RefSeq NZ_CP024861
DoriC accession number pORI00001062
OriC length 1105 nt
OriC AT content 0.5982
The location of oriC region 9007..10111 nt
Browse in NCBI
OriC map
OriC sequences
TCTCATTGTTCCAACACTCTTGATAATCAGACTTTAACACCAGAAACATGATATTACAACACAATCAATATCATGTTTAACCGAGTATCTTCTCATGTTTCATATCTGTGATTTATCTCACAAAGGTAATCCATGCTCAAAATCCGCACTGGATTCAAGGCAGATTAACAACAGATTCAAAATAGATTCACCAGAAAGAACAACGAATTAGTATTCTTATGACACATTTTGTGGATATCACCGAGGAAGCTCTCATGTTTAACCGAGGAAGTTATCATGTTTAACCGAGGAAGCTCTCATGTTTAACCGAGGAAGCTCTCATGTTTAACCGAGGAAGTTATCATGTTTAACCGAGGAAGCTCTCATGTTTAGACAAAAAACACGCTTAAAATCAATAAATTAGATCTACTCTAAGTTTTTAAGTTTTTAAGATCAAGAAGAAAAGATAAGTTTTTTAAATGCACAGTGCCTGTGGATAACTTTGCGTAAACCCGGAGGATAGATCACTCTGAACCAGGACAACCACACATAAAAACACTATGCTCGCTTTTTAACCACTGCGCGTAAGTGCCTGATGCTAGCCCGACGCAATTCCGCTTCCTCGCTCACTAACTCGCTACGCTCGGTCGTTCGGCTGCGGCGAGCGGTGTCTCCTTTCTCAAAACCTGAAGAGTTCAGATCATACGATCCGTTGATTGATCCTTTTTGGATCTTTCACTGAGAAGCCCTGAATCGCTCTCTGCCGCTTCGTTCGATACAACCATGAGGAAAACATGCGAAATGAAAAAAATCGCTTAAAACGCGATACAGCGCGTTTTAGGGGGTATTCACAAAACACACGTTGCCTTGAAGAAATTTTGATCAAGATTTAACTACTATCCGGATCATGACAACAGATCATAGCAACAAGGCTGCTAAAAAGCGTTGAGAGACGTTAAACGCTGTTAAGACTAGGGCTAAGTACAATGAAACGGAAAAAATGCTCAGAATGCGTTACAGAACCTTCCAGAAAGCTAAGGTTTGTCACTTTAAAGAGACATTTTTCTTGATCTAGTGTCACTTATAAGAGACAATGTACACAGGTTAAGGGAATGAGGGCGGCAAG
TCTCATTGTTCCAACACTCTTGATAATCAGACTTTAACACCAGAAACATGATATTACAACACAATCAATATCATGTTTAACCGAGTATCTTCTCATGTTTCATATCTGTGATTTATCTCACAAAGGTAATCCATGCTCAAAATCCGCACTGGATTCAAGGCAGATTAACAACAGATTCAAAATAGATTCACCAGAAAGAACAACGAATTAGTATTCTTATGACACATTTTGTGGATATCACCGAGGAAGCTCTCATGTTTAACCGAGGAAGTTATCATGTTTAACCGAGGAAGCTCTCATGTTTAACCGAGGAAGCTCTCATGTTTAACCGAGGAAGTTATCATGTTTAACCGAGGAAGCTCTCATGTTTAGACAAAAAACACGCTTAAAATCAATAAATTAGATCTACTCTAAGTTTTTAAGTTTTTAAGATCAAGAAGAAAAGATAAGTTTTTTAAATGCACAGTGCCTGTGGATAACTTTGCGTAAACCCGGAGGATAGATCACTCTGAACCAGGACAACCACACATAAAAACACTATGCTCGCTTTTTAACCACTGCGCGTAAGTGCCTGATGCTAGCCCGACGCAATTCCGCTTCCTCGCTCACTAACTCGCTACGCTCGGTCGTTCGGCTGCGGCGAGCGGTGTCTCCTTTCTCAAAACCTGAAGAGTTCAGATCATACGATCCGTTGATTGATCCTTTTTGGATCTTTCACTGAGAAGCCCTGAATCGCTCTCTGCCGCTTCGTTCGATACAACCATGAGGAAAACATGCGAAATGAAAAAAATCGCTTAAAACGCGATACAGCGCGTTTTAGGGGGTATTCACAAAACACACGTTGCCTTGAAGAAATTTTGATCAAGATTTAACTACTATCCGGATCATGACAACAGATCATAGCAACAAGGCTGCTAAAAAGCGTTGAGAGACGTTAAACGCTGTTAAGACTAGGGCTAAGTACAATGAAACGGAAAAAATGCTCAGAATGCGTTACAGAACCTTCCAGAAAGCTAAGGTTTGTCACTTTAAAGAGACATTTTTCTTGATCTAGTGTCACTTATAAGAGACAATGTACACAGGTTAAGGGAATGAGGGCGGCAAG
AT-rich region
The information of repeat sequences

Motif ACCGAGGAAGCTCTCATGTTT

StartP-valueSite
3501.57e-13ATCATGTTTAACCGAGGAAGCTCTCATGTTTAGACAAAAAA
3061.57e-13CTCATGTTTAACCGAGGAAGCTCTCATGTTTAACCGAGGAA
2841.57e-13ATCATGTTTAACCGAGGAAGCTCTCATGTTTAACCGAGGAA
2401.57e-13TGTGGATATCACCGAGGAAGCTCTCATGTTTAACCGAGGAA
3289.17e-13CTCATGTTTAACCGAGGAAGTTATCATGTTTAACCGAGGAA

Motif AAASRDAAAAMAYGCTYAAAATSCG

StartP-valueSite
9692.59e-12AAGTACAATGAAACGGAAAAAATGCTCAGAATGCGTTACAGAACC
1221.37e-11TTTATCTCACAAAGGTAATCCATGCTCAAAATCCGCACTGGATTC
7808.34e-11AAACATGCGAAATGAAAAAAATCGCTTAAAACGCGATACAGCGCG
3711.44e-10TCTCATGTTTAGACAAAAAACACGCTTAAAATCAATAAATTAGAT

Motif AACHSASTATGYTCDCWTGTT

StartP-valueSite
791.51e-10TATCATGTTTAACCGAGTATCTTCTCATGTTTCATATCTGT
5325.72e-09ACCACACATAAAAACACTATGCTCGCTTTTTAACCACTGCG
2615.72e-09TCTCATGTTTAACCGAGGAAGTTATCATGTTTAACCGAGGA
6111.68e-08CTCGCTCACTAACTCGCTACGCTCGGTCGTTCGGCTGCGGC
10652.82e-08TGTCACTTATAAGAGACAATGTACACAGGTTAAGGGAATGA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00001062 100.0 1105 0 0 1 1105 1 1105 0.0 2041
pORI00001062 95.455 88 4 0 284 371 240 327 2.88e-34 141
pORI00001062 95.455 88 4 0 240 327 284 371 2.88e-34 141
pORI00001062 100.0 66 0 0 306 371 240 305 1.04e-28 122
pORI00001062 100.0 66 0 0 240 305 306 371 1.04e-28 122
pORI00000999 95.954 519 16 5 590 1105 517 1 0.0 837
pORI00000999 98.026 456 8 1 7 462 1248 794 0.0 791
pORI00000999 95.455 88 4 0 240 327 971 884 2.88e-34 141
pORI00000999 95.455 88 4 0 284 371 1015 928 2.88e-34 141
pORI00000999 100.0 66 0 0 240 305 949 884 1.04e-28 122
pORI00000999 100.0 66 0 0 306 371 1015 950 1.04e-28 122
pORI00000578 95.954 519 16 5 590 1105 517 1 0.0 837
pORI00000578 98.246 456 7 1 7 462 1248 794 0.0 797
pORI00000578 95.455 88 4 0 240 327 971 884 2.88e-34 141
pORI00000578 95.455 88 4 0 284 371 1015 928 2.88e-34 141
pORI00000578 100.0 66 0 0 240 305 949 884 1.04e-28 122
pORI00000578 100.0 66 0 0 306 371 1015 950 1.04e-28 122
pORI00000990 91.933 595 44 4 409 1000 857 264 0.0 830
pORI00000072 91.414 594 47 3 409 1000 349 940 0.0 811
pORI00001192 98.268 462 7 1 1 462 1051 591 0.0 808
pORI00001192 91.667 240 15 5 590 825 314 76 0.0 327
pORI00001192 95.455 88 4 0 240 327 768 681 2.88e-34 141
pORI00001192 95.455 88 4 0 284 371 812 725 2.88e-34 141
pORI00001192 100.0 66 0 0 240 305 746 681 1.04e-28 122
pORI00001192 100.0 66 0 0 306 371 812 747 1.04e-28 122
pORI00000968 98.268 462 7 1 1 462 1051 591 0.0 808
pORI00000968 91.667 240 15 5 590 825 314 76 0.0 327
pORI00000968 95.455 88 4 0 240 327 768 681 2.88e-34 141
pORI00000968 95.455 88 4 0 284 371 812 725 2.88e-34 141
pORI00000968 100.0 66 0 0 240 305 746 681 1.04e-28 122
pORI00000968 100.0 66 0 0 306 371 812 747 1.04e-28 122
pORI00000723 98.268 462 7 1 1 462 1 461 0.0 808
pORI00000723 91.667 240 15 5 590 825 738 976 0.0 327
pORI00000723 95.455 88 4 0 284 371 240 327 2.88e-34 141
pORI00000723 95.455 88 4 0 240 327 284 371 2.88e-34 141
pORI00000723 100.0 66 0 0 306 371 240 305 1.04e-28 122
pORI00000723 100.0 66 0 0 240 305 306 371 1.04e-28 122
pORI00000722 98.268 462 7 1 1 462 1 461 0.0 808
pORI00000722 91.667 240 15 5 590 825 738 976 0.0 327
pORI00000722 95.455 88 4 0 284 371 240 327 2.88e-34 141
pORI00000722 95.455 88 4 0 240 327 284 371 2.88e-34 141
pORI00000722 100.0 66 0 0 306 371 240 305 1.04e-28 122
pORI00000722 100.0 66 0 0 240 305 306 371 1.04e-28 122
pORI00000998 97.835 462 9 1 1 462 1051 591 0.0 797
pORI00000998 91.667 240 15 5 590 825 314 76 0.0 327
pORI00000998 97.727 88 2 0 240 327 768 681 1.33e-37 152
pORI00000998 93.182 88 6 0 284 371 812 725 6.23e-31 130
pORI00000998 100.0 66 0 0 306 371 812 747 1.04e-28 122
pORI00000998 96.97 66 2 0 240 305 746 681 2.26e-25 111
pORI00000604 98.246 456 7 1 7 462 1045 591 0.0 797
pORI00000604 91.667 240 15 5 590 825 314 76 0.0 327
pORI00000604 95.455 88 4 0 240 327 768 681 2.88e-34 141
pORI00000604 95.455 88 4 0 284 371 812 725 2.88e-34 141
pORI00000604 100.0 66 0 0 240 305 746 681 1.04e-28 122
pORI00000604 100.0 66 0 0 306 371 812 747 1.04e-28 122
pORI00001059 97.403 462 11 1 1 462 1052 592 0.0 785
pORI00001059 91.667 240 15 5 590 825 314 76 0.0 327
pORI00001059 100.0 88 0 0 284 371 813 726 6.15002e-41 163
pORI00001059 93.182 88 6 0 240 327 769 682 6.23e-31 130
pORI00001059 100.0 66 0 0 240 305 747 682 1.04e-28 122
pORI00001059 93.939 66 4 0 306 371 813 748 4.89e-22 100
pORI00001059 95.455 44 2 0 328 371 813 770 3.83e-13 71
pORI00001058 97.403 462 11 1 1 462 1051 591 0.0 785
pORI00001058 91.667 240 15 5 590 825 314 76 0.0 327
pORI00001058 100.0 88 0 0 284 371 812 725 6.15002e-41 163
pORI00001058 93.182 88 6 0 240 327 768 681 6.23e-31 130
pORI00001058 100.0 66 0 0 240 305 746 681 1.04e-28 122
pORI00001058 93.939 66 4 0 306 371 812 747 4.89e-22 100
pORI00001058 95.455 44 2 0 328 371 812 769 3.83e-13 71
pORI00000031 90.556 540 49 2 462 1000 660 122 0.0 713
pORI00000548 94.737 456 23 1 7 462 1 455 0.0 708
pORI00000548 91.667 240 15 5 590 825 732 970 0.0 327
pORI00000548 100.0 88 0 0 284 371 234 321 6.15002e-41 163
pORI00000548 93.939 66 4 0 306 371 234 299 4.89e-22 100
pORI00000548 92.424 66 5 0 240 305 300 365 2.27e-20 95
pORI00000548 97.727 44 1 0 240 283 322 365 8.24e-15 77
pORI00000548 95.455 44 2 0 328 371 234 277 3.83e-13 71
pORI00000702 89.908 545 52 3 457 1000 569 1111 0.0 699
pORI00000421 89.56 546 54 3 457 1000 666 122 0.0 689
pORI00000834 90.73 507 45 2 495 1000 721 1226 0.0 675
pORI00000834 97.674 86 2 0 1020 1105 1300 1385 1.72e-36 148
pORI00001057 92.34 470 34 2 457 924 569 1038 0.0 667
pORI00000921 92.144 471 33 4 457 924 470 1 0.0 662
pORI00000446 92.144 471 33 4 457 924 470 1 0.0 662
pORI00000947 91.525 472 36 3 457 924 591 1062 0.0 647
pORI00001164 90.099 404 39 1 495 897 721 1124 0.0 523
pORI00001144 89.604 404 41 1 495 897 404 1 0.0 512
pORI00001056 89.604 404 41 1 495 897 721 1124 0.0 512
pORI00001020 89.604 404 41 1 495 897 404 1 0.0 512
pORI00001011 89.604 404 41 1 495 897 721 1124 0.0 512
pORI00000697 88.163 245 19 8 239 479 254 492 0.0 283
pORI00000697 94.595 111 6 0 240 350 277 387 1.02295e-43 172
pORI00000697 93.86 114 6 1 259 371 251 364 3.6714e-43 171
pORI00000697 96.629 89 3 0 240 328 299 387 1.72e-36 148
pORI00000697 95.652 92 3 1 281 371 251 342 6.19e-36 147
pORI00000697 98.507 67 1 0 240 306 321 387 1.35e-27 119
pORI00000697 97.143 70 1 1 303 371 251 320 4.85e-27 117
pORI00000343 90.244 82 8 0 583 664 235 316 2.92e-24 108
pORI00000320 90.123 81 8 0 583 663 879 799 1.05e-23 106
pORI00000312 90.123 81 8 0 583 663 879 799 1.05e-23 106
pORI00000308 95.455 66 3 0 583 648 808 743 1.05e-23 106
pORI00000914 92.958 71 3 1 591 661 710 642 1.36e-22 102
pORI00000595 92.958 71 3 1 591 661 710 642 1.36e-22 102
pORI00000478 92.958 71 3 1 591 661 354 286 1.36e-22 102
pORI00000094 98.276 58 1 0 591 648 1107 1164 1.36e-22 102
pORI00000093 98.276 58 1 0 591 648 191 248 1.36e-22 102
pORI00000315 91.667 72 6 0 592 663 1503 1432 4.89e-22 100
pORI00000309 91.667 72 6 0 592 663 799 728 4.89e-22 100
pORI00000111 95.238 63 3 0 593 655 781 719 4.89e-22 100
pORI00000307 96.61 59 2 0 591 649 996 938 1.76e-21 99
pORI00000116 96.61 59 2 0 591 649 996 938 1.76e-21 99
pORI00000110 96.61 59 2 0 591 649 2869 2811 1.76e-21 99
pORI00000098 96.61 59 2 0 591 649 996 938 1.76e-21 99
pORI00000095 96.61 59 2 0 591 649 996 938 1.76e-21 99
pORI00000301 90.278 72 7 0 592 663 939 868 2.27e-20 95
pORI00000294 96.491 57 2 0 592 648 372 428 2.27e-20 95
pORI00000292 96.491 57 2 0 592 648 372 428 2.27e-20 95
pORI00000290 96.491 57 2 0 592 648 363 419 2.27e-20 95
pORI00000239 96.491 57 2 0 592 648 186 242 2.27e-20 95
pORI00000224 90.278 72 7 0 592 663 939 868 2.27e-20 95
pORI00000223 90.278 72 7 0 592 663 939 868 2.27e-20 95
pORI00000222 90.278 72 7 0 592 663 939 868 2.27e-20 95
pORI00000097 90.278 72 7 0 592 663 939 868 2.27e-20 95
pORI00000058 90.278 72 7 0 592 663 756 685 2.27e-20 95
pORI00000240 92.424 66 3 2 599 664 1151 1088 8.18e-20 94
pORI00000092 86.957 69 8 1 595 663 935 868 8.24e-15 77