37e-22 102
pORI00000446 90.789 76 7 0 799 874 264 339 1.37e-22 102
pORI00000072 96.721 61 2 0 814 874 588 528 1.37e-22 102
pORI00000031 90.789 76 7 0 799 874 459 534 1.37e-22 102
pORI00001164 93.939 66 4 0 814 879 874 809 4.92e-22 100
pORI00001144 91.667 72 6 0 799 870 236 307 4.92e-22 100
pORI00001056 93.939 66 4 0 814 879 874 809 4.92e-22 100
pORI00001020 91.667 72 6 0 799 870 236 307 4.92e-22 100
pORI00001011 93.939 66 4 0 814 879 874 809 4.92e-22 100
pORI00000834 93.939 66 4 0 814 879 874 809 4.92e-22 100
pORI00000181 96.667 60 2 0 968 1027 784 725 4.92e-22 100
pORI00000124 93.548 62 2 1 968 1027 783 844 2.96e-19 92
pORI00000011 93.333 60 3 1 968 1027 784 842 3.83e-18 88