RefSeq NC_011204
DoriC accession number pORI00000446
OriC length 1016 nt
OriC AT content 0.6102
The location of oriC region 69961..70976 nt
Browse in NCBI
OriC map
OriC sequences
CGCTTTTTAGCGGCCTTGTTGCTGTGATCTGTTGCCATGATCCGGATAGAAGTTCAATTTTGATCAAAATTTCCTCAAGGCAACGACTGTTTTGTAAATACCCTCTAAAACGCGCTGTATCGCATTCTGAGTGATTTTTTCGATTTCGCATGGTTTTTAACTATGGTTGTATCGAACGAAGCGGCAGAAAGCGATTCAGGGCTTCTCAGTGAAAGATCCAAAAAGGATCAATCAACGGATCGTATGATCTGAACTCTTCTGGTTTTGAGAAAGGAGACACCGCTCGCCGCAGCCGAACGACCGAGCGTAGCGAGTTAGTGAGCGAGGAAGCGGAATAGCACAGGGATTACATCAGGCACTTACGCACAGTGGTTAAAAAGCGAGCATGTTGTTTTTATGTGTGGTTGTCCTGGTTCAGCGTGATCTGTCCTCCGGGTTTACGCAAAGTTATCCACAGGCACTGTGAATTTTTTGTTTTGAGCAGAGTTATCCACAGATTTTTTGTGTTTTTTTGCTTATTAAACTTCTTGTTTTTAAGATCTTAAATGTAGATCGGTAGATCTACTTTAAGATCTTTAACTTATTTTAACTTATTCTGCAAACATTGTGCCAAGTTTTTTATCAATAATTTCATTAAGATAGGTGTTGTTTTTTGTCGCCTCAAAATGAAAGGTGGATGGGTACGCACTGTAATTTTCATGAAAGGTGGATGGCTGCGCACTGAAAGGTGGATGGGTACGCACTGAAAGGTGGATGGGTACGCATTTTTCTGTTTTTATTCAGATATTCGTATCTTTGTATCTTCATTTCTTTAGTTCTTTATAGTGCTCTAATTTAACGTATGACGTTAAAAGGTGGATGCCTGCGCATTTCTATCATATTGAATATAAATGATAAAAATTCTTTCATGTGATCCGAGTTTTGGTGGAAATCTATAAGGTGGATAAACCACTTTACACATTTCCGCTTTTGTGGTTATGATTTCACCATCAGAACTTAAAAAACACAGGTAATGT
CGCTTTTTAGCGGCCTTGTTGCTGTGATCTGTTGCCATGATCCGGATAGAAGTTCAATTTTGATCAAAATTTCCTCAAGGCAACGACTGTTTTGTAAATACCCTCTAAAACGCGCTGTATCGCATTCTGAGTGATTTTTTCGATTTCGCATGGTTTTTAACTATGGTTGTATCGAACGAAGCGGCAGAAAGCGATTCAGGGCTTCTCAGTGAAAGATCCAAAAAGGATCAATCAACGGATCGTATGATCTGAACTCTTCTGGTTTTGAGAAAGGAGACACCGCTCGCCGCAGCCGAACGACCGAGCGTAGCGAGTTAGTGAGCGAGGAAGCGGAATAGCACAGGGATTACATCAGGCACTTACGCACAGTGGTTAAAAAGCGAGCATGTTGTTTTTATGTGTGGTTGTCCTGGTTCAGCGTGATCTGTCCTCCGGGTTTACGCAAAGTTATCCACAGGCACTGTGAATTTTTTGTTTTGAGCAGAGTTATCCACAGATTTTTTGTGTTTTTTTGCTTATTAAACTTCTTGTTTTTAAGATCTTAAATGTAGATCGGTAGATCTACTTTAAGATCTTTAACTTATTTTAACTTATTCTGCAAACATTGTGCCAAGTTTTTTATCAATAATTTCATTAAGATAGGTGTTGTTTTTTGTCGCCTCAAAATGAAAGGTGGATGGGTACGCACTGTAATTTTCATGAAAGGTGGATGGCTGCGCACTGAAAGGTGGATGGGTACGCACTGAAAGGTGGATGGGTACGCATTTTTCTGTTTTTATTCAGATATTCGTATCTTTGTATCTTCATTTCTTTAGTTCTTTATAGTGCTCTAATTTAACGTATGACGTTAAAAGGTGGATGCCTGCGCATTTCTATCATATTGAATATAAATGATAAAAATTCTTTCATGTGATCCGAGTTTTGGTGGAAATCTATAAGGTGGATAAACCACTTTACACATTTCCGCTTTTGTGGTTATGATTTCACCATCAGAACTTAAAAAACACAGGTAATGT
AT-rich region
The information of repeat sequences

Motif TGAAAGGTGGATGGSTRCGCA

StartP-valueSite
7441.76e-13GGGTACGCACTGAAAGGTGGATGGGTACGCATTTTTCTGTT
7221.76e-13GGCTGCGCACTGAAAGGTGGATGGGTACGCACTGAAAGGTG
6671.76e-13CGCCTCAAAATGAAAGGTGGATGGGTACGCACTGTAATTTT
7005.73e-13GTAATTTTCATGAAAGGTGGATGGCTGCGCACTGAAAGGTG
8492.23e-12CGTATGACGTTAAAAGGTGGATGCCTGCGCATTTCTATCAT

Motif RCAVVGWTHDCCDCAGVC

StartP-valueSite
4423.20e-10CCGGGTTTACGCAAAGTTATCCACAGGCACTGTGAATT
2774.21e-09GAGAAAGGAGACACCGCTCGCCGCAGCCGAACGACCGA
4816.32e-09TTTGTTTTGAGCAGAGTTATCCACAGATTTTTTGTGTT
3404.19e-08GCGGAATAGCACAGGGATTACATCAGGCACTTACGCAC

Motif YRTGATCYG

StartP-valueSite
9098.50e-06AATTCTTTCATGTGATCCGAGTTTTGGTG
4198.50e-06CCTGGTTCAGCGTGATCTGTCCTCCGGGT
361.05e-05GATCTGTTGCCATGATCCGGATAGAAGTT
231.74e-05GCCTTGTTGCTGTGATCTGTTGCCATGAT
2433.39e-05CAACGGATCGTATGATCTGAACTCTTCTG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000446 100.0 1016 0 0 1 1016 1 1016 0.0 1877
pORI00000921 97.881 1038 0 1 1 1016 1 1038 0.0 1775
pORI00000921 100.0 43 0 0 722 764 667 709 5.84e-16 81
pORI00000921 95.745 47 2 0 699 745 666 712 7.56e-15 77
pORI00001057 97.399 1038 5 1 1 1016 1038 1 0.0 1748
pORI00001057 97.674 43 1 0 722 764 372 330 2.72e-14 75
pORI00000947 95.292 1062 4 3 1 1016 1062 1 0.0 1642
pORI00000947 100.0 43 0 0 722 764 394 352 5.84e-16 81
pORI00000947 94.0 50 3 0 699 748 395 346 7.56e-15 77
pORI00000031 95.472 1038 23 2 1 1016 198 1233 0.0 1635
pORI00000031 97.674 43 1 0 722 764 862 904 2.72e-14 75
pORI00000702 94.22 1038 36 2 1 1016 1036 1 0.0 1563
pORI00000702 100.0 43 0 0 722 764 372 330 5.84e-16 81
pORI00000702 94.0 50 3 0 699 748 373 324 7.56e-15 77
pORI00000421 93.588 655 36 5 1 653 198 848 0.0 972
pORI00000072 96.596 470 14 1 1 470 864 397 0.0 778
pORI00000990 94.268 471 24 2 1 470 341 809 0.0 717
pORI00000834 87.565 579 65 5 1 576 1151 577 0.0 664
pORI00001062 92.144 471 33 4 1 470 924 457 0.0 662
pORI00001164 87.138 552 64 5 28 576 1124 577 0.0 619
pORI00001144 85.406 603 72 13 28 623 1 594 0.0 612
pORI00001056 85.406 603 72 13 28 623 1124 531 0.0 612
pORI00001020 85.406 603 72 13 28 623 1 594 0.0 612
pORI00001011 85.406 603 72 13 28 623 1124 531 0.0 612
pORI00000343 92.308 78 6 0 263 340 316 239 2.07e-25 111
pORI00000308 98.361 61 1 0 279 339 743 803 2.68e-24 108
pORI00000094 98.305 59 1 0 279 337 1164 1106 3.47e-23 104
pORI00000093 98.305 59 1 0 279 337 248 190 3.47e-23 104
pORI00000914 92.958 71 3 1 266 336 642 710 1.25e-22 102
pORI00000595 92.958 71 3 1 266 336 642 710 1.25e-22 102
pORI00000478 92.958 71 3 1 266 336 286 354 1.25e-22 102
pORI00000320 90.789 76 7 0 264 339 799 874 1.25e-22 102
pORI00000315 90.789 76 7 0 264 339 1432 1507 1.25e-22 102
pORI00000312 90.789 76 7 0 264 339 799 874 1.25e-22 102
pORI00000309 90.789 76 7 0 264 339 728 803 1.25e-22 102
pORI00000307 96.667 60 2 0 278 337 938 997 4.49e-22 100
pORI00000116 96.667 60 2 0 278 337 938 997 4.49e-22 100
pORI00000111 95.238 63 3 0 272 334 719 781 4.49e-22 100
pORI00000110 96.667 60 2 0 278 337 2811 2870 4.49e-22 100
pORI00000098 96.667 60 2 0 278 337 938 997 4.49e-22 100
pORI00000095 96.667 60 2 0 278 337 938 997 4.49e-22 100
pORI00000301 89.474 76 8 0 264 339 868 943 5.8e-21 97
pORI00000294 95.082 61 3 0 279 339 428 368 5.8e-21 97
pORI00000292 95.082 61 3 0 279 339 428 368 5.8e-21 97
pORI00000290 95.082 61 3 0 279 339 419 359 5.8e-21 97
pORI00000239 95.082 61 3 0 279 339 242 182 5.8e-21 97
pORI00000224 89.474 76 8 0 264 339 868 943 5.8e-21 97
pORI00000223 89.474 76 8 0 264 339 868 943 5.8e-21 97
pORI00000222 89.474 76 8 0 264 339 868 943 5.8e-21 97
pORI00000097 89.474 76 8 0 264 339 868 943 5.8e-21 97
pORI00000058 89.474 76 8 0 264 339 685 760 5.8e-21 97
pORI00000240 92.424 66 3 2 263 328 1088 1151 7.51e-20 94
pORI00000092 86.957 69 8 1 264 332 868 935 7.56e-15 77