RefSeq NC_019080
DoriC accession number pORI00000094
OriC length 2996 nt
OriC AT content 0.5307
The location of oriC region 1412..4407 nt
Browse in NCBI
OriC map
OriC sequences
CAGTGCAGGTGACTCTGATTTACCATAACATCTGTTATCAGCACCGCCTGAGAGGCCCTCAGGGCGTTTCTGACGGGAAACCGGTAAAACAGGCAACAAACCACCCGAAAACCCGCCAGAAACGCGCAGGCTCTGTTTTTACGGCATGCATGAGTATGCGCACAAGTGCATAGCGCGGAAATTCACACCATTCAGCCGGGGTAAGTCCTGTTTCCGGCGTTCTTCCCATCCGAAAACGGTGAACGGGGACGCAATTTATTGCGTGGCCGTGAAGCGTTGCCGGCGCAGCCGGAAAACCCGCTGTCAGCACGTTCAGGAAGGGGGTGATGTACAAATGGCACAGAGGATGAAAGTGACGTATGAGCTGAAGGAATGATGTAAAAGTGATGTAAAAGTGATGTATAAGTGATGTAAAAGTGATGTAAAAGTGATGTATGAACTGAAGGAGCGATGTAATTCTGTAGTCAGGAAGAATAACCCGTTCATGCAGGCATGAACGATACAGTGAGGAACGCTTTTTTTGTCACGATCTCCCCTTAACCTGCGTAAATCACCCGCCATGGTTGATTATTTTTCAACCTCAAAATGGTCATACACCTAACGCAGCCGCGATTTTCATCGCAACTGCATGAATTAAAAGAAAAAAAAGGAATATTTCGTTTTCACGAGTAATACCCGGGTATTAAAAATCCACTGTAATTACATGAAAATAAAGAAATAAAAGGTAATACCGGAGTATTACCACGTACGCGGGCAAGCGAAAAAGCTATAACGCTTCCCGGCCGACAGGCGACCCAAAATCCACAGGGGCATGCAGGTTCTCTTCAGTAACCTGCGCCATTAAATCAAAAAGGTCATATTCGCCGGGAAGCTGCGTATCAGTCGAATCCAGTTGTTCATCATATTCAGATGGCATGGGGTGATATCCAGTAGCTGAGAGGTTGTTAGCGGGTTTCGGGGCGCAGCCCTGAACCAGTCATGTAGCGCTAGCGGAGTGTATACTGGCTTACTATGTTGCCACGATTGCGAAAATCAGTGAAGTGCTTCATGTGGCAGGAGAAAAAAGGCAGCACCGGCGCGTCAGCAGAATATGCGATACAGGAGATATTCCGCTTCCTCGCTCACTGACTCGCTACGCTCGGTCGTTCGGCTGCGGCGAGCGGTACCGGCTTACGGACGGGGACGGAAATTTCCTGGAAGATACCAGGAAGACACTTAGCAAAGAAGAGATAAGGCCACGGCGAAGCCGTTTTTCCATAGGCTCCGCCCCCCTGACAAGCATCGCAAAATCTGACGCTCAAATCAGTGGTGGCGAAACCCGACAGGACTATAAAGATCCCAGGCGTTTCCCCCTGGTAGCTCCCTCGTGCGCTCTCCTGTTCCTGCCTTTCGGTTTACCGGTGTCATTCCGCTGTTATGGCCGCGGTTTCTCATTCCACGCCTGACACTCAGTTCCGTGAAGGCAGTTCGCTCCAAGCTGGACTGTATGCACGAACCCCCCGTTCAGTCCGACCGCTGCGCCTTGTCCGGTAACTATCAACTTGAGTCCAACCCGGAAAGACACGACAAAACGCCACTGGCAGCAGCCATTAGTAACAGGAGTGCACGAGAAGATAGATTAAGAGGTCTTGAAGTAGAGGCCTGACTGCGGCTACACTGAAAGAACAGTTTTGGTAATGGCGGTCTCGTGAACCCTGTTACCGGGTTAAGCAGTTCCCCAACTGACTTAACCTTCGAACAAACCGCCTCCCCAGGCGGTTTTTTCGTTTACAGAGCAAGAGATTACGATTCATTGAAAAGGATCTCAAGAAGATCCTTTGTAGATTACTATCAATTAATCTTCCGAACATGACACCAGTCACTGTTGATTACGGTTAAACCGCTCCGTAACAGGTTTCCCTCGTATTGGTGACTTGCAGCACCAAAGAAGCAAAAAAGATAAATATAGCCTAGTCCGTAGGCAGGACTTTTCAAGTCTCGGAAGGTTTCTTCAATCTGCATTCGCTTCGAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAGTTGCTAGAACCCATGGCTCCTTTGCCGACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTAGAGCGAGATTTATACAATAGAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAGATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCTTACTCGACTTAACCAGTACCAACCCAGCTTCTCAACGGATTTATACCATGGCACTTTAAAGCCAGCATCACTGACAATGAGCGGTGTGGTGTTACTCGGTAGAATGCTCGCAAGGTCGGCTAGAAATTGGTCATGAGCTTTCTTTGAACATTGCTCTGAAAGCGGGAACGCTTTCTCATAAAGAGTAACAGAACGACCGTGTAGTGCGACTGAAGCTCGCAATACCATAAGTCGTTTTTGCTCACGAATATCAGACCAGTCAACAAGTACAATGGGCATCGTATTGCCCGAACAGATAAAGCTAGCATGCCAACGGTATACAGCGAGTCGCTCTTTGTGGAGGTGACGATTACCTAACAATCGGTCGATTCGTTTGATGTTATGTTTTGTTCTCGCTTTGGTTGGCAGGTTACGGCCAAGTTCGGTAAGAGTGAGAGTTTTACAGTCAAGTAATGCGTGGCAAGCCAACGTTAAGCTGTTGAGTCGTTTTAAGTGTAATTCGGGGCAGAATTGGTAAAGAGAGTCGTGTAAAATATCGAGTTCGCACATCTTGTTGTCTGATTATTGATTTTTCGCGAAACCATTTGATCATATGACAAGATGTGTATCCACCTTAACTTAATGATTTTTACCAAAATCATTAGGGGATTCATCAGCGTTTTGTATGGAAATCAGACCTT
CAGTGCAGGTGACTCTGATTTACCATAACATCTGTTATCAGCACCGCCTGAGAGGCCCTCAGGGCGTTTCTGACGGGAAACCGGTAAAACAGGCAACAAACCACCCGAAAACCCGCCAGAAACGCGCAGGCTCTGTTTTTACGGCATGCATGAGTATGCGCACAAGTGCATAGCGCGGAAATTCACACCATTCAGCCGGGGTAAGTCCTGTTTCCGGCGTTCTTCCCATCCGAAAACGGTGAACGGGGACGCAATTTATTGCGTGGCCGTGAAGCGTTGCCGGCGCAGCCGGAAAACCCGCTGTCAGCACGTTCAGGAAGGGGGTGATGTACAAATGGCACAGAGGATGAAAGTGACGTATGAGCTGAAGGAATGATGTAAAAGTGATGTAAAAGTGATGTATAAGTGATGTAAAAGTGATGTAAAAGTGATGTATGAACTGAAGGAGCGATGTAATTCTGTAGTCAGGAAGAATAACCCGTTCATGCAGGCATGAACGATACAGTGAGGAACGCTTTTTTTGTCACGATCTCCCCTTAACCTGCGTAAATCACCCGCCATGGTTGATTATTTTTCAACCTCAAAATGGTCATACACCTAACGCAGCCGCGATTTTCATCGCAACTGCATGAATTAAAAGAAAAAAAAGGAATATTTCGTTTTCACGAGTAATACCCGGGTATTAAAAATCCACTGTAATTACATGAAAATAAAGAAATAAAAGGTAATACCGGAGTATTACCACGTACGCGGGCAAGCGAAAAAGCTATAACGCTTCCCGGCCGACAGGCGACCCAAAATCCACAGGGGCATGCAGGTTCTCTTCAGTAACCTGCGCCATTAAATCAAAAAGGTCATATTCGCCGGGAAGCTGCGTATCAGTCGAATCCAGTTGTTCATCATATTCAGATGGCATGGGGTGATATCCAGTAGCTGAGAGGTTGTTAGCGGGTTTCGGGGCGCAGCCCTGAACCAGTCATGTAGCGCTAGCGGAGTGTATACTGGCTTACTATGTTGCCACGATTGCGAAAATCAGTGAAGTGCTTCATGTGGCAGGAGAAAAAAGGCAGCACCGGCGCGTCAGCAGAATATGCGATACAGGAGATATTCCGCTTCCTCGCTCACTGACTCGCTACGCTCGGTCGTTCGGCTGCGGCGAGCGGTACCGGCTTACGGACGGGGACGGAAATTTCCTGGAAGATACCAGGAAGACACTTAGCAAAGAAGAGATAAGGCCACGGCGAAGCCGTTTTTCCATAGGCTCCGCCCCCCTGACAAGCATCGCAAAATCTGACGCTCAAATCAGTGGTGGCGAAACCCGACAGGACTATAAAGATCCCAGGCGTTTCCCCCTGGTAGCTCCCTCGTGCGCTCTCCTGTTCCTGCCTTTCGGTTTACCGGTGTCATTCCGCTGTTATGGCCGCGGTTTCTCATTCCACGCCTGACACTCAGTTCCGTGAAGGCAGTTCGCTCCAAGCTGGACTGTATGCACGAACCCCCCGTTCAGTCCGACCGCTGCGCCTTGTCCGGTAACTATCAACTTGAGTCCAACCCGGAAAGACACGACAAAACGCCACTGGCAGCAGCCATTAGTAACAGGAGTGCACGAGAAGATAGATTAAGAGGTCTTGAAGTAGAGGCCTGACTGCGGCTACACTGAAAGAACAGTTTTGGTAATGGCGGTCTCGTGAACCCTGTTACCGGGTTAAGCAGTTCCCCAACTGACTTAACCTTCGAACAAACCGCCTCCCCAGGCGGTTTTTTCGTTTACAGAGCAAGAGATTACGATTCATTGAAAAGGATCTCAAGAAGATCCTTTGTAGATTACTATCAATTAATCTTCCGAACATGACACCAGTCACTGTTGATTACGGTTAAACCGCTCCGTAACAGGTTTCCCTCGTATTGGTGACTTGCAGCACCAAAGAAGCAAAAAAGATAAATATAGCCTAGTCCGTAGGCAGGACTTTTCAAGTCTCGGAAGGTTTCTTCAATCTGCATTCGCTTCGAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAGTTGCTAGAACCCATGGCTCCTTTGCCGACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTAGAGCGAGATTTATACAATAGAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAGATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCTTACTCGACTTAACCAGTACCAACCCAGCTTCTCAACGGATTTATACCATGGCACTTTAAAGCCAGCATCACTGACAATGAGCGGTGTGGTGTTACTCGGTAGAATGCTCGCAAGGTCGGCTAGAAATTGGTCATGAGCTTTCTTTGAACATTGCTCTGAAAGCGGGAACGCTTTCTCATAAAGAGTAACAGAACGACCGTGTAGTGCGACTGAAGCTCGCAATACCATAAGTCGTTTTTGCTCACGAATATCAGACCAGTCAACAAGTACAATGGGCATCGTATTGCCCGAACAGATAAAGCTAGCATGCCAACGGTATACAGCGAGTCGCTCTTTGTGGAGGTGACGATTACCTAACAATCGGTCGATTCGTTTGATGTTATGTTTTGTTCTCGCTTTGGTTGGCAGGTTACGGCCAAGTTCGGTAAGAGTGAGAGTTTTACAGTCAAGTAATGCGTGGCAAGCCAACGTTAAGCTGTTGAGTCGTTTTAAGTGTAATTCGGGGCAGAATTGGTAAAGAGAGTCGTGTAAAATATCGAGTTCGCACATCTTGTTGTCTGATTATTGATTTTTCGCGAAACCATTTGATCATATGACAAGATGTGTATCCACCTTAACTTAATGATTTTTACCAAAATCATTAGGGGATTCATCAGCGTTTTGTATGGAAATCAGACCTT
AT-rich region
The information of repeat sequences

Motif TGATGTAAAAG

StartP-valueSite
4183.74e-07GATGTAAAAGTGATGTAAAAGTGATGTATGA
4073.74e-07GATGTATAAGTGATGTAAAAGTGATGTAAAA
3853.74e-07GATGTAAAAGTGATGTAAAAGTGATGTATAA
3743.74e-07GCTGAAGGAATGATGTAAAAGTGATGTAAAA
3967.26e-07GATGTAAAAGTGATGTATAAGTGATGTAAAA

Motif CCCGCCHGACAVGC

StartP-valueSite
12674.84e-08ATAGGCTCCGCCCCCCTGACAAGCATCGCAAAAT
1125.76e-08CACCCGAAAACCCGCCAGAAACGCGCAGGCTCTG
14378.47e-08TTTCTCATTCCACGCCTGACACTCAGTTCCGTGA
7781.03e-07TATAACGCTTCCCGGCCGACAGGCGACCCAAAAT

Motif AAVCVGCTCCBCAACNGRTTT

StartP-valueSite
23384.58e-10ACCAGTACCAACCCAGCTTCTCAACGGATTTATACCATGGC
17084.58e-10TTACCGGGTTAAGCAGTTCCCCAACTGACTTAACCTTCGAA
18777.05e-10GATTACGGTTAAACCGCTCCGTAACAGGTTTCCCTCGTATT
17419.96e-10CCTTCGAACAAACCGCCTCCCCAGGCGGTTTTTTCGTTTAC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000094 100.0 2996 0 0 1 2996 1 2996 0.0 5533
pORI00000093 100.0 1031 0 0 917 1947 1 1031 0.0 1905
pORI00000095 90.427 1452 104 30 377 1818 1725 299 0.0 1879
pORI00000095 95.913 416 17 0 41 456 2105 1690 0.0 675
pORI00000098 90.358 1452 105 30 377 1818 1725 299 0.0 1873
pORI00000098 97.468 395 10 0 41 435 2116 1722 0.0 675
pORI00000244 82.554 1261 159 49 584 1825 1452 234 0.0 1053
pORI00000110 88.498 852 71 17 945 1788 3031 2199 0.0 1005
pORI00000307 86.705 880 91 21 945 1818 1158 299 0.0 953
pORI00000116 86.705 880 91 21 945 1818 1158 299 0.0 953
pORI00000060 83.482 896 105 32 940 1819 1461 2329 0.0 795
pORI00000238 83.296 898 108 32 940 1822 1126 256 0.0 789
pORI00000198 88.927 578 46 15 1248 1816 664 96 0.0 697
pORI00000086 85.801 662 69 19 945 1601 108 749 0.0 678
pORI00000314 87.227 595 60 16 592 1177 1280 693 0.0 664
pORI00000314 95.342 322 14 1 18 338 1877 1556 0.0 510
pORI00000314 84.586 519 67 12 1304 1815 539 27 0.0 503
pORI00000075 87.227 595 60 16 592 1177 1280 693 0.0 664
pORI00000075 95.342 322 14 1 18 338 1877 1556 0.0 510
pORI00000075 84.586 519 67 12 1304 1815 539 27 0.0 503
pORI00000111 80.607 923 114 45 940 1820 946 47 0.0 654
pORI00000061 80.769 884 110 39 948 1812 1010 168 0.0 636
pORI00000069 80.92 870 105 44 940 1773 3980 3136 0.0 630
pORI00000056 85.69 580 55 22 1246 1817 560 1 0.0 586
pORI00000043 82.991 682 66 39 1108 1773 829 182 0.0 571
pORI00000058 77.861 935 132 52 940 1820 921 8 0.0 510
pORI00000320 78.157 792 105 47 940 1676 1036 258 0.0 442
pORI00000312 78.157 792 105 47 940 1676 1036 258 0.0 442
pORI00000012 76.502 932 148 50 939 1815 985 70 0.0 442
pORI00000309 77.183 859 128 49 940 1744 965 121 0.0 438
pORI00000315 78.754 706 95 39 940 1597 1669 971 0.0 422
pORI00000306 76.904 827 120 50 939 1702 211 1029 0.0 403
pORI00000343 76.835 790 117 48 940 1676 78 854 0.0 385
pORI00000112 82.051 468 57 18 1232 1676 1579 1116 0.0 375
pORI00000308 79.888 537 78 24 1232 1744 651 121 0.0 366
pORI00000308 89.888 89 8 1 1078 1165 830 742 1.72e-25 113
pORI00000022 78.268 635 89 38 1232 1826 627 2 0.0 363
pORI00000224 81.148 488 56 25 1248 1702 763 279 0.0 359
pORI00000224 94.03 67 4 0 1108 1174 939 873 3.72e-22 102
pORI00000223 81.148 488 56 25 1248 1702 763 279 0.0 359
pORI00000223 94.03 67 4 0 1108 1174 939 873 3.72e-22 102
pORI00000222 81.148 488 56 25 1248 1702 763 279 0.0 359
pORI00000222 94.03 67 4 0 1108 1174 939 873 3.72e-22 102
pORI00000097 81.148 488 56 25 1248 1702 763 279 0.0 359
pORI00000097 94.03 67 4 0 1108 1174 939 873 3.72e-22 102
pORI00000092 81.148 488 56 25 1248 1702 763 279 0.0 359
pORI00000092 90.625 64 5 1 1111 1174 935 873 1.35e-16 84
pORI00000301 80.943 488 57 25 1248 1702 763 279 0.0 353
pORI00000301 94.03 67 4 0 1108 1174 939 873 3.72e-22 102
pORI00000294 80.943 488 57 25 1248 1702 548 1032 0.0 353
pORI00000294 98.276 58 1 0 1108 1165 372 429 3.72e-22 102
pORI00000292 80.943 488 57 25 1248 1702 548 1032 0.0 353
pORI00000292 98.276 58 1 0 1108 1165 372 429 3.72e-22 102
pORI00000290 80.943 488 57 25 1248 1702 539 1023 0.0 353
pORI00000290 98.276 58 1 0 1108 1165 363 420 3.72e-22 102
pORI00000239 80.943 488 57 25 1248 1702 362 846 0.0 353
pORI00000239 87.778 90 8 3 1078 1165 155 243 3.72e-22 102
pORI00000008 77.96 549 75 37 1311 1820 1103 1644 0.0 302
pORI00000334 73.37 920 171 54 937 1817 101 985 0.0 274
pORI00000322 73.37 920 171 54 937 1817 101 985 0.0 274
pORI00000284 84.737 190 17 6 1247 1425 203 391 1.4013e-45 180
pORI00000234 84.737 190 17 6 1247 1425 203 391 1.4013e-45 180
pORI00000210 84.737 190 17 6 1247 1425 203 391 1.4013e-45 180
pORI00000209 84.737 190 17 6 1247 1425 203 391 1.4013e-45 180
pORI00000240 76.754 228 33 16 939 1163 1315 1105 2.23e-24 110
pORI00000240 100.0 29 0 0 1248 1276 1043 1015 1.06e-07 55
pORI00001057 98.305 59 1 0 1106 1164 702 760 1.04e-22 104
pORI00000947 98.305 59 1 0 1106 1164 724 782 1.04e-22 104
pORI00000921 98.305 59 1 0 1106 1164 337 279 1.04e-22 104
pORI00000446 98.305 59 1 0 1106 1164 337 279 1.04e-22 104
pORI00000072 98.305 59 1 0 1106 1164 530 588 1.04e-22 104
pORI00000031 98.305 59 1 0 1106 1164 532 474 1.04e-22 104
pORI00001164 98.276 58 1 0 1107 1164 817 874 3.72e-22 102
pORI00001144 98.276 58 1 0 1107 1164 308 251 3.72e-22 102
pORI00001062 98.276 58 1 0 1107 1164 591 648 3.72e-22 102
pORI00001056 98.276 58 1 0 1107 1164 817 874 3.72e-22 102
pORI00001020 98.276 58 1 0 1107 1164 308 251 3.72e-22 102
pORI00001011 98.276 58 1 0 1107 1164 817 874 3.72e-22 102
pORI00000834 98.276 58 1 0 1107 1164 817 874 3.72e-22 102
pORI00000702 98.246 57 1 0 1108 1164 704 760 1.34e-21 100