RefSeq NZ_CP027592
DoriC accession number pORI00001144
OriC length 1125 nt
OriC AT content 0.5982
The location of oriC region 7165..8289 nt
Browse in NCBI
OriC map
OriC sequences
TCTGTTGTCATGATCCGGATAGTAGTTCAAGCTCGATCAAAATTTCCTCAAGGGAACGACTGTTTTGTGAATACCCTCTAAAACGTGCTGTATCGCATTCTGAGTGATTTTTTCGATCTCGCATGGTTTTCCTCATGGTCTTATCGAACGAAGCGGCAGAAAGCGATTCAGGGCTTCTCAGTGAAAGATCCAAAAAGGATCAATCAACGGATCGTATGATCTGACTTCTTTAGATTTTGAGAAAGGAGACACCGCTCGCCGCAGCCGAACGACCGAGCGTAGCGAGTTAGTGAGCGAGGAAGCGGAATTGCGGCGGGTTAACATCAGGCACTTACGCGCAGTGGTTGAAAAATAAGCACATCGTTTTCAAGTGCTGCTGTTCTGGTTCAAAGTGATCTGTCCTCTGCTAACAAAACGAGTTATCCACAGAAATTGTGAATGCGTAATTTTCGGCTGAGTTATCCACAGATTTTTTGTGATTTTTTGCTTCTAACACTTATTAAACTTTAGATCTTAAATGTAGATCTTTAGATCTACTTTAAGATCTTAGAAACTTAAAATACTTTTGCAAAATTAATGCCAATGTTTTTTATCTTTTATTTTCAGTAAATTATGCGTAATTTTTCACATGATGCTCACGTGAAAGGTGGATGGCTATGCCGTGAAAGGTGGATGGCTATGCCGCGAAAGGTGGATGGCTATGCCGCGAAAGGTGGATGACTATGCCGCGAAAGGTGGATGGCTATGCCGTGAAAGGTGGATGACTATGCCGTCAGGTGTTGCCGTCATATCGATCTCATAATGAGATCAAACTGTTGTCATGGTTACATGCTACGTAACTATTTGAAAAATAACCATACGCCTATTTTTTGTGCGCTTGGCGCTTTTTTTATCGAAAGGTGGATGGGTATGCCGTTTGAATTGAGTTTTCTGAATTGTGAAAGGTGGACGGCTGTGCCGTTGTTTTGATCTGTATAATATATTGATAATTAAGGTGATTATATTCTGCTAAGAGCAGATATATATCTTGTTTAAAGGTGGAATCATAAAGGTGGATAAATCCACTTTACATAATCCACCTTTTAGAATACTCTGTGTATGAATGGTTGTTCTAAGGAATAAACA
TCTGTTGTCATGATCCGGATAGTAGTTCAAGCTCGATCAAAATTTCCTCAAGGGAACGACTGTTTTGTGAATACCCTCTAAAACGTGCTGTATCGCATTCTGAGTGATTTTTTCGATCTCGCATGGTTTTCCTCATGGTCTTATCGAACGAAGCGGCAGAAAGCGATTCAGGGCTTCTCAGTGAAAGATCCAAAAAGGATCAATCAACGGATCGTATGATCTGACTTCTTTAGATTTTGAGAAAGGAGACACCGCTCGCCGCAGCCGAACGACCGAGCGTAGCGAGTTAGTGAGCGAGGAAGCGGAATTGCGGCGGGTTAACATCAGGCACTTACGCGCAGTGGTTGAAAAATAAGCACATCGTTTTCAAGTGCTGCTGTTCTGGTTCAAAGTGATCTGTCCTCTGCTAACAAAACGAGTTATCCACAGAAATTGTGAATGCGTAATTTTCGGCTGAGTTATCCACAGATTTTTTGTGATTTTTTGCTTCTAACACTTATTAAACTTTAGATCTTAAATGTAGATCTTTAGATCTACTTTAAGATCTTAGAAACTTAAAATACTTTTGCAAAATTAATGCCAATGTTTTTTATCTTTTATTTTCAGTAAATTATGCGTAATTTTTCACATGATGCTCACGTGAAAGGTGGATGGCTATGCCGTGAAAGGTGGATGGCTATGCCGCGAAAGGTGGATGGCTATGCCGCGAAAGGTGGATGACTATGCCGCGAAAGGTGGATGGCTATGCCGTGAAAGGTGGATGACTATGCCGTCAGGTGTTGCCGTCATATCGATCTCATAATGAGATCAAACTGTTGTCATGGTTACATGCTACGTAACTATTTGAAAAATAACCATACGCCTATTTTTTGTGCGCTTGGCGCTTTTTTTATCGAAAGGTGGATGGGTATGCCGTTTGAATTGAGTTTTCTGAATTGTGAAAGGTGGACGGCTGTGCCGTTGTTTTGATCTGTATAATATATTGATAATTAAGGTGATTATATTCTGCTAAGAGCAGATATATATCTTGTTTAAAGGTGGAATCATAAAGGTGGATAAATCCACTTTACATAATCCACCTTTTAGAATACTCTGTGTATGAATGGTTGTTCTAAGGAATAAACA

AT-rich region
The information of repeat sequences

Motif GAAAGGTGGATGGCTATGCCG

StartP-valueSite
7301.65e-13ACTATGCCGCGAAAGGTGGATGGCTATGCCGTGAAAGGTGG
6861.65e-13GCTATGCCGCGAAAGGTGGATGGCTATGCCGCGAAAGGTGG
6641.65e-13GCTATGCCGTGAAAGGTGGATGGCTATGCCGCGAAAGGTGG
6421.65e-13ATGCTCACGTGAAAGGTGGATGGCTATGCCGTGAAAGGTGG
7523.61e-13GCTATGCCGTGAAAGGTGGATGACTATGCCGTCAGGTGTTG

Motif GAAAGGTGGAHGVSTDTGCCG

StartP-valueSite
8954.76e-13TTTTTTTATCGAAAGGTGGATGGGTATGCCGTTTGAATTGA
9401.50e-12TCTGAATTGTGAAAGGTGGACGGCTGTGCCGTTGTTTTGAT
7083.25e-12GCTATGCCGCGAAAGGTGGATGACTATGCCGCGAAAGGTGG
2412.17e-10TAGATTTTGAGAAAGGAGACACCGCTCGCCGCAGCCGAACG

Motif ATCCAC

StartP-valueSite
10741.21e-04ACTTTACATAATCCACCTTTTAGAAT
10601.21e-04AGGTGGATAAATCCACTTTACATAAT
4611.21e-04CGGCTGAGTTATCCACAGATTTTTTG
4221.21e-04AAAACGAGTTATCCACAGAAATTGTG

The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00001144 100.0 1125 0 0 1 1125 1 1125 0.0 2078
pORI00001144 95.556 90 4 0 683 772 639 728 2.27e-35 145
pORI00001144 95.556 90 4 0 639 728 683 772 2.27e-35 145
pORI00001144 95.652 46 2 0 727 772 639 684 3.02e-14 75
pORI00001144 95.652 46 2 0 639 684 727 772 3.02e-14 75
pORI00001056 99.911 1125 0 1 1 1125 1124 1 0.0 2071
pORI00001056 96.552 87 3 0 642 728 439 353 2.27e-35 145
pORI00001056 96.552 87 3 0 686 772 483 397 2.27e-35 145
pORI00001056 97.674 43 1 0 642 684 395 353 3.02e-14 75
pORI00001056 97.674 43 1 0 730 772 483 441 3.02e-14 75
pORI00001020 99.911 1125 0 1 1 1125 1 1124 0.0 2071
pORI00001020 95.556 90 4 0 683 772 639 728 2.27e-35 145
pORI00001020 95.556 90 4 0 639 728 683 772 2.27e-35 145
pORI00001020 95.652 46 2 0 727 772 639 684 3.02e-14 75
pORI00001020 95.652 46 2 0 639 684 727 772 3.02e-14 75
pORI00001011 99.911 1125 0 1 1 1125 1124 1 0.0 2071
pORI00001011 96.552 87 3 0 642 728 439 353 2.27e-35 145
pORI00001011 96.552 87 3 0 686 772 483 397 2.27e-35 145
pORI00001011 97.674 43 1 0 642 684 395 353 3.02e-14 75
pORI00001011 97.674 43 1 0 730 772 483 441 3.02e-14 75
pORI00001164 98.489 1125 16 1 1 1125 1124 1 0.0 1982
pORI00001164 96.552 87 3 0 642 728 439 353 2.27e-35 145
pORI00001164 95.402 87 4 0 686 772 483 397 1.05e-33 139
pORI00001164 97.674 43 1 0 642 684 395 353 3.02e-14 75
pORI00001164 95.349 43 2 0 730 772 483 441 1.4e-12 69
pORI00000834 98.489 1125 16 1 1 1125 1124 1 0.0 1982
pORI00000834 96.552 87 3 0 642 728 439 353 2.27e-35 145
pORI00000834 95.402 87 4 0 686 772 483 397 1.05e-33 139
pORI00000834 97.674 43 1 0 642 684 395 353 3.02e-14 75
pORI00000834 95.349 43 2 0 730 772 483 441 1.4e-12 69
pORI00001057 83.382 692 94 16 1 682 1011 331 0.0 621
pORI00000921 83.552 687 90 17 1 676 28 702 0.0 621
pORI00000947 81.552 786 111 20 1 763 1035 261 0.0 617
pORI00000446 85.406 603 72 13 1 594 28 623 0.0 612
pORI00000421 85.284 598 80 7 1 594 225 818 0.0 610
pORI00000702 83.092 692 94 18 1 682 1009 331 0.0 608
pORI00000031 83.016 683 95 16 1 674 225 895 0.0 599
pORI00000072 90.099 404 39 1 1 404 837 435 0.0 523
pORI00001062 89.604 404 41 1 1 404 897 495 0.0 512
pORI00000990 88.366 404 47 0 1 404 368 771 0.0 486
pORI00000343 93.151 73 5 0 235 307 316 244 2.97e-24 108
pORI00000308 95.455 66 3 0 251 316 743 808 1.07e-23 106
pORI00000914 92.958 71 3 1 238 308 642 710 1.38e-22 102
pORI00000595 92.958 71 3 1 238 308 642 710 1.38e-22 102
pORI00000478 92.958 71 3 1 238 308 286 354 1.38e-22 102
pORI00000094 98.276 58 1 0 251 308 1164 1107 1.38e-22 102
pORI00000093 98.276 58 1 0 251 308 248 191 1.38e-22 102
pORI00000320 91.667 72 6 0 236 307 799 870 4.98e-22 100
pORI00000315 91.667 72 6 0 236 307 1432 1503 4.98e-22 100
pORI00000312 91.667 72 6 0 236 307 799 870 4.98e-22 100
pORI00000309 91.667 72 6 0 236 307 728 799 4.98e-22 100
pORI00000111 95.238 63 3 0 244 306 719 781 4.98e-22 100
pORI00000307 96.61 59 2 0 250 308 938 996 1.79e-21 99
pORI00000116 96.61 59 2 0 250 308 938 996 1.79e-21 99
pORI00000110 96.61 59 2 0 250 308 2811 2869 1.79e-21 99
pORI00000098 96.61 59 2 0 250 308 938 996 1.79e-21 99
pORI00000095 96.61 59 2 0 250 308 938 996 1.79e-21 99
pORI00000301 90.278 72 7 0 236 307 868 939 2.32e-20 95
pORI00000294 96.491 57 2 0 251 307 428 372 2.32e-20 95
pORI00000292 96.491 57 2 0 251 307 428 372 2.32e-20 95
pORI00000290 96.491 57 2 0 251 307 419 363 2.32e-20 95
pORI00000239 96.491 57 2 0 251 307 242 186 2.32e-20 95
pORI00000224 90.278 72 7 0 236 307 868 939 2.32e-20 95
pORI00000223 90.278 72 7 0 236 307 868 939 2.32e-20 95
pORI00000222 90.278 72 7 0 236 307 868 939 2.32e-20 95
pORI00000097 90.278 72 7 0 236 307 868 939 2.32e-20 95
pORI00000058 90.278 72 7 0 236 307 685 756 2.32e-20 95
pORI00000240 92.424 66 3 2 235 300 1088 1151 8.33e-20 94
pORI00000092 86.957 69 8 1 236 304 868 935 8.39e-15 77