RefSeq NC_020279
DoriC accession number pORI00000234
OriC length 396 nt
OriC AT content 0.4293
The location of oriC region 2697..3092 nt
Browse in NCBI
OriC map
OriC sequences
CCACCGCGCGAACACGCTAAAGCCCCACCATCGGAGCTATTCCGCTTCCAAGATCGGACAGACTCGCCAAAGCTACGCAATGGCTCCCTAATCCGATCTTGCGGCGAGCGGTGGGAATTAACAGGGAAGGGTTAGACACAGATTCTGTGGGAAAGCAGGCGCGCAAGCTGTGCAACGAGCGCCAACCGAAGACGACGAAACCCCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCTTCACAGAAATTCGGTGATTTCCGGTGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTTAAAGATACCGGGGATTTCTCCCCGATGGCTCCCTCGTGCGCTCTCCTGTTCCTGCCTTGCGGTTTATCGGTGTCTATCCGCTGTTATGGCCGCGTATTC
CCACCGCGCGAACACGCTAAAGCCCCACCATCGGAGCTATTCCGCTTCCAAGATCGGACAGACTCGCCAAAGCTACGCAATGGCTCCCTAATCCGATCTTGCGGCGAGCGGTGGGAATTAACAGGGAAGGGTTAGACACAGATTCTGTGGGAAAGCAGGCGCGCAAGCTGTGCAACGAGCGCCAACCGAAGACGACGAAACCCCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCTTCACAGAAATTCGGTGATTTCCGGTGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTTAAAGATACCGGGGATTTCTCCCCGATGGCTCCCTCGTGCGCTCTCCTGTTCCTGCCTTGCGGTTTATCGGTGTCTATCCGCTGTTATGGCCGCGTATTC

AT-rich region
The information of repeat sequences

Motif ATGGCTCCCTMRTSCGMTCT

StartP-valueSite
801.68e-12AAGCTACGCAATGGCTCCCTAATCCGATCTTGCGGCGAGC
3221.87e-11TTTCTCCCCGATGGCTCCCTCGTGCGCTCTCCTGTTCCTG

Motif CVGAHHHTCGGDGHHWDYCSGCKBBCAAG

StartP-valueSite
2411.85e-13ACGAGCTTCACAGAAATTCGGTGATTTCCGGTGCTCAAGTCAGAGGTGG
3573.87e-11TCCTGCCTTGCGGTTTATCGGTGTCTATCCGCTGTTATGGCCGCGTATT
249.57e-11ACGCTAAAGCCCCACCATCGGAGCTATTCCGCTTCCAAGATCGGACAGA
1391.24e-10GGGTTAGACACAGATTCTGTGGGAAAGCAGGCGCGCAAGCTGTGCAACG

Motif GGAMTTAA

StartP-valueSite
1147.38e-06GCGAGCGGTGGGAATTAACAGGGAAGGG
2921.75e-05AAACCCGACAGGACTTAAAGATACCGGG

The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000284 100.0 396 0 0 1 396 1 396 0.0 732
pORI00000234 100.0 396 0 0 1 396 1 396 0.0 732
pORI00000210 100.0 396 0 0 1 396 1 396 0.0 732
pORI00000209 100.0 396 0 0 1 396 1 396 0.0 732
pORI00000111 87.831 189 12 4 204 392 618 441 0.0 211
pORI00000069 86.911 191 13 6 203 392 3681 3502 0.0 204
pORI00000043 86.911 191 13 6 203 392 699 520 0.0 204
pORI00000244 86.842 190 14 5 203 392 798 620 0.0 202
pORI00000110 86.842 190 14 5 203 392 2730 2552 0.0 202
pORI00000056 85.864 191 15 5 203 392 559 380 0.0 193
pORI00000086 85.864 191 14 7 203 392 396 574 0.0 191
pORI00000061 85.185 189 17 5 203 391 721 544 0.0 183
pORI00000060 84.817 191 17 6 203 392 1758 1937 0.0 182
pORI00000094 84.737 190 17 6 203 391 1247 1425 0.0 180
pORI00000093 84.737 190 17 6 203 391 331 509 0.0 180
pORI00000238 84.293 191 17 7 203 392 829 651 9.80909e-45 174
pORI00000198 82.812 192 18 9 204 392 664 485 9.92999e-40 158
pORI00000309 84.756 164 14 3 204 367 635 483 1.28e-38 154
pORI00000308 84.146 164 15 3 204 367 635 483 5.98e-37 148
pORI00000343 86.111 144 9 4 206 349 412 544 7.73e-36 145
pORI00000058 83.537 164 15 4 204 367 592 441 2.78e-35 143
pORI00000320 83.03 165 16 5 204 367 705 552 3.6e-34 139
pORI00000312 83.03 165 16 5 204 367 705 552 3.6e-34 139
pORI00000301 83.03 165 16 5 204 367 763 610 3.6e-34 139
pORI00000294 85.034 147 10 5 204 349 548 683 3.6e-34 139
pORI00000292 85.034 147 10 5 204 349 548 683 3.6e-34 139
pORI00000290 85.034 147 10 5 204 349 539 674 3.6e-34 139
pORI00000239 85.034 147 10 5 204 349 362 497 3.6e-34 139
pORI00000224 83.03 165 16 5 204 367 763 610 3.6e-34 139
pORI00000223 83.03 165 16 5 204 367 763 610 3.6e-34 139
pORI00000222 83.03 165 16 5 204 367 763 610 3.6e-34 139
pORI00000097 83.03 165 16 5 204 367 763 610 3.6e-34 139
pORI00000092 83.03 165 16 5 204 367 763 610 3.6e-34 139
pORI00000307 80.628 191 24 7 203 392 857 679 4.65e-33 135
pORI00000116 80.628 191 24 7 203 392 857 679 4.65e-33 135
pORI00000098 80.628 191 24 7 203 392 857 679 4.65e-33 135
pORI00000095 80.628 191 24 7 203 392 857 679 4.65e-33 135
pORI00000315 82.424 165 17 4 204 367 1338 1185 1.67e-32 134
pORI00000306 84.354 147 11 5 204 349 543 678 1.67e-32 134
pORI00000112 82.424 165 17 4 204 367 1563 1410 1.67e-32 134
pORI00000022 82.424 165 17 5 204 367 611 458 1.67e-32 134
pORI00000012 82.424 165 17 5 204 367 654 501 1.67e-32 134
pORI00000314 83.607 122 20 0 271 392 539 418 6.06e-27 115
pORI00000075 83.607 122 20 0 271 392 539 418 6.06e-27 115
pORI00000240 93.023 43 2 1 204 246 1043 1002 8.01e-11 62