RefSeq NC_019250
DoriC accession number pORI00000112
OriC length 1908 nt
OriC AT content 0.5047
The location of oriC region 2450..314 nt
Browse in NCBI
OriC map
OriC sequences
TCAGAGACAGGCTAAAATGTTGTCAGCGCGTTTCCGGTGCATTTTTTGGGATAATGGTTGGTTCGGGGGCACCGGGAACGCGCTTCAGTCAGACCTTRCTGAAAACACAGGAACGAGTTAAAACGCATACGGGCGCGATTCTGGTGTGTCTTTTGTCGCTGTGTTTTGCCTCTATTGCCAGATCGCGCTCATTCCCCTGAACTTCTGTTTTCCCGCTCAGGTCCCCGTCTTCTTCGCTTCCGAAAGCATGAATAAAATCCGTTTCAGCTGTCTCTGGCTGGCAATTCCTGCGTGATTCACATGGCTGCATAGCTATGCATGTGGTTAAAATTTACCGGGTGCGATCGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCCGAACGCGTTTCAGCGGTGCGTACAATTAAGATATTACGTTAAATTGTGAGGGAATGGTCCCCATATACTGACTTTATCATAGGGATAGGGTTGGTAGTGGGTCGATTGGGTTTCGGCATTGTTTCCGTTAATGCCAATTGCATTTTTGTATTTGATGCAACAGAAGGCGTGAGATTCTCCTGGGCCTGGAAAGGCTAAGTGTTTAGAATTGATGGCAAAATATCTTCCGTCCGATTTTTGAAGTAGTTGTTGTTTGGCTGTCTCCCAAAGGGTGCTGTTACAAACTTCTTGAATTTGTAGTTTTTGCAGGACTCTTATTACTGCGTTGTCATGTTCCAATTCTTTAGGGGAGTGTATTATTCTCTCTTTTAATAAGCTGTTTACCACAGGGTTTAGTTGTTGTCTAAAGCACGCAGATAATGCCATTGCTACACAATTTTGTTCCCGAGGAAGCATGTTTGGCGGGGTATGCCGTGTTTGATGTGATATGTCTATTCTCATAGAAGGTCTCTGGCTTATAGCATCAACAAATACGGCTATAAAACAAAATTTTCATAGAGTGATTCAAGATCTTCTTGAGATCCTTTTTTGCGGCGCGTAATCTGCTGCCKGCAAACAAAAAAACCACCGCTACCAACGGTGGTTTGTTTGCCGGAATCTAGAGCTACCAACTCTTTCTTCCGAAGGTAACTGGCTTGGTGGAGCACAGATACCAAATGCTGTCCTTCTAGTGTAGCCGCAGTTAGGCCACCACTTCAAGAACTCTTAATATCTCAATCCACCTTGTCCAGTTACCAATGGCTGCTGCCAGTGGCGTTAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTASACCGAACTGAGATACCAACAGCGTGAGCTATGAGAAAGCGCCRCGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGGTTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCATCGGCGCGGCCTTCTTCCTGTTCCTGGTCTTTTGCTCACATGTTCTTTCCGGCGTTATCCCCTGATTCTGTGGATAACAGCATTTCGTTTTTGAGTGAGTAGATACCGCTCGCCGCAGTCGAACGACCGAGCGTAGCGAGTCAGTTGAGCGAGGAAGCGGAAAAGCGCCTGGACGTGCATTTTCTCCTTACGCATCTGTGCGGCATTTCACACCCGGTATGGCGCACTTTTCATACAATCCGCACTGATGCCGCATGGTTAAGCCAGTATACACTCCGCTATCGCTACGTGACTGGGTCATGGCTGCGCCCCGACACCCGCTAACACCCGCTGACRMGCCCG
TCAGAGACAGGCTAAAATGTTGTCAGCGCGTTTCCGGTGCATTTTTTGGGATAATGGTTGGTTCGGGGGCACCGGGAACGCGCTTCAGTCAGACCTTRCTGAAAACACAGGAACGAGTTAAAACGCATACGGGCGCGATTCTGGTGTGTCTTTTGTCGCTGTGTTTTGCCTCTATTGCCAGATCGCGCTCATTCCCCTGAACTTCTGTTTTCCCGCTCAGGTCCCCGTCTTCTTCGCTTCCGAAAGCATGAATAAAATCCGTTTCAGCTGTCTCTGGCTGGCAATTCCTGCGTGATTCACATGGCTGCATAGCTATGCATGTGGTTAAAATTTACCGGGTGCGATCGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCCGAACGCGTTTCAGCGGTGCGTACAATTAAGATATTACGTTAAATTGTGAGGGAATGGTCCCCATATACTGACTTTATCATAGGGATAGGGTTGGTAGTGGGTCGATTGGGTTTCGGCATTGTTTCCGTTAATGCCAATTGCATTTTTGTATTTGATGCAACAGAAGGCGTGAGATTCTCCTGGGCCTGGAAAGGCTAAGTGTTTAGAATTGATGGCAAAATATCTTCCGTCCGATTTTTGAAGTAGTTGTTGTTTGGCTGTCTCCCAAAGGGTGCTGTTACAAACTTCTTGAATTTGTAGTTTTTGCAGGACTCTTATTACTGCGTTGTCATGTTCCAATTCTTTAGGGGAGTGTATTATTCTCTCTTTTAATAAGCTGTTTACCACAGGGTTTAGTTGTTGTCTAAAGCACGCAGATAATGCCATTGCTACACAATTTTGTTCCCGAGGAAGCATGTTTGGCGGGGTATGCCGTGTTTGATGTGATATGTCTATTCTCATAGAAGGTCTCTGGCTTATAGCATCAACAAATACGGCTATAAAACAAAATTTTCATAGAGTGATTCAAGATCTTCTTGAGATCCTTTTTTGCGGCGCGTAATCTGCTGCCKGCAAACAAAAAAACCACCGCTACCAACGGTGGTTTGTTTGCCGGAATCTAGAGCTACCAACTCTTTCTTCCGAAGGTAACTGGCTTGGTGGAGCACAGATACCAAATGCTGTCCTTCTAGTGTAGCCGCAGTTAGGCCACCACTTCAAGAACTCTTAATATCTCAATCCACCTTGTCCAGTTACCAATGGCTGCTGCCAGTGGCGTTAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTASACCGAACTGAGATACCAACAGCGTGAGCTATGAGAAAGCGCCRCGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGGTTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCATCGGCGCGGCCTTCTTCCTGTTCCTGGTCTTTTGCTCACATGTTCTTTCCGGCGTTATCCCCTGATTCTGTGGATAACAGCATTTCGTTTTTGAGTGAGTAGATACCGCTCGCCGCAGTCGAACGACCGAGCGTAGCGAGTCAGTTGAGCGAGGAAGCGGAAAAGCGCCTGGACGTGCATTTTCTCCTTACGCATCTGTGCGGCATTTCACACCCGGTATGGCGCACTTTTCATACAATCCGCACTGATGCCGCATGGTTAAGCCAGTATACACTCCGCTATCGCTACGTGACTGGGTCATGGCTGCGCCCCGACACCCGCTAACACCCGCTGACRMGCCCG
AT-rich region
The information of repeat sequences

Motif SAGHTACCAA

StartP-valueSite
11124.68e-07TGGTGGAGCACAGATACCAAATGCTGTCCT
13431.50e-06ASACCGAACTGAGATACCAACAGCGTGAGC
10672.06e-06CCGGAATCTAGAGCTACCAACTCTTTCTTC
11942.68e-06CCACCTTGTCCAGTTACCAATGGCTGCTGC
10334.42e-06AAAAAAACCACCGCTACCAACGGTGGTTTG

Motif AAAATBTTVHBRGCGCGATYCHGGTNCTTYTTBTGGTVBTTTGTT

StartP-valueSite
3272.56e-16GCATGTGGTTAAAATTTACCGGGTGCGATCGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTA
143.17e-16GAGACAGGCTAAAATGTTGTCAGCGCGTTTCCGGTGCATTTTTTGGGATAATGGTTGGTTCGGGG
1212.48e-15GAACGAGTTAAAACGCATACGGGCGCGATTCTGGTGTGTCTTTTGTCGCTGTGTTTTGCCTCTAT
9511.66e-14GCTATAAAACAAAATTTTCATAGAGTGATTCAAGATCTTCTTGAGATCCTTTTTTGCGGCGCGTA
15587.86e-14AGCCTATGGAAAAACGCCATCGGCGCGGCCTTCTTCCTGTTCCTGGTCTTTTGCTCACATGTTCT

Motif AAAGCAHGHABAHAHTCCGHT

StartP-valueSite
2431.00e-12TTCGCTTCCGAAAGCATGAATAAAATCCGTTTCAGCTGTCT
18262.60e-09GCCGCATGGTTAAGCCAGTATACACTCCGCTATCGCTACGT
8113.17e-09GTTGTTGTCTAAAGCACGCAGATAATGCCATTGCTACACAA
9233.82e-09TCTCTGGCTTATAGCATCAACAAATACGGCTATAAAACAAA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000112 100.0 1908 0 0 1 1908 1 1908 0.0 3502
pORI00000320 95.127 944 41 5 967 1907 108 1049 0.0 1493
pORI00000312 95.127 944 41 5 967 1907 108 1049 0.0 1493
pORI00000306 93.006 958 46 15 967 1907 1152 199 0.0 1387
pORI00000058 89.563 939 76 18 974 1907 13 934 0.0 1181
pORI00000343 89.267 941 86 14 974 1907 997 65 0.0 1173
pORI00000239 90.562 890 52 22 974 1837 961 78 0.0 1155
pORI00000022 88.458 953 82 22 974 1907 12 955 0.0 1134
pORI00000012 88.118 951 88 21 967 1907 62 997 0.0 1116
pORI00000309 91.98 798 47 15 1117 1907 191 978 0.0 1110
pORI00000315 90.0 850 60 20 1063 1907 853 1682 0.0 1083
pORI00000301 91.476 786 40 17 974 1735 164 946 0.0 1061
pORI00000294 91.476 786 40 17 974 1735 1147 365 0.0 1061
pORI00000292 91.476 786 40 17 974 1735 1147 365 0.0 1061
pORI00000290 91.476 786 40 17 974 1735 1138 356 0.0 1061
pORI00000224 91.349 786 41 17 974 1735 164 946 0.0 1055
pORI00000223 91.349 786 41 17 974 1735 164 946 0.0 1055
pORI00000222 91.349 786 41 17 974 1735 164 946 0.0 1055
pORI00000097 91.349 786 41 17 974 1735 164 946 0.0 1055
pORI00000092 91.108 776 41 18 974 1725 164 935 0.0 1031
pORI00000308 91.633 741 44 16 1117 1850 191 920 0.0 1013
pORI00000111 84.569 823 92 31 1091 1907 166 959 0.0 793
pORI00000094 82.051 468 57 18 1116 1579 1676 1232 0.0 375
pORI00000093 82.051 468 57 18 1116 1579 760 316 0.0 375
pORI00000008 79.745 548 79 26 974 1500 1639 1103 0.0 374
pORI00000198 81.366 483 58 26 1090 1565 209 666 0.0 366
pORI00000086 79.537 562 75 27 1025 1583 901 377 0.0 366
pORI00000244 78.356 596 82 37 974 1563 243 797 0.0 346
pORI00000061 77.85 614 90 37 977 1584 168 741 0.0 340
pORI00000043 82.946 387 47 13 1194 1579 346 714 0.0 333
pORI00000060 77.338 631 93 37 974 1591 2325 1732 0.0 331
pORI00000060 96.386 83 3 0 1825 1907 1530 1448 5e-34 141
pORI00000110 79.878 492 63 27 1091 1579 2287 2745 0.0 329
pORI00000240 86.348 293 24 14 1616 1907 1050 1327 0.0 309
pORI00000240 89.655 58 3 1 1522 1579 1002 1056 6.66e-13 71
pORI00000307 76.835 613 93 42 974 1579 302 872 0.0 305
pORI00000116 76.835 613 93 42 974 1579 302 872 0.0 305
pORI00000098 76.835 613 93 42 974 1579 302 872 0.0 305
pORI00000095 76.835 613 93 42 974 1579 302 872 0.0 305
pORI00000056 81.989 372 46 15 1194 1563 206 558 0.0 298
pORI00000069 76.923 468 68 24 1117 1563 3232 3680 0.0 231
pORI00000238 96.386 83 3 0 1825 1907 1057 1139 5e-34 141
pORI00000284 84.354 147 11 4 1428 1563 349 204 8.37e-32 134
pORI00000234 84.354 147 11 4 1428 1563 349 204 8.37e-32 134
pORI00000210 84.354 147 11 4 1428 1563 349 204 8.37e-32 134
pORI00000209 84.354 147 11 4 1428 1563 349 204 8.37e-32 134
pORI00000181 96.667 60 2 0 1826 1885 784 725 8.49e-22 100
pORI00000990 89.744 78 7 1 1655 1732 602 678 3.05e-21 99
pORI00000914 96.491 57 1 1 1672 1728 654 709 1.42e-19 94
pORI00000595 96.491 57 1 1 1672 1728 654 709 1.42e-19 94
pORI00000478 96.491 57 1 1 1672 1728 298 353 1.42e-19 94
pORI00000124 93.548 62 2 1 1826 1885 783 844 5.11e-19 92
pORI00000011 93.333 60 3 1 1826 1885 784 842 6.61e-18 88