RefSeq NC_015472
DoriC accession number pORI00000072
OriC length 1061 nt
OriC AT content 0.6107
The location of oriC region 1819..2879 nt
Browse in NCBI
OriC map
OriC sequences
TATAGATAAGTCGTATCACTTGGCTAAATGATAACCCTATAAAGGTTGTATGACAACAACACATTACAACCTTTAGTTAAAAAACTTATCACCTTTAGATATAAAGATCTTTATGTATTCACATCAAAATGAATTCATAACATCATGTTTTACATGATATTTTTTTAGCCTGTGGATGTACTTAAAAATCCTCTCACCTTTCGTTAAAAATCCTCTCATCTTTAGTGAAAAATCTTCTCACCCTTACTTAAAAATCTTCTCACCTTATGTTAAAGATCCTCTCACCTTACGTTAAAAATCCTCTCATGTTTAGCGTTTTTTTATTATATTTATCATAATGTTACGACGCTCTAAGTTTTTAAGTTTTTAAGATCAAGAAGAAAAGATAAGTTTTTTAAATGCACAGCGCCTGTGGATAACTTTGCGTAAACCCGGAGGACAGATCACTCTGAACCAAGACAACCACACATAAAAACAATATGCTCATTTTTTAACCACTGTGCGTAAGTGCCTAATGTAATCCCTGTGCTATTCCGCTTCCTCGCTCACTAACTCGCTACGCTCGGTCGTTCGGCTGCGGCGAGCGGTGTCTCCTTTCTCAAAACCAGAAGAGTTCAGCTCATACGATCCGTTGATTGATCCTTTTTGGATCTTTCACTGAGAAGCCCTGAATCGCTTTCTGCCGCTTCGTTCGATACAACCATGGTGAAAACATGCGAAATCGAAAAAATCGCTCAGAATGCGATACAGCGCGTTTTAGAGGGTATTTACAAAACAGTCGTTGCCTTGAGGAAATTTTGATCAAGATTGAACTCCTATCCGGATCATGGCAACAGATCACAGCAACAAGGCCGCTAAAAAGCGTTGAGCGGCGTTAAAAACCGTTAAACCGTAGCTGACTACAACGAAACGGGAAAAAACGCTCAGAACGCGTTACAGAGCGTTTTAAGGCGATGTCGGAAAGAGCCATATCTCACCTGTTCTGATGTTTTTCTCAACATAAGCACTTTTAAGAGTGCTTTTAAAGATGCTATTATGCCAATGAGACAAGCGGAGGGCTT
TATAGATAAGTCGTATCACTTGGCTAAATGATAACCCTATAAAGGTTGTATGACAACAACACATTACAACCTTTAGTTAAAAAACTTATCACCTTTAGATATAAAGATCTTTATGTATTCACATCAAAATGAATTCATAACATCATGTTTTACATGATATTTTTTTAGCCTGTGGATGTACTTAAAAATCCTCTCACCTTTCGTTAAAAATCCTCTCATCTTTAGTGAAAAATCTTCTCACCCTTACTTAAAAATCTTCTCACCTTATGTTAAAGATCCTCTCACCTTACGTTAAAAATCCTCTCATGTTTAGCGTTTTTTTATTATATTTATCATAATGTTACGACGCTCTAAGTTTTTAAGTTTTTAAGATCAAGAAGAAAAGATAAGTTTTTTAAATGCACAGCGCCTGTGGATAACTTTGCGTAAACCCGGAGGACAGATCACTCTGAACCAAGACAACCACACATAAAAACAATATGCTCATTTTTTAACCACTGTGCGTAAGTGCCTAATGTAATCCCTGTGCTATTCCGCTTCCTCGCTCACTAACTCGCTACGCTCGGTCGTTCGGCTGCGGCGAGCGGTGTCTCCTTTCTCAAAACCAGAAGAGTTCAGCTCATACGATCCGTTGATTGATCCTTTTTGGATCTTTCACTGAGAAGCCCTGAATCGCTTTCTGCCGCTTCGTTCGATACAACCATGGTGAAAACATGCGAAATCGAAAAAATCGCTCAGAATGCGATACAGCGCGTTTTAGAGGGTATTTACAAAACAGTCGTTGCCTTGAGGAAATTTTGATCAAGATTGAACTCCTATCCGGATCATGGCAACAGATCACAGCAACAAGGCCGCTAAAAAGCGTTGAGCGGCGTTAAAAACCGTTAAACCGTAGCTGACTACAACGAAACGGGAAAAAACGCTCAGAACGCGTTACAGAGCGTTTTAAGGCGATGTCGGAAAGAGCCATATCTCACCTGTTCTGATGTTTTTCTCAACATAAGCACTTTTAAGAGTGCTTTTAAAGATGCTATTATGCCAATGAGACAAGCGGAGGGCTT
AT-rich region
The information of repeat sequences

Motif AAVATCYTCTCACCTTTMGTTAAAAATCYTCTCAYCTTTAG

StartP-valueSite
1851.84e-23GATGTACTTAAAAATCCTCTCACCTTTCGTTAAAAATCCTCTCATCTTTAGTGAAAAATCT
2733.23e-21CCTTATGTTAAAGATCCTCTCACCTTACGTTAAAAATCCTCTCATGTTTAGCGTTTTTTTA
2291.40e-19TCTTTAGTGAAAAATCTTCTCACCCTTACTTAAAAATCTTCTCACCTTATGTTAAAGATCC
581.86e-18GTATGACAACAACACATTACAACCTTTAGTTAAAAAACTTATCACCTTTAGATATAAAGAT

Motif RCGAAVYCGVWAARADCSVTCDNDMNGCKDTACAGAGCGTT

StartP-valueSite
9051.37e-18GCTGACTACAACGAAACGGGAAAAAACGCTCAGAACGCGTTACAGAGCGTTTTAAGGCGAT
7162.80e-17GTGAAAACATGCGAAATCGAAAAAATCGCTCAGAATGCGATACAGCGCGTTTTAGAGGGTA
5485.41e-15TTCCTCGCTCACTAACTCGCTACGCTCGGTCGTTCGGCTGCGGCGAGCGGTGTCTCCTTTC
8462.54e-14GATCACAGCAACAAGGCCGCTAAAAAGCGTTGAGCGGCGTTAAAAACCGTTAAACCGTAGC
9514.20e-13GCGTTTTAAGGCGATGTCGGAAAGAGCCATATCTCACCTGTTCTGATGTTTTTCTCAACAT

Motif GCCTGTGG

StartP-valueSite
4083.87e-06AATGCACAGCGCCTGTGGATAACTTTGC
1683.87e-06TATTTTTTTAGCCTGTGGATGTACTTAA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000072 100.0 1061 0 0 1 1061 1 1061 0.0 1960
pORI00000990 92.554 1061 72 7 1 1056 1206 148 0.0 1515
pORI00000031 99.697 660 2 0 402 1061 660 1 0.0 1208
pORI00000702 96.842 665 20 1 397 1061 569 1232 0.0 1110
pORI00000421 96.177 654 24 1 409 1061 654 1 0.0 1068
pORI00001062 91.414 594 47 3 349 940 409 1000 0.0 811
pORI00001057 97.021 470 12 1 397 864 569 1038 0.0 789
pORI00000921 96.596 470 14 1 397 864 470 1 0.0 778
pORI00000446 96.596 470 14 1 397 864 470 1 0.0 778
pORI00000947 96.186 472 14 2 397 864 591 1062 0.0 769
pORI00000834 89.126 515 50 5 435 946 721 1232 0.0 636
pORI00001164 90.594 404 37 1 435 837 721 1124 0.0 534
pORI00001144 90.099 404 39 1 435 837 404 1 0.0 523
pORI00001056 90.099 404 39 1 435 837 721 1124 0.0 523
pORI00001020 90.099 404 39 1 435 837 404 1 0.0 523
pORI00001011 90.099 404 39 1 435 837 721 1124 0.0 523
pORI00000595 95.27 148 3 4 915 1061 145 1 0.0 231
pORI00000595 92.958 71 3 1 531 601 710 642 1.3e-22 102
pORI00000914 94.595 148 4 3 915 1061 145 1 0.0 226
pORI00000914 92.958 71 3 1 531 601 710 642 1.3e-22 102
pORI00000343 92.308 78 6 0 527 604 239 316 2.17e-25 111
pORI00000308 98.361 61 1 0 528 588 803 743 2.8e-24 108
pORI00000094 98.305 59 1 0 530 588 1106 1164 3.62e-23 104
pORI00000093 98.305 59 1 0 530 588 190 248 3.62e-23 104
pORI00000478 92.958 71 3 1 531 601 354 286 1.3e-22 102
pORI00000320 90.789 76 7 0 528 603 874 799 1.3e-22 102
pORI00000315 90.789 76 7 0 528 603 1507 1432 1.3e-22 102
pORI00000312 90.789 76 7 0 528 603 874 799 1.3e-22 102
pORI00000309 90.789 76 7 0 528 603 803 728 1.3e-22 102
pORI00000307 96.667 60 2 0 530 589 997 938 4.69e-22 100
pORI00000116 96.667 60 2 0 530 589 997 938 4.69e-22 100
pORI00000111 95.238 63 3 0 533 595 781 719 4.69e-22 100
pORI00000110 96.667 60 2 0 530 589 2870 2811 4.69e-22 100
pORI00000098 96.667 60 2 0 530 589 997 938 4.69e-22 100
pORI00000095 96.667 60 2 0 530 589 997 938 4.69e-22 100
pORI00000301 89.474 76 8 0 528 603 943 868 6.06e-21 97
pORI00000294 95.082 61 3 0 528 588 368 428 6.06e-21 97
pORI00000292 95.082 61 3 0 528 588 368 428 6.06e-21 97
pORI00000290 95.082 61 3 0 528 588 359 419 6.06e-21 97
pORI00000239 95.082 61 3 0 528 588 182 242 6.06e-21 97
pORI00000224 89.474 76 8 0 528 603 943 868 6.06e-21 97
pORI00000223 89.474 76 8 0 528 603 943 868 6.06e-21 97
pORI00000222 89.474 76 8 0 528 603 943 868 6.06e-21 97
pORI00000097 89.474 76 8 0 528 603 943 868 6.06e-21 97
pORI00000058 89.474 76 8 0 528 603 760 685 6.06e-21 97
pORI00000240 92.424 66 3 2 539 604 1151 1088 7.85e-20 94
pORI00000092 86.957 69 8 1 535 603 935 868 7.9e-15 77