RefSeq NC_019053
DoriC accession number pORI00000092
OriC length 2208 nt
OriC AT content 0.486
The location of oriC region 3070..2208 nt
Browse in NCBI
OriC map
OriC sequences
CTGTCAGACCAAGTTTACTCATATATACTTTAGATTGATTTAAAACTTCATTTTTAATTTAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAGATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGTTCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGCTCGCCGCAGCCGAACGACCGAGCGCAGCGAGTCACTGAGCGAGAAGCGAGAGCGCCCATACGCAACCGCCTCTCCCCGCGCGTTGGCGATTCATTAATGCAGCTGGCACGACAGGCTCTAGCCGAACGACCGAGCGCAGCGAGTCAGTGAGCGAGGAAGCGGAAGAGCGCCCAATACGCAAACCGCCTCTCCCCGCGCGTTGGCCGATTCATTAATGCAGCTGGCACGACAGGTTTCCCGACTGGAAAGCGGGCAGTGAGCGCAACGCAATTAATGTGAGTTAGCTCACTCATTAGGCACCCCAGGCTTTACACTTTATGCTTCCGGCTCGTATGTTGTGTGGAATTGTGAGCGGATAACAATTTCACACAGGAAACAGCTATGACCATGATTACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGATTGTTACATTGTTACGACTTCACAACTCTGAGCCAGTAGCAAACTCTACCATGGTCGGTTACCTTGTTACGACTTGTCTCGGAGCCAGGATCAAACGCTACCATGGTAGGTTCACTTGTTCCGACTTGTCTCTGAGCCAGGAGCAAACTCTAGCTACTTCATGGAGTAGGTTACCTTGTTAAGACTTCACAATTCGGAGCCATTAGCAAACTCTACCATGGACGGTTACCTTGTTCCGACTTGTCGGAGCCAGGAGCAAACTCTTAATCGTCGACCTGCAGGCATGCAAGCTTGGCACTGGCCGTCGTTTTACAACGTCGTGACTGGGAAAACCCTGGCGTTACCCAACTTAATCGCCTTGCAGCACATCCCCCTTTCGCCAGCTGGCGTAATAGCGAAGAGGCCCGCACCGATCGCCCTTCCCAACAGTTGCGCAGCCTGAATGGCGAATGGCGCCTGATGCGGTATTTTCTCCTTACGCATCTGTGCGGTATTTCACACCGCATATGGTGCACTCTCAGTACAATCTGCTCTGATGCCGCATAGTTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCGGCATCCGCTTACAGACAAGCTGTGACCGTCTCCGGGAGCTGCATGTGTCAGAGGTTTTCACCGTCATCACCGAAACGCGCGAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGATAATAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGT
CTGTCAGACCAAGTTTACTCATATATACTTTAGATTGATTTAAAACTTCATTTTTAATTTAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAGATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGTTCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGCTCGCCGCAGCCGAACGACCGAGCGCAGCGAGTCACTGAGCGAGAAGCGAGAGCGCCCATACGCAACCGCCTCTCCCCGCGCGTTGGCGATTCATTAATGCAGCTGGCACGACAGGCTCTAGCCGAACGACCGAGCGCAGCGAGTCAGTGAGCGAGGAAGCGGAAGAGCGCCCAATACGCAAACCGCCTCTCCCCGCGCGTTGGCCGATTCATTAATGCAGCTGGCACGACAGGTTTCCCGACTGGAAAGCGGGCAGTGAGCGCAACGCAATTAATGTGAGTTAGCTCACTCATTAGGCACCCCAGGCTTTACACTTTATGCTTCCGGCTCGTATGTTGTGTGGAATTGTGAGCGGATAACAATTTCACACAGGAAACAGCTATGACCATGATTACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGATTGTTACATTGTTACGACTTCACAACTCTGAGCCAGTAGCAAACTCTACCATGGTCGGTTACCTTGTTACGACTTGTCTCGGAGCCAGGATCAAACGCTACCATGGTAGGTTCACTTGTTCCGACTTGTCTCTGAGCCAGGAGCAAACTCTAGCTACTTCATGGAGTAGGTTACCTTGTTAAGACTTCACAATTCGGAGCCATTAGCAAACTCTACCATGGACGGTTACCTTGTTCCGACTTGTCGGAGCCAGGAGCAAACTCTTAATCGTCGACCTGCAGGCATGCAAGCTTGGCACTGGCCGTCGTTTTACAACGTCGTGACTGGGAAAACCCTGGCGTTACCCAACTTAATCGCCTTGCAGCACATCCCCCTTTCGCCAGCTGGCGTAATAGCGAAGAGGCCCGCACCGATCGCCCTTCCCAACAGTTGCGCAGCCTGAATGGCGAATGGCGCCTGATGCGGTATTTTCTCCTTACGCATCTGTGCGGTATTTCACACCGCATATGGTGCACTCTCAGTACAATCTGCTCTGATGCCGCATAGTTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCGGCATCCGCTTACAGACAAGCTGTGACCGTCTCCGGGAGCTGCATGTGTCAGAGGTTTTCACCGTCATCACCGAAACGCGCGAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGATAATAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGT
AT-rich region
The information of repeat sequences

Motif TCKGAGCCAGKAGCAAACTCTACCWTGKTCRGTTACCTKGTTVCGACTTK

StartP-valueSite
13443.22e-29ACTTCACAACTCTGAGCCAGTAGCAAACTCTACCATGGTCGGTTACCTTGTTACGACTTGTCTCGGAGCC
15112.13e-26ACTTCACAATTCGGAGCCATTAGCAAACTCTACCATGGACGGTTACCTTGTTCCGACTTGTCGGAGCCAG
13969.75e-24ACGACTTGTCTCGGAGCCAGGATCAAACGCTACCATGGTAGGTTCACTTGTTCCGACTTGTCTCTGAGCC
14483.14e-19CCGACTTGTCTCTGAGCCAGGAGCAAACTCTAGCTACTTCATGGAGTAGGTTACCTTGTTAAGACTTCAC
15613.87e-18TTCCGACTTGTCGGAGCCAGGAGCAAACTCTTAATCGTCGACCTGCAGGCATGCAAGCTTGGCACTGGCC

Motif CGAKTCABTRAKSSAGVWRGSASRACAGS

StartP-valueSite
10927.31e-15GCGCGTTGGCCGATTCATTAATGCAGCTGGCACGACAGGTTTCCCGACT
9747.31e-15CGCGCGTTGGCGATTCATTAATGCAGCTGGCACGACAGGCTCTAGCCGA
10274.62e-12CCGAGCGCAGCGAGTCAGTGAGCGAGGAAGCGGAAGAGCGCCCAATACG
5784.62e-12GAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAA
9151.65e-11CCGAGCGCAGCGAGTCACTGAGCGAGAAGCGAGAGCGCCCATACGCAAC

Motif TSATWWWTDHTTTAAAWDBATTBAAA

StartP-valueSite
195.18e-13CCAAGTTTACTCATATATACTTTAGATTGATTTAAAACTTCATTTT
21731.79e-11ACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGT
483.69e-11ATTTAAAACTTCATTTTTAATTTAAAAGGATCTAGGTGAAGATCCT
21194.88e-11AACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000092 100.0 2208 0 0 1 2208 1 2208 0.0 4078
pORI00000092 93.86 114 1 6 1007 1120 895 1002 9.56947e-42 167
pORI00000092 93.86 114 1 6 895 1002 1007 1120 9.56947e-42 167
pORI00000224 99.306 1008 1 6 1 1002 1 1008 0.0 1818
pORI00000224 100.0 232 0 0 1593 1824 1128 1359 0.0 429
pORI00000224 100.0 144 0 0 1007 1150 895 1038 0.0 267
pORI00000223 99.306 1008 1 6 1 1002 1 1008 0.0 1818
pORI00000223 100.0 422 0 0 1587 2008 1203 1624 0.0 780
pORI00000223 99.677 310 0 1 1007 1316 895 1203 0.0 566
pORI00000222 99.306 1008 1 6 1 1002 1 1008 0.0 1818
pORI00000222 100.0 277 0 0 1007 1283 895 1171 0.0 512
pORI00000222 100.0 136 0 0 2073 2208 2329 2464 0.0 252
pORI00000222 100.0 50 0 0 1823 1872 2301 2252 1.65e-19 94
pORI00000097 99.306 1008 1 6 1 1002 1 1008 0.0 1818
pORI00000097 100.0 622 0 0 1587 2208 1723 2344 0.0 1149
pORI00000097 99.673 306 0 1 1007 1312 895 1199 0.0 558
pORI00000097 100.0 28 0 0 1289 1316 1696 1723 2.8e-07 53
pORI00000301 99.206 1008 2 6 1 1002 1 1008 0.0 1812
pORI00000301 100.0 277 0 0 1007 1283 895 1171 0.0 512
pORI00000294 99.095 995 3 6 1 989 1310 316 0.0 1783
pORI00000294 100.0 101 0 0 1007 1107 416 316 0.0 187
pORI00000292 99.095 995 3 6 1 989 1310 316 0.0 1783
pORI00000292 100.0 101 0 0 1007 1107 416 316 0.0 187
pORI00000290 99.095 995 3 6 1 989 1301 307 0.0 1783
pORI00000290 100.0 101 0 0 1007 1107 407 307 0.0 187
pORI00000239 99.471 946 2 3 1 943 1124 179 0.0 1716
pORI00000239 100.0 103 0 0 1770 1872 183 81 0.0 191
pORI00000239 100.0 52 0 0 1007 1058 230 179 1.27e-20 97
pORI00000306 93.4 803 33 12 148 943 1160 371 0.0 1171
pORI00000306 95.192 104 5 0 1872 1975 232 129 3.44005e-41 165
pORI00000320 92.337 796 33 18 151 941 103 875 0.0 1107
pORI00000320 98.0 50 1 0 1007 1056 826 875 7.66e-18 88
pORI00000320 94.118 51 3 0 1872 1922 1016 1066 4.61e-15 79
pORI00000312 92.337 796 33 18 151 941 103 875 0.0 1107
pORI00000312 98.0 50 1 0 1007 1056 826 875 7.66e-18 88
pORI00000312 94.118 51 3 0 1872 1922 1016 1066 4.61e-15 79
pORI00000112 91.108 776 41 18 164 935 974 1725 0.0 1031
pORI00000022 89.66 793 56 18 160 943 8 783 0.0 987
pORI00000022 100.0 52 0 0 1007 1058 732 783 1.27e-20 97
pORI00000022 94.118 51 3 0 1872 1922 922 972 4.61e-15 79
pORI00000012 86.94 804 65 29 148 943 55 826 0.0 867
pORI00000012 92.157 102 7 1 1872 1973 964 1064 1.61e-34 143
pORI00000012 96.154 52 2 0 1007 1058 775 826 2.76e-17 86
pORI00000343 86.517 801 73 23 148 940 1013 240 0.0 848
pORI00000343 95.789 95 4 0 1872 1966 98 4 7.45e-38 154
pORI00000343 100.0 49 0 0 1007 1055 288 240 5.92e-19 92
pORI00000058 86.946 789 62 29 152 935 1 753 0.0 848
pORI00000058 94.203 138 8 0 1872 2009 901 1038 0.0 211
pORI00000058 98.077 52 1 0 1007 1058 712 763 5.92e-19 92
pORI00000315 92.754 552 24 9 396 943 971 1510 0.0 784
pORI00000315 95.05 101 5 0 1872 1972 1649 1749 1.6e-39 159
pORI00000315 91.262 103 9 0 1770 1872 1506 1608 5.8e-34 141
pORI00000315 98.077 52 1 0 1007 1058 1459 1510 5.92e-19 92
pORI00000309 92.364 550 24 12 398 943 271 806 0.0 767
pORI00000309 92.157 102 8 0 1872 1973 945 1046 4.48e-35 145
pORI00000309 98.077 52 1 0 1007 1058 755 806 5.92e-19 92
pORI00000308 92.407 540 25 10 398 935 271 796 0.0 756
pORI00000111 84.268 642 52 27 306 943 192 788 0.0 582
pORI00000111 96.154 52 1 1 1007 1058 738 788 2.76e-17 86
pORI00000111 94.118 51 3 0 1872 1922 926 976 4.61e-15 79
pORI00000008 81.283 561 81 22 152 700 1651 1103 0.0 433
pORI00000094 81.148 488 56 25 279 763 1702 1248 0.0 359
pORI00000094 94.545 55 2 1 882 935 1165 1111 9.91e-17 84
pORI00000093 81.148 488 56 25 279 763 786 332 0.0 359
pORI00000093 94.545 55 2 1 882 935 249 195 9.91e-17 84
pORI00000086 83.375 397 43 19 388 782 753 378 0.0 346
pORI00000198 80.567 494 54 30 278 765 209 666 0.0 342
pORI00000043 83.505 388 41 17 396 780 348 715 0.0 340
pORI00000110 82.741 394 46 18 388 779 2372 2745 0.0 331
pORI00000110 96.296 54 1 1 883 935 2812 2865 7.66e-18 88
pORI00000110 100.0 45 0 0 1007 1051 2824 2868 9.91e-17 84
pORI00000060 77.259 642 92 40 160 791 2329 1732 0.0 327
pORI00000060 100.0 147 0 0 1 147 1 147 0.0 272
pORI00000060 92.453 106 8 0 1872 1977 1481 1376 2.68e-37 152
pORI00000060 100.0 34 0 0 115 148 3368 3335 1.29e-10 64
pORI00000244 83.243 370 40 16 396 763 448 797 0.0 320
pORI00000061 82.188 393 47 17 396 786 372 743 0.0 316
pORI00000056 82.385 369 46 15 396 763 208 558 0.0 303
pORI00000307 76.471 629 83 50 161 779 299 872 0.0 281
pORI00000307 96.296 54 1 1 883 935 939 992 7.66e-18 88
pORI00000307 100.0 45 0 0 1007 1051 951 995 9.91e-17 84
pORI00000116 76.471 629 83 50 161 779 299 872 0.0 281
pORI00000116 96.296 54 1 1 883 935 939 992 7.66e-18 88
pORI00000116 100.0 45 0 0 1007 1051 951 995 9.91e-17 84
pORI00000098 76.471 629 83 50 161 779 299 872 0.0 281
pORI00000098 96.296 54 1 1 883 935 939 992 7.66e-18 88
pORI00000098 100.0 45 0 0 1007 1051 951 995 9.91e-17 84
pORI00000095 76.471 629 83 50 161 779 299 872 0.0 281
pORI00000095 96.296 54 1 1 883 935 939 992 7.66e-18 88
pORI00000095 100.0 45 0 0 1007 1051 951 995 9.91e-17 84
pORI00000069 76.768 495 78 28 306 786 3232 3703 0.0 243
pORI00000240 94.949 99 5 0 1872 1970 1294 1392 2.07e-38 156
pORI00000240 80.851 94 16 2 837 930 1058 1149 2.15e-13 73
pORI00000240 86.441 59 5 1 722 780 1002 1057 4.64e-10 62
pORI00000238 92.453 106 8 0 1872 1977 1106 1211 2.68e-37 152
pORI00000284 85.034 147 10 5 628 763 349 204 2.09e-33 139
pORI00000234 85.034 147 10 5 628 763 349 204 2.09e-33 139
pORI00000210 85.034 147 10 5 628 763 349 204 2.09e-33 139
pORI00000209 85.034 147 10 5 628 763 349 204 2.09e-33 139
pORI00001164 92.593 54 3 1 883 935 874 821 1.66e-14 77
pORI00001144 86.957 69 8 1 868 935 236 304 1.66e-14 77
pORI00001062 92.593 54 3 1 883 935 648 595 1.66e-14 77
pORI00001057 92.593 54 3 1 883 935 760 707 1.66e-14 77
pORI00001056 92.593 54 3 1 883 935 874 821 1.66e-14 77
pORI00001020 86.957 69 8 1 868 935 236 304 1.66e-14 77
pORI00001011 92.593 54 3 1 883 935 874 821 1.66e-14 77
pORI00000947 92.593 54 3 1 883 935 782 729 1.66e-14 77
pORI00000921 86.957 69 8 1 868 935 264 332 1.66e-14 77
pORI00000834 92.593 54 3 1 883 935 874 821 1.66e-14 77
pORI00000702 92.593 54 3 1 883 935 760 707 1.66e-14 77
pORI00000446 86.957 69 8 1 868 935 264 332 1.66e-14 77
pORI00000072 92.593 54 3 1 883 935 588 535 1.66e-14 77
pORI00000031 86.957 69 8 1 868 935 459 527 1.66e-14 77