RefSeq NC_025010
DoriC accession number pORI00000239
OriC length 1124 nt
OriC AT content 0.5116
The location of oriC region 948..2071 nt
Browse in NCBI
OriC map
OriC sequences
AAGATCCTTAAATTTTTATTATCTAGCTAGATGATAATATTATATCAAGAATTGTACCTGAAAGCAAATAAATTTTTTATCTGGCTTAACTATGCGGCATCAGAGCAGATTGTACTGAGAGTGCACCATATGCGGTGTGAAATACCGCACAGATGCGTAAGGAGAAAATACCGCATCAGGCGCTCTTCCGCTTCCTCGCTCACTGACTCGCTGCGCTCGGTCGTTCGGCTGCGGCGAGCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATCTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTAAATTAAAAATGAAGTTTTAAATCAATCTAAAGTATATATGAGTAAACTTGGTCTGACAG
AAGATCCTTAAATTTTTATTATCTAGCTAGATGATAATATTATATCAAGAATTGTACCTGAAAGCAAATAAATTTTTTATCTGGCTTAACTATGCGGCATCAGAGCAGATTGTACTGAGAGTGCACCATATGCGGTGTGAAATACCGCACAGATGCGTAAGGAGAAAATACCGCATCAGGCGCTCTTCCGCTTCCTCGCTCACTGACTCGCTGCGCTCGGTCGTTCGGCTGCGGCGAGCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATCTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTAAATTAAAAATGAAGTTTTAAATCAATCTAAAGTATATATGAGTAAACTTGGTCTGACAG
AT-rich region
The information of repeat sequences

Motif TGCGCTCTBCYG

StartP-valueSite
8239.37e-08ATTTGGTATCTGCGCTCTGCTGAAGCCAGTTA
4829.37e-08AGCTCCCTCGTGCGCTCTCCTGTTCCGACCCT
1792.71e-06TACCGCATCAGGCGCTCTTCCGCTTCCTCGCT
2124.01e-06ACTGACTCGCTGCGCTCGGTCGTTCGGCTGCG
3777.00e-06TTCCATAGGCTCCGCCCCCCTGACGAGCATCA

Motif GGCGTTTBYHCMTAG

StartP-valueSite
3609.46e-09CCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCC
5493.66e-08CGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGT
4569.25e-08AAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTC
7541.56e-06GAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGT
5951.76e-06TTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTG

Motif AAAAGGCC

StartP-valueSite
3441.76e-05AGGAACCGTAAAAAGGCCGCGTTGCTGG
3261.76e-05AAAGGCCAGCAAAAGGCCAGGAACCGTA
3151.76e-05ACATGTGAGCAAAAGGCCAGCAAAAGGC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000239 100.0 1124 0 0 1 1124 1 1124 0.0 2076
pORI00000301 100.0 946 0 0 179 1124 946 1 0.0 1748
pORI00000294 99.894 946 1 0 179 1124 365 1310 0.0 1742
pORI00000292 99.894 946 1 0 179 1124 365 1310 0.0 1742
pORI00000290 99.894 946 1 0 179 1124 356 1301 0.0 1742
pORI00000224 99.894 946 1 0 179 1124 946 1 0.0 1742
pORI00000224 100.0 55 0 0 129 183 1359 1305 1.38e-22 102
pORI00000223 99.894 946 1 0 179 1124 946 1 0.0 1742
pORI00000223 100.0 103 0 0 81 183 1488 1386 0.0 191
pORI00000222 99.894 946 1 0 179 1124 946 1 0.0 1742
pORI00000222 100.0 50 0 0 81 130 2252 2301 8.32e-20 94
pORI00000097 99.894 946 1 0 179 1124 946 1 0.0 1742
pORI00000097 100.0 103 0 0 81 183 2008 1906 0.0 191
pORI00000092 99.471 946 2 3 179 1124 943 1 0.0 1716
pORI00000092 100.0 103 0 0 81 183 1872 1770 0.0 191
pORI00000092 100.0 52 0 0 179 230 1058 1007 6.43e-21 97
pORI00000306 92.629 909 41 17 78 977 269 1160 0.0 1284
pORI00000320 91.916 903 41 21 78 974 979 103 0.0 1234
pORI00000312 91.916 903 41 21 78 974 979 103 0.0 1234
pORI00000112 90.562 890 52 22 78 961 1837 974 0.0 1155
pORI00000022 89.855 897 63 20 78 965 885 8 0.0 1127
pORI00000012 86.923 910 73 34 78 977 928 55 0.0 979
pORI00000343 86.454 908 86 25 78 977 135 1013 0.0 961
pORI00000058 86.519 905 73 36 78 973 865 1 0.0 950
pORI00000315 92.966 654 32 7 78 729 1612 971 0.0 941
pORI00000309 92.061 655 30 15 78 727 908 271 0.0 902
pORI00000308 90.979 654 38 14 78 727 907 271 0.0 861
pORI00000111 83.824 748 65 34 78 819 889 192 0.0 662
pORI00000008 81.462 561 80 22 425 973 1103 1651 0.0 438
pORI00000094 80.943 488 57 25 362 846 1248 1702 0.0 353
pORI00000094 87.778 90 8 3 155 243 1078 1165 1.38e-22 102
pORI00000093 80.943 488 57 25 362 846 332 786 0.0 353
pORI00000093 87.778 90 8 3 155 243 162 249 1.38e-22 102
pORI00000198 80.769 494 53 30 360 847 666 209 0.0 348
pORI00000086 83.375 397 43 19 343 737 378 753 0.0 346
pORI00000043 83.505 388 41 17 345 729 715 348 0.0 340
pORI00000060 77.414 642 91 40 334 965 1732 2329 0.0 333
pORI00000060 100.0 147 0 0 978 1124 147 1 0.0 272
pORI00000060 100.0 34 0 0 977 1010 3335 3368 6.52e-11 64
pORI00000110 82.741 394 46 18 346 737 2745 2372 0.0 331
pORI00000110 88.764 89 7 3 155 242 2898 2812 1.07e-23 106
pORI00000244 83.243 370 40 16 362 729 797 448 0.0 320
pORI00000061 82.188 393 47 17 339 729 743 372 0.0 316
pORI00000056 82.385 369 46 15 362 729 558 208 0.0 303
pORI00000307 76.312 629 84 50 346 964 872 299 0.0 276
pORI00000307 100.0 57 0 0 186 242 995 939 1.07e-23 106
pORI00000116 76.312 629 84 50 346 964 872 299 0.0 276
pORI00000116 100.0 57 0 0 186 242 995 939 1.07e-23 106
pORI00000098 76.312 629 84 50 346 964 872 299 0.0 276
pORI00000098 100.0 57 0 0 186 242 995 939 1.07e-23 106
pORI00000095 76.312 629 84 50 346 964 872 299 0.0 276
pORI00000095 100.0 57 0 0 186 242 995 939 1.07e-23 106
pORI00000069 76.97 495 77 28 339 819 3703 3232 0.0 248
pORI00000240 80.374 214 25 14 78 288 1257 1058 6.3e-36 147
pORI00000240 86.441 59 5 1 345 403 1057 1002 2.35e-10 62
pORI00000284 85.034 147 10 5 362 497 204 349 1.05e-33 139
pORI00000234 85.034 147 10 5 362 497 204 349 1.05e-33 139
pORI00000210 85.034 147 10 5 362 497 204 349 1.05e-33 139
pORI00000209 85.034 147 10 5 362 497 204 349 1.05e-33 139
pORI00001057 95.082 61 3 0 182 242 700 760 6.43e-21 97
pORI00000947 95.082 61 3 0 182 242 722 782 6.43e-21 97
pORI00000921 89.474 76 8 0 182 257 339 264 6.43e-21 97
pORI00000702 95.082 61 3 0 182 242 700 760 6.43e-21 97
pORI00000446 89.474 76 8 0 182 257 339 264 6.43e-21 97
pORI00000072 95.082 61 3 0 182 242 528 588 6.43e-21 97
pORI00000031 89.474 76 8 0 182 257 534 459 6.43e-21 97
pORI00001164 96.491 57 2 0 186 242 818 874 2.31e-20 95
pORI00001144 90.278 72 7 0 186 257 307 236 2.31e-20 95
pORI00001062 96.491 57 2 0 186 242 592 648 2.31e-20 95
pORI00001056 96.491 57 2 0 186 242 818 874 2.31e-20 95
pORI00001020 90.278 72 7 0 186 257 307 236 2.31e-20 95
pORI00001011 96.491 57 2 0 186 242 818 874 2.31e-20 95
pORI00000834 96.491 57 2 0 186 242 818 874 2.31e-20 95