RefSeq NC_019249
DoriC accession number pORI00000111
OriC length 1022 nt
OriC AT content 0.4638
The location of oriC region 43..1064 nt
Browse in NCBI
OriC map
OriC sequences
AAGTTGTGCTGATGCATCATTTTATAAGCAACTTTTATAAAAAGTTCAAAGGATCTTCTTGAGATCATTCCCTTACAGCCGTAGTCTTCTACTCTAGAAAACGAAAAAACCACCTGGGGAGGTGGTTTTTCGAAGGTTCAGTAAGTTGGGGAACTTCTGAACCGTGGTAACAGTCTTGTGCGAGACATGTCACCAAATCTGTCCTTCTAGTGTAGCCTCAGTAAGGCTGCCACTTCAAGAACTCTCAATACATCTCTCGCACATCCTGTTTACCAGTGGCCGCTGCCAATGGCGTTAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACTGCCTACCCGGAACTGAGTGTCAGGCGTGGAATGAGACGAACGCGGCCATAACAGCGGAATGACACCGGTAAACCGAAAGGCAGGAACAGGAGAGCGCACGAGGGAGCCACCAGGGGGAAACGCCTGGTATCTTTAAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCACCGGCGCGGCCTTTTTTCGGGGCCTCTTTTTTGCTCACATGTTTTTTCTGGTGTTATCCCCTGATTCTGTGGATAACCGTATATCCGTCTTTGCGTGAGCAGACACCGCTCGCCGCAGCCGAACGACCGAGCGCAGCGAGTCAGTGAGCGAGGAAGCGGARAGCGCCGGAAGCTGCATTTCTCCTTACGTATCTGTGCAGCATTTCACACCTCATATGTCGCTGTTCTCTCACCATCTGCTCTGCCGCCTCATAATTAAGCCAGTATACACTCCGTTATCGCTACGTGACTGGGTCATGGCTGCGCCCCGACACCCGCTAAAACCCCCTGACGCGCCCTGACGGGCTTGTCTGCTGACGAAAACGCCCACGGGAAAGCCGTGACCGCCTCCGTCAGCTTCG
AAGTTGTGCTGATGCATCATTTTATAAGCAACTTTTATAAAAAGTTCAAAGGATCTTCTTGAGATCATTCCCTTACAGCCGTAGTCTTCTACTCTAGAAAACGAAAAAACCACCTGGGGAGGTGGTTTTTCGAAGGTTCAGTAAGTTGGGGAACTTCTGAACCGTGGTAACAGTCTTGTGCGAGACATGTCACCAAATCTGTCCTTCTAGTGTAGCCTCAGTAAGGCTGCCACTTCAAGAACTCTCAATACATCTCTCGCACATCCTGTTTACCAGTGGCCGCTGCCAATGGCGTTAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACTGCCTACCCGGAACTGAGTGTCAGGCGTGGAATGAGACGAACGCGGCCATAACAGCGGAATGACACCGGTAAACCGAAAGGCAGGAACAGGAGAGCGCACGAGGGAGCCACCAGGGGGAAACGCCTGGTATCTTTAAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCACCGGCGCGGCCTTTTTTCGGGGCCTCTTTTTTGCTCACATGTTTTTTCTGGTGTTATCCCCTGATTCTGTGGATAACCGTATATCCGTCTTTGCGTGAGCAGACACCGCTCGCCGCAGCCGAACGACCGAGCGCAGCGAGTCAGTGAGCGAGGAAGCGGARAGCGCCGGAAGCTGCATTTCTCCTTACGTATCTGTGCAGCATTTCACACCTCATATGTCGCTGTTCTCTCACCATCTGCTCTGCCGCCTCATAATTAAGCCAGTATACACTCCGTTATCGCTACGTGACTGGGTCATGGCTGCGCCCCGACACCCGCTAAAACCCCCTGACGCGCCCTGACGGGCTTGTCTGCTGACGAAAACGCCCACGGGAAAGCCGTGACCGCCTCCGTCAGCTTCG
AT-rich region
The information of repeat sequences

Motif MRCNGNNWRWCVGDCDKGGMGKVAGMVGAVAGCGCCCRHVGSAGC

StartP-valueSite
7537.90e-16AACGACCGAGCGCAGCGAGTCAGTGAGCGAGGAAGCGGARAGCGCCGGAAGCTGCATTTCTCCTT
6961.06e-15TTCTGTGGATAACCGTATATCCGTCTTTGCGTGAGCAGACACCGCTCGCCGCAGCCGAACGACCG
4121.29e-15GCCTACCCGGAACTGAGTGTCAGGCGTGGAATGAGACGAACGCGGCCATAACAGCGGAATGACAC
4641.88e-15AGCGGAATGACACCGGTAAACCGAAAGGCAGGAACAGGAGAGCGCACGAGGGAGCCACCAGGGGG
9531.11e-13AACCCCCTGACGCGCCCTGACGGGCTTGTCTGCTGACGAAAACGCCCACGGGAAAGCCGTGACCG

Motif TVTGCAASAHHTVTCAMHAVATCTVTCGHTCTTCT

StartP-valueSite
8155.59e-15CTTACGTATCTGTGCAGCATTTCACACCTCATATGTCGCTGTTCTCTCACCATCT
1771.07e-13GTAACAGTCTTGTGCGAGACATGTCACCAAATCTGTCCTTCTAGTGTAGCCTCAG
2322.63e-13TAAGGCTGCCACTTCAAGAACTCTCAATACATCTCTCGCACATCCTGTTTACCAG
251.74e-12CATCATTTTATAAGCAACTTTTATAAAAAGTTCAAAGGATCTTCTTGAGATCATT

Motif GAAAAA

StartP-valueSite
6111.53e-04GGAGCCTATGGAAAAACGCCACCGGC
1031.53e-04TCTAGAAAACGAAAAAACCACCTGGG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000111 100.0 1022 0 0 1 1022 1 1022 0.0 1884
pORI00000320 86.667 885 85 28 166 1022 233 1112 0.0 952
pORI00000312 86.667 885 85 28 166 1022 233 1112 0.0 952
pORI00000058 83.996 1006 112 45 40 1013 1 989 0.0 922
pORI00000022 83.741 1021 110 44 48 1022 8 1018 0.0 917
pORI00000309 85.051 883 89 39 126 976 124 995 0.0 861
pORI00000343 82.6 1023 124 47 40 1022 1009 1 0.0 854
pORI00000012 83.298 946 115 35 101 1013 116 1051 0.0 833
pORI00000112 84.569 823 92 31 166 959 1091 1907 0.0 793
pORI00000315 82.135 946 116 43 99 1013 814 1737 0.0 763
pORI00000306 83.92 796 96 28 251 1019 928 138 0.0 734
pORI00000308 83.086 810 91 42 126 902 124 920 0.0 697
pORI00000060 87.333 600 64 12 48 641 2329 1736 0.0 676
pORI00000060 87.919 149 16 2 872 1019 1534 1387 2.66247e-44 174
pORI00000238 87.167 600 64 13 48 641 259 851 0.0 669
pORI00000238 88.811 143 14 2 872 1013 1053 1194 2.66247e-44 174
pORI00000239 83.824 748 65 32 192 889 819 78 0.0 662
pORI00000094 80.628 924 112 45 47 946 1820 940 0.0 654
pORI00000093 80.628 924 112 45 47 946 904 24 0.0 654
pORI00000301 84.759 643 50 26 192 788 306 946 0.0 603
pORI00000294 84.603 643 51 26 192 788 1005 365 0.0 597
pORI00000292 84.603 643 51 26 192 788 1005 365 0.0 597
pORI00000290 84.603 643 51 26 192 788 996 356 0.0 597
pORI00000224 84.603 643 51 26 192 788 306 946 0.0 597
pORI00000223 84.603 643 51 26 192 788 306 946 0.0 597
pORI00000223 94.118 51 3 0 926 976 1488 1538 2.11e-15 79
pORI00000222 84.603 643 51 26 192 788 306 946 0.0 597
pORI00000097 84.603 643 51 26 192 788 306 946 0.0 597
pORI00000097 94.118 51 3 0 926 976 2008 2058 2.11e-15 79
pORI00000198 86.949 544 53 16 92 626 137 671 0.0 595
pORI00000110 86.949 544 51 18 97 634 2216 2745 0.0 593
pORI00000110 78.333 240 41 8 725 957 2811 3046 5.71e-36 147
pORI00000092 84.268 642 52 27 192 788 306 943 0.0 582
pORI00000092 96.154 52 1 1 738 788 1007 1058 1.26e-17 86
pORI00000092 94.118 51 3 0 926 976 1872 1922 2.11e-15 79
pORI00000244 84.37 595 63 24 52 637 243 816 0.0 556
pORI00000043 85.714 546 51 22 100 635 187 715 0.0 551
pORI00000069 84.656 567 61 18 99 641 3139 3703 0.0 542
pORI00000086 92.973 370 22 4 270 637 745 378 0.0 536
pORI00000056 83.838 594 65 25 50 633 1 573 0.0 536
pORI00000314 85.549 519 61 12 52 562 27 539 0.0 531
pORI00000075 85.549 519 61 12 52 562 27 539 0.0 531
pORI00000061 83.054 596 72 24 55 641 168 743 0.0 514
pORI00000307 82.492 594 76 23 49 634 299 872 0.0 496
pORI00000307 76.604 265 46 16 716 972 929 1185 4.45e-32 134
pORI00000116 82.492 594 76 23 49 634 299 872 0.0 496
pORI00000116 76.604 265 46 16 716 972 929 1185 4.45e-32 134
pORI00000098 82.492 594 76 23 49 634 299 872 0.0 496
pORI00000098 77.083 240 41 14 716 946 929 1163 2.07e-30 128
pORI00000095 82.492 594 76 23 49 634 299 872 0.0 496
pORI00000095 77.083 240 41 14 716 946 929 1163 2.07e-30 128
pORI00000008 76.534 554 87 31 40 555 1651 1103 0.0 263
pORI00000008 87.879 66 6 2 568 632 1049 985 7.6e-15 77
pORI00000240 80.294 340 46 19 680 1013 1058 1382 0.0 237
pORI00000240 88.136 59 4 1 577 635 1002 1057 4.58e-12 68
pORI00000284 87.831 189 12 4 441 618 392 204 0.0 211
pORI00000234 87.831 189 12 4 441 618 392 204 0.0 211
pORI00000210 87.831 189 12 4 441 618 392 204 0.0 211
pORI00000209 87.831 189 12 4 441 618 392 204 0.0 211
pORI00001164 96.667 60 2 0 722 781 878 819 4.51e-22 100
pORI00001144 95.238 63 3 0 719 781 244 306 4.51e-22 100
pORI00001062 96.667 60 2 0 722 781 652 593 4.51e-22 100
pORI00001057 96.667 60 2 0 722 781 764 705 4.51e-22 100
pORI00001056 96.667 60 2 0 722 781 878 819 4.51e-22 100
pORI00001020 95.238 63 3 0 719 781 244 306 4.51e-22 100
pORI00001011 96.667 60 2 0 722 781 878 819 4.51e-22 100
pORI00000947 96.667 60 2 0 722 781 786 727 4.51e-22 100
pORI00000921 95.238 63 3 0 719 781 272 334 4.51e-22 100
pORI00000834 96.667 60 2 0 722 781 878 819 4.51e-22 100
pORI00000702 96.667 60 2 0 722 781 764 705 4.51e-22 100
pORI00000446 95.238 63 3 0 719 781 272 334 4.51e-22 100
pORI00000072 96.667 60 2 0 722 781 592 533 4.51e-22 100
pORI00000031 95.238 63 3 0 719 781 467 529 4.51e-22 100