RefSeq NZ_CP016008
DoriC accession number pORI00000834
OriC length 1385 nt
OriC AT content 0.5877
The location of oriC region 37966..39350 nt
Browse in NCBI
OriC map
OriC sequences
TGTCTATTCCTTAGAACAACCATTCATACACAGAGTATTCTAAAAGGTGGATTATGTAAAGTGGATTTATCCACCTTTATGATTCCACCTTTAAACAAGATATATACCTGCTCTTAGCAGAATATAATCACCTTAATTATCAATATATTATACAGATCAAAACAACGGCACAGCCGTCCACCTTTCACAATTCAGAAAACTCAATTCAAACGGCATACCCATCCACCTTTCGATAAAAAAGCGCCAAGCGCACAAAAAATAGGCGTATGGTTATTTTTCAAATAGTTACGTAGCATGTAACCATGACAACAGTTTGATCTCATTATGAGATCGATATGACGGCAACACCTGACGGCATAGCCATCCACCTTTCACGGCATAACCATCCACCTTTCGCGGCATAGCCATCCACCTTTCACGGCATAGCCATCCACCTTTCGCGGCATGGCCATCCACCTTTCACGGCATAGCCATCCACCTTTCACGTGAGCGTCATGTGAAAAATTACGCGTAATCTACTGAAAATAAAAGACAAAAAATATTGGCATTGATTTTGCAAAAGTATTTTAAGTTTCTAAGATCTTAAAGTAGATCTAAAGATCTACATTTAAGATCTAAAGTTTAATAAGTGTTAGAAGCAAAAAAACACAAAAAATCTGTGGATAACTCAGCCGAAAATTACGCATTCACAATTTCTGTGGATAACTCGTTTTGTTAGCAGAGGACAGATCACTTTGAACCAGAACAGCAGCACTTGAAAACGATGTGCTTATTTTTCAACCACTGCGCGTAAGTGCCTGATGTTAACCCGCCGCAATTCCGCTTCCTCGCTCACTAACTCGCTACGCTCGGTCGTTCGGCTGCGGCGAGCGGTGTCTCCTTTCTCAAAATCTAAAGAAGTCAGATCATACGATCCGTTGATTGATCCTTTTTGGATCTTTCACTGAGAAGCCCTGAATCGCTTTCTGCCGCTTCGTTCGATAAAACCATGAGGAAAACCATGCGAGATCGAAAAAATCACTCAGAATGCGATACAGCACGTTTTAGAGGGTATTCACAAAACAGTCGTTCCCTTGAGGAAATTTTGATCAAGCTTGAACTACTATCCGGATCATGACAACAGATCACAGCAACAAGGCTGCTAAAAAGCGTTGAGAGGCGTTAAACGCCATCAAGACTAGGGCTAGTACAATGGAACGGAAAAAATGCTCAGAATGCGTTACAGAGCGTTTAATCTGATCGTCAAAAAGCCAATTTTTCCTGACCAGAAAGCCAGGTTCTGTCACACAAGGCTCACGTTTTGTCACTTTAAAGAGACATTTTTCTTGATCTGGTGTCACTTATAAGAGACAATGTGCACAGGTTAAGGGAATGAGGGCGGCAAG
TGTCTATTCCTTAGAACAACCATTCATACACAGAGTATTCTAAAAGGTGGATTATGTAAAGTGGATTTATCCACCTTTATGATTCCACCTTTAAACAAGATATATACCTGCTCTTAGCAGAATATAATCACCTTAATTATCAATATATTATACAGATCAAAACAACGGCACAGCCGTCCACCTTTCACAATTCAGAAAACTCAATTCAAACGGCATACCCATCCACCTTTCGATAAAAAAGCGCCAAGCGCACAAAAAATAGGCGTATGGTTATTTTTCAAATAGTTACGTAGCATGTAACCATGACAACAGTTTGATCTCATTATGAGATCGATATGACGGCAACACCTGACGGCATAGCCATCCACCTTTCACGGCATAACCATCCACCTTTCGCGGCATAGCCATCCACCTTTCACGGCATAGCCATCCACCTTTCGCGGCATGGCCATCCACCTTTCACGGCATAGCCATCCACCTTTCACGTGAGCGTCATGTGAAAAATTACGCGTAATCTACTGAAAATAAAAGACAAAAAATATTGGCATTGATTTTGCAAAAGTATTTTAAGTTTCTAAGATCTTAAAGTAGATCTAAAGATCTACATTTAAGATCTAAAGTTTAATAAGTGTTAGAAGCAAAAAAACACAAAAAATCTGTGGATAACTCAGCCGAAAATTACGCATTCACAATTTCTGTGGATAACTCGTTTTGTTAGCAGAGGACAGATCACTTTGAACCAGAACAGCAGCACTTGAAAACGATGTGCTTATTTTTCAACCACTGCGCGTAAGTGCCTGATGTTAACCCGCCGCAATTCCGCTTCCTCGCTCACTAACTCGCTACGCTCGGTCGTTCGGCTGCGGCGAGCGGTGTCTCCTTTCTCAAAATCTAAAGAAGTCAGATCATACGATCCGTTGATTGATCCTTTTTGGATCTTTCACTGAGAAGCCCTGAATCGCTTTCTGCCGCTTCGTTCGATAAAACCATGAGGAAAACCATGCGAGATCGAAAAAATCACTCAGAATGCGATACAGCACGTTTTAGAGGGTATTCACAAAACAGTCGTTCCCTTGAGGAAATTTTGATCAAGCTTGAACTACTATCCGGATCATGACAACAGATCACAGCAACAAGGCTGCTAAAAAGCGTTGAGAGGCGTTAAACGCCATCAAGACTAGGGCTAGTACAATGGAACGGAAAAAATGCTCAGAATGCGTTACAGAGCGTTTAATCTGATCGTCAAAAAGCCAATTTTTCCTGACCAGAAAGCCAGGTTCTGTCACACAAGGCTCACGTTTTGTCACTTTAAAGAGACATTTTTCTTGATCTGGTGTCACTTATAAGAGACAATGTGCACAGGTTAAGGGAATGAGGGCGGCAAG
AT-rich region
The information of repeat sequences

Motif CGGCATAGCCATCCACCTTTCACGRCATARCCATCCACCTT

StartP-valueSite
3971.25e-25CCACCTTTCGCGGCATAGCCATCCACCTTTCACGGCATAGCCATCCACCTTTCGCGGCATG
4414.11e-25CCACCTTTCGCGGCATGGCCATCCACCTTTCACGGCATAGCCATCCACCTTTCACGTGAGC
3531.45e-24CAACACCTGACGGCATAGCCATCCACCTTTCACGGCATAACCATCCACCTTTCGCGGCATA
2116.41e-17TCAATTCAAACGGCATACCCATCCACCTTTCGATAAAAAAGCGCCAAGCGCACAAAAAATA
1668.19e-17ATCAAAACAACGGCACAGCCGTCCACCTTTCACAATTCAGAAAACTCAATTCAAACGGCAT

Motif GAWCGRAAAAAWYRCTCAGAATGCGWTACAGMRCGTTT

StartP-valueSite
11959.66e-22TAGTACAATGGAACGGAAAAAATGCTCAGAATGCGTTACAGAGCGTTTAATCTGATCG
10076.88e-21AACCATGCGAGATCGAAAAAATCACTCAGAATGCGATACAGCACGTTTTAGAGGGTAT

Motif GTGGAT

StartP-valueSite
6981.41e-04CACAATTTCTGTGGATAACTCGTTTT
6591.41e-04CAAAAAATCTGTGGATAACTCAGCCG
611.41e-04ATTATGTAAAGTGGATTTATCCACCT
471.41e-04ATTCTAAAAGGTGGATTATGTAAAGT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000834 100.0 1385 0 0 1 1385 1 1385 0.0 2558
pORI00000834 97.701 87 2 0 397 483 353 439 6.02e-37 150
pORI00000834 97.701 87 2 0 353 439 397 483 6.02e-37 150
pORI00001164 100.0 1124 0 0 1 1124 1 1124 0.0 2076
pORI00001164 97.701 87 2 0 397 483 353 439 6.02e-37 150
pORI00001164 97.701 87 2 0 353 439 397 483 6.02e-37 150
pORI00001056 98.577 1124 16 0 1 1124 1 1124 0.0 1988
pORI00001056 96.552 87 3 0 353 439 397 483 2.8e-35 145
pORI00001056 95.402 87 4 0 397 483 353 439 1.3e-33 139
pORI00001056 97.674 43 1 0 353 395 441 483 3.73e-14 75
pORI00001056 95.349 43 2 0 441 483 353 395 1.73e-12 69
pORI00001020 98.577 1124 16 0 1 1124 1124 1 0.0 1988
pORI00001020 95.556 90 4 0 353 442 728 639 2.8e-35 145
pORI00001020 94.444 90 5 0 397 486 772 683 1.3e-33 139
pORI00001020 95.652 46 2 0 353 398 684 639 3.73e-14 75
pORI00001020 93.478 46 3 0 441 486 772 727 1.73e-12 69
pORI00001011 98.577 1124 16 0 1 1124 1 1124 0.0 1988
pORI00001011 96.552 87 3 0 353 439 397 483 2.8e-35 145
pORI00001011 95.402 87 4 0 397 483 353 439 1.3e-33 139
pORI00001011 97.674 43 1 0 353 395 441 483 3.73e-14 75
pORI00001011 95.349 43 2 0 441 483 353 395 1.73e-12 69
pORI00001144 98.489 1125 16 1 1 1124 1125 1 0.0 1982
pORI00001144 95.556 90 4 0 353 442 728 639 2.8e-35 145
pORI00001144 94.444 90 5 0 397 486 772 683 1.3e-33 139
pORI00001144 95.652 46 2 0 353 398 684 639 3.73e-14 75
pORI00001144 93.478 46 3 0 441 486 772 727 1.73e-12 69
pORI00000702 82.46 878 118 24 377 1232 254 1117 0.0 736
pORI00000421 85.411 706 90 12 534 1232 815 116 0.0 721
pORI00000031 82.245 873 118 27 383 1232 974 116 0.0 719
pORI00001057 82.55 808 107 27 355 1151 254 1038 0.0 680
pORI00000921 82.828 792 100 23 383 1151 779 1 0.0 676
pORI00001062 90.73 507 45 2 721 1226 495 1000 0.0 675
pORI00001062 97.674 86 2 0 1300 1385 1020 1105 2.17e-36 148
pORI00000947 82.217 821 110 22 355 1151 254 1062 0.0 675
pORI00000446 87.565 579 65 5 577 1151 576 1 0.0 664
pORI00000072 89.126 515 50 5 721 1232 435 946 0.0 636
pORI00000990 87.961 515 58 4 721 1232 771 258 0.0 604
pORI00000999 90.338 414 35 5 816 1226 517 106 0.0 538
pORI00000999 97.674 86 2 0 1300 1385 86 1 2.17e-36 148
pORI00000578 90.338 414 35 5 816 1226 517 106 0.0 538
pORI00000578 97.674 86 2 0 1300 1385 86 1 2.17e-36 148
pORI00000343 93.151 73 5 0 818 890 244 316 3.67e-24 108
pORI00000308 95.455 66 3 0 809 874 808 743 1.32e-23 106
pORI00000914 92.958 71 3 1 817 887 710 642 1.71e-22 102
pORI00000595 92.958 71 3 1 817 887 710 642 1.71e-22 102
pORI00000478 92.958 71 3 1 817 887 354 286 1.71e-22 102
pORI00000094 98.276 58 1 0 817 874 1107 1164 1.71e-22 102
pORI00000093 98.276 58 1 0 817 874 191 248 1.71e-22 102
pORI00000320 91.667 72 6 0 818 889 870 799 6.15e-22 100
pORI00000315 91.667 72 6 0 818 889 1503 1432 6.15e-22 100
pORI00000312 91.667 72 6 0 818 889 870 799 6.15e-22 100
pORI00000309 91.667 72 6 0 818 889 799 728 6.15e-22 100
pORI00000111 95.238 63 3 0 819 881 781 719 6.15e-22 100
pORI00000307 96.61 59 2 0 817 875 996 938 2.21e-21 99
pORI00000116 96.61 59 2 0 817 875 996 938 2.21e-21 99
pORI00000110 96.61 59 2 0 817 875 2869 2811 2.21e-21 99
pORI00000098 96.61 59 2 0 817 875 996 938 2.21e-21 99
pORI00000095 96.61 59 2 0 817 875 996 938 2.21e-21 99
pORI00000301 90.278 72 7 0 818 889 939 868 2.86e-20 95
pORI00000294 96.491 57 2 0 818 874 372 428 2.86e-20 95
pORI00000292 96.491 57 2 0 818 874 372 428 2.86e-20 95
pORI00000290 96.491 57 2 0 818 874 363 419 2.86e-20 95
pORI00000239 96.491 57 2 0 818 874 186 242 2.86e-20 95
pORI00000224 90.278 72 7 0 818 889 939 868 2.86e-20 95
pORI00000223 90.278 72 7 0 818 889 939 868 2.86e-20 95
pORI00000222 90.278 72 7 0 818 889 939 868 2.86e-20 95
pORI00000097 90.278 72 7 0 818 889 939 868 2.86e-20 95
pORI00000058 90.278 72 7 0 818 889 756 685 2.86e-20 95
pORI00000240 92.424 66 3 2 825 890 1151 1088 1.03e-19 94
pORI00000092 86.957 69 8 1 821 889 935 868 1.04e-14 77