RefSeq NC_025025
DoriC accession number pORI00000301
OriC length 1814 nt
OriC AT content 0.4609
The location of oriC region 990..2803 nt
Browse in NCBI
OriC map
OriC sequences
CTGTCAGACCAAGTTTACTCATATATACTTTAGATTGATTTAAAACTTCATTTTTAATTTAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAGATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGCTCGCCGCAGCCGAACGACCGAGCGCAGCGAGTCAGTGAGCGAGGAAGCGGAAGAGCGCCCAATACGCAAACCGCCTCTCCCCGCGCGTTGGCCGATTCATTAATGCAGCTGGCACGACAGGTTTCCCGACTGGAAAGCGGGCAGTGAGCGCAACGCAATTAATGTGAGTTAGCTCACTCATTAGGCACCCCAGGCTTTACACTTTATGCTTCCGGCTCGTATGTTGTGTGGAATTGTGAGCGGATAACAATTTCACACAGGAAACAGCTATGACCATGATTACGCCAAGCGCGCAATTAACCCTCACTAAAGGGAACAAAAGCTGGAGCTCCACCGCGGTGGCGGCCGCTCTAGAACTAGAGTCGACCACCAAGGGCACCATCTCTGCTTGGGCCACCCCGTTGGCCGCAGCCAGCTCGCTGAGAGCCGTGAACGACAGGGCGAACGCCAGCCCGCCGACGGCGAGGGTTCCGACCGCTGCAACTCCCGGTGCAACCTTGTCCCGGTCTATTCTCTTCACTGCACCAGCTCCAATCTGGTGTGAATGCCCCTCGTCTGTTCGCGCAGGCGGGGGGCTCTATTCGTTTGTCAGCATCGAAAGTAGCCAGATCAGGGATGCGTTGCAACCGCGTATGCCCAGGTCAGAAGAGTCGCACAAGAGTTGCAGACCCCTGGAAAGAAAAATGGCCAGAGGGCGAAAACACCCTCTGACCAGCGGAGCGGGCGACGGGAATCGAACCCGCGTAGCTAGTTTGGAAGAATGGGTGTCTGCCGACCACATATGGGCCGGTCAAGATAGGTTTTTACCCCCTCTCGGCTGCATCCTCTAAGTGGAAAGAAATTGCAGGTCGTAGAAGCGCGTTGAAGCCTGAGAGTTGCACAGGAGTTGCAACCCGGTAGCCTTGTTCACGACGAGAGGAGACCTAG
CTGTCAGACCAAGTTTACTCATATATACTTTAGATTGATTTAAAACTTCATTTTTAATTTAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAGATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGCTCGCCGCAGCCGAACGACCGAGCGCAGCGAGTCAGTGAGCGAGGAAGCGGAAGAGCGCCCAATACGCAAACCGCCTCTCCCCGCGCGTTGGCCGATTCATTAATGCAGCTGGCACGACAGGTTTCCCGACTGGAAAGCGGGCAGTGAGCGCAACGCAATTAATGTGAGTTAGCTCACTCATTAGGCACCCCAGGCTTTACACTTTATGCTTCCGGCTCGTATGTTGTGTGGAATTGTGAGCGGATAACAATTTCACACAGGAAACAGCTATGACCATGATTACGCCAAGCGCGCAATTAACCCTCACTAAAGGGAACAAAAGCTGGAGCTCCACCGCGGTGGCGGCCGCTCTAGAACTAGAGTCGACCACCAAGGGCACCATCTCTGCTTGGGCCACCCCGTTGGCCGCAGCCAGCTCGCTGAGAGCCGTGAACGACAGGGCGAACGCCAGCCCGCCGACGGCGAGGGTTCCGACCGCTGCAACTCCCGGTGCAACCTTGTCCCGGTCTATTCTCTTCACTGCACCAGCTCCAATCTGGTGTGAATGCCCCTCGTCTGTTCGCGCAGGCGGGGGGCTCTATTCGTTTGTCAGCATCGAAAGTAGCCAGATCAGGGATGCGTTGCAACCGCGTATGCCCAGGTCAGAAGAGTCGCACAAGAGTTGCAGACCCCTGGAAAGAAAAATGGCCAGAGGGCGAAAACACCCTCTGACCAGCGGAGCGGGCGACGGGAATCGAACCCGCGTAGCTAGTTTGGAAGAATGGGTGTCTGCCGACCACATATGGGCCGGTCAAGATAGGTTTTTACCCCCTCTCGGCTGCATCCTCTAAGTGGAAAGAAATTGCAGGTCGTAGAAGCGCGTTGAAGCCTGAGAGTTGCACAGGAGTTGCAACCCGGTAGCCTTGTTCACGACGAGAGGAGACCTAG
AT-rich region
The information of repeat sequences

Motif TCRTATNTAVTTTRGAAKDAT

StartP-valueSite
195.38e-11CCAAGTTTACTCATATATACTTTAGATTGATTTAAAACTTC
482.72e-10ATTTAAAACTTCATTTTTAATTTAAAAGGATCTAGGTGAAG
16291.04e-09AATCGAACCCGCGTAGCTAGTTTGGAAGAATGGGTGTCTGC
11041.75e-09TGCTTCCGGCTCGTATGTTGTGTGGAATTGTGAGCGGATAA

Motif CCTTTTK

StartP-valueSite
7763.96e-05AGCAACGCGGCCTTTTTACGGTTCCTG
1783.96e-05TTCTTGAGATCCTTTTTTTCTGCGCGT
813.96e-05AGGTGAAGATCCTTTTTGATAATCTCA
8058.77e-05CTTTTGCTGGCCTTTTGCTCACATGTT
7948.77e-05CGGTTCCTGGCCTTTTGCTGGCCTTTT

Motif AAGAGTTGCA

StartP-valueSite
15448.51e-07AGAGTCGCACAAGAGTTGCAGACCCCTGGA
17692.62e-06AGAGTTGCACAGGAGTTGCAACCCGGTAGC
17584.54e-06GTTGAAGCCTGAGAGTTGCACAGGAGTTGC
15335.57e-06CCCAGGTCAGAAGAGTCGCACAAGAGTTGC
15037.37e-06CAGATCAGGGATGCGTTGCAACCGCGTATG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000301 100.0 1814 0 0 1 1814 1 1814 0.0 3350
pORI00000222 99.915 1177 1 0 1 1177 1 1177 0.0 2169
pORI00000223 99.829 1171 1 1 1 1171 1 1170 0.0 2150
pORI00000097 99.829 1171 1 1 1 1171 1 1170 0.0 2150
pORI00000224 99.904 1038 1 0 1 1038 1 1038 0.0 1912
pORI00000294 99.899 995 1 0 1 995 1310 316 0.0 1832
pORI00000292 99.899 995 1 0 1 995 1310 316 0.0 1832
pORI00000290 99.899 995 1 0 1 995 1301 307 0.0 1832
pORI00000092 99.206 1008 2 6 1 1008 1 1002 0.0 1812
pORI00000092 100.0 277 0 0 895 1171 1007 1283 0.0 512
pORI00000239 100.0 946 0 0 1 946 1124 179 0.0 1748
pORI00000306 94.022 803 31 9 148 946 1160 371 0.0 1201
pORI00000320 92.965 796 31 15 151 944 103 875 0.0 1136
pORI00000312 92.965 796 31 15 151 944 103 875 0.0 1136
pORI00000112 91.476 786 40 17 164 946 974 1735 0.0 1061
pORI00000022 90.29 793 54 15 160 946 8 783 0.0 1016
pORI00000012 87.562 804 63 26 148 946 55 826 0.0 896
pORI00000343 87.141 801 71 20 148 943 1013 240 0.0 880
pORI00000058 87.359 799 61 28 152 946 1 763 0.0 880
pORI00000315 93.478 552 23 6 396 946 971 1510 0.0 808
pORI00000309 93.091 550 23 9 398 946 271 806 0.0 791
pORI00000308 92.727 550 25 9 398 946 271 806 0.0 780
pORI00000111 84.759 643 50 26 306 946 192 788 0.0 603
pORI00000008 81.462 561 80 22 152 700 1651 1103 0.0 438
pORI00000094 80.943 488 57 25 279 763 1702 1248 0.0 353
pORI00000094 98.276 58 1 0 882 939 1165 1108 2.24e-22 102
pORI00000093 80.943 488 57 25 279 763 786 332 0.0 353
pORI00000093 98.276 58 1 0 882 939 249 192 2.24e-22 102
pORI00000198 80.769 494 53 30 278 765 209 666 0.0 348
pORI00000086 83.375 397 43 19 388 782 753 378 0.0 346
pORI00000043 83.505 388 41 17 396 780 348 715 0.0 340
pORI00000060 77.414 642 91 40 160 791 2329 1732 0.0 333
pORI00000060 100.0 147 0 0 1 147 1 147 0.0 272
pORI00000060 100.0 34 0 0 115 148 3368 3335 1.06e-10 64
pORI00000110 82.741 394 46 18 388 779 2372 2745 0.0 331
pORI00000110 100.0 57 0 0 883 939 2812 2868 1.73e-23 106
pORI00000244 83.243 370 40 16 396 763 448 797 0.0 320
pORI00000061 82.188 393 47 17 396 786 372 743 0.0 316
pORI00000056 82.385 369 46 15 396 763 208 558 0.0 303
pORI00000307 76.312 629 84 50 161 779 299 872 0.0 276
pORI00000307 100.0 57 0 0 883 939 939 995 1.73e-23 106
pORI00000116 76.312 629 84 50 161 779 299 872 0.0 276
pORI00000116 100.0 57 0 0 883 939 939 995 1.73e-23 106
pORI00000098 76.312 629 84 50 161 779 299 872 0.0 276
pORI00000098 100.0 57 0 0 883 939 939 995 1.73e-23 106
pORI00000095 76.312 629 84 50 161 779 299 872 0.0 276
pORI00000095 100.0 57 0 0 883 939 939 995 1.73e-23 106
pORI00000069 76.97 495 77 28 306 786 3232 3703 0.0 248
pORI00000284 85.034 147 10 5 628 763 349 204 1.71e-33 139
pORI00000234 85.034 147 10 5 628 763 349 204 1.71e-33 139
pORI00000210 85.034 147 10 5 628 763 349 204 1.71e-33 139
pORI00000209 85.034 147 10 5 628 763 349 204 1.71e-33 139
pORI00001057 95.082 61 3 0 883 943 760 700 1.04e-20 97
pORI00000947 95.082 61 3 0 883 943 782 722 1.04e-20 97
pORI00000921 89.474 76 8 0 868 943 264 339 1.04e-20 97
pORI00000702 95.082 61 3 0 883 943 760 700 1.04e-20 97
pORI00000446 89.474 76 8 0 868 943 264 339 1.04e-20 97
pORI00000072 95.082 61 3 0 883 943 588 528 1.04e-20 97
pORI00000031 89.474 76 8 0 868 943 459 534 1.04e-20 97
pORI00001164 96.491 57 2 0 883 939 874 818 3.75e-20 95
pORI00001144 90.278 72 7 0 868 939 236 307 3.75e-20 95
pORI00001062 96.491 57 2 0 883 939 648 592 3.75e-20 95
pORI00001056 96.491 57 2 0 883 939 874 818 3.75e-20 95
pORI00001020 90.278 72 7 0 868 939 236 307 3.75e-20 95
pORI00001011 96.491 57 2 0 883 939 874 818 3.75e-20 95
pORI00000834 96.491 57 2 0 883 939 874 818 3.75e-20 95
pORI00000240 81.818 110 15 4 837 946 1058 1162 6.28e-18 88
pORI00000240 86.441 59 5 1 722 780 1002 1057 3.81e-10 62