RefSeq NC_015175
DoriC accession number pORI00000069
OriC length 4082 nt
OriC AT content 0.5216
The location of oriC region 1028..5109 nt
Browse in NCBI
OriC map
OriC sequences
TGCAGCGGCATGAAATGGCGGTGGCCGCCGAACGGGCATACGAGCAGCGACAGCACGAAAAAGAGCTTGCGGAAACCCGTTCCCGTCAGCGGAGCTATAACGGTCCGACGCTGGGCTGACTGAGCGCATCCAGTGACAACCCGCACGAAGAAGGGCTCATAAATTTCCCGCTAAATACGGTCGTGATGAAAACATCACGGCGTATACAACGGAGGGATTATGAGACTGTTTAACGTGATTGAGACGGTGCTGAACTGCCTGTACATGGCGCTGGAGATCTGGGACTGGCTGGAGAAGCATTTTCCTGTTTTTAAGGCGTTCATCCTGATTCTGGCCTGAAATCAGACCGTATGCATCTGGCTGCATGACCATGCAGCCGGGTAAAATTTATCTGTCACGAACGGGGCGGTGTATCGGGTGGTTTGTTGCCGGTTTTACCTGACTGCCGCCCCGTTTGTGGCGAACCTGTCCGGAGCGGTGCGGGCAAGGGATGTTATGGTAAATATCTTCGAGCTTCAGGTACAAAAAAAGCCCCGGAGGGCTCTCAATCATTTGATTCCGAAACGGTCACCTTTAGTGTCCGTTCTGACAATCAATTGCCATTTGATTGCTTGTAGCTGACTGTGCTGATGATGGTTTTGCGGCGGGAACGGGTCGCTGCCGTTACTGGTGATCTCTTTTCCGCAGACGGTACATCGATAAATTCCAGAATGGGGAACGCTGTCTCCTGGATTATATCGTGACTTCCACCATGTTTGATCGCTACTGACGCTTTGTAAAAACTTCTCTGTTTCGCTGGTATATGCAGCCATTTAGCTTTCCTTTTCTGAATTTATAGGGCAGAGATAGAAAAGCCGCCCGCAGGGGCGGCTTTTCGTTGCCAGTCTAAATATCAAGCATATTGGGTTAACATCCAGGTTACAGCCTTTCCTGCGTACGGAGGCATTACATTACCTTTTGCGTATCGGGGCTGTAGTGGAAGGGGTTCCTACGACTTTCCAGACACCACTTTCAGGACACTTTTGTCCGGTAGAAGCAGTAGTACCAATTGGTGCTTTAGACATGCTAATTCCTCTTTTTGTGTTTTGTCTGTATTGCTGCTTGTGTAGCGATACAGATGTTTAGTTTAGAAATTAGCTTTCAACAGGGAGGTGTTGTCATTTTCTCGAAATGTGATGCTGAACACCTTTTGTACAGTGATGTGTACGCTTTTGCTGTCGGAGTTTTTGGTTCGGTGATCGGGTGTCATGGTAAATAACACTTAATCATTACAACGTAGCCATTAAAGGTTGTGGCGAAGCCTTCTGTAAAAGGCCTAGCTCTTCTTTTTCCGCGTTCCTTCCGCTTGTTTCTTCTCTGGTAGAATGTGCGGATTCTGCCATCCGGATATTGAGGTTTTTTTCGTGAACATTGATGAAGTTGCTAAGTGGCGTCCTTTTACGGATCAGGATGGCAATATATGGGATTTGTCATTTCTTGATGCACATGAGGTTTCTTATACTCATTGTTCTCCTGGTAAACCTGACATTGTGTACAAGTTCACTGTTTCTTACTCATTTCATTGTTTTTGCAAGGATTATCCAGAGCAGACTGAGGAAGAAAAATTATCGTTGATGTATGATGCAGGCAAAGACTCGAGGCCATTTTGTAAGATCCGATATGCTCTTGCTCGAGATAAGCTGAGAGCTATCATTGAAGGATTGGGGAACGCGAAGGTTATCCATGCTGGCTATGGTAGTTATGCTGTTGTAGAGATTACGGTGAATGAAGGTGAAAGTGAGTTCTACTTTGTGCCTTTTAAGGTATATCGTGAGCGTAAAAAGCTAGCGCCTTCATGTAACAAGTGCTTATCCTGTCAATGAGAGACCGTCAGGTAAGCCTGTTAGCTTTTTCAAGATAGCTCACAATCTCCTGCGCGGGAAACCATTACCTAAACCCCATATGTAACAAAGCCCGCTTAGTTGCGGCTTCGCCAGAAATTTCTTCTGGTATTCAGAACACCTTTACCGGGCTTGGCCTCGACCAACATTGCTGTTGGTAGTGGGATGTCTGGTATTACCAGTCTGCTGCATCCTTGAAGCAATTGTAGGTAGAGTGATGTAGATTTGCAACCAACATTTTGGTTGAACCTATATACTAACTTTTCTCGATGCCTCCCCAATCCCTTGCTGTATCTGGCTTTCTTGAAATAGCCGACTAAAGAGCACCTAAAACCTAACTGTACATTCTGCCCCCTATATTGCTGGGCAGATACCCCAGCATATGTAAACCGGCGGCTGCAAATGTCCTGCCGGTGGGTTGTCTATATGCTGGCTGTCATGTGGTCTGTTTTAGGTATACTATCCAGAGTAAACACATAAATTTCATGGCAGGTATGCAGTGAGTAAGCAGGGGCAGAATCTACTCAATCTTACACAGGCTGCTGAGGCTGTAGGTATCACAAGAAAAACACTTTACTCCCATATTGATAAGGGGTTGGTAAGTGTTACCCGTCAGCAAGGTAAACGATATATCGATGTGTCCGAGCTAATCAGACATTACGGATCTGTATCCTTACCAGAGGGAAAAGTAAACGCCGTTACACGGTCACAAAATAAACATGATGACGATACAATCTTGGCTATGCAGCGGGAGCTGGTCCGAGCTTGAGGAAGCTCATCGAGAAGCAACAATTGTTGCTTGAGGATAAACAGGAGGCGGACCGGCTTCGGGAACAGGTGGTCGGGTTGCAAAATGAGCGTGACGCAACAGCTCAGAAACTGGAAAAAGTGAAAGCAGAGCTGGAAGCTACGCGGAATAATGGCTTTTGGAAACGCTTATTTGGTTGATGATATGACTATACAAAATTTTCGCATAGGCTTTGAACGCATCGTTTTTCTGGGATTGTTATTTTTTGTAGTTAACGCGGTGCTATTCTTTGGCATCACCCTTTTCGATCCTGAATGGAAAGCATGGCAGCGAGATTGGGCGCTTAAGTGCTTAATTATTTTCGCTGAAATAATGATCTCTAGTCAGGTTCTACTTTGGGTAGCTTATGGCTTTGCAGGGAAACCGTTTAAGCCTAACTTTAATCCGTTAACATATGTGCATCGGCTTTAATTAATTTGACGGCGTTGCTACACCGGTGCATTATCCCTGAAACGAAAAAACCACCCGGCAAGGTGGTTTTTCGAAGGTTCAGCAAACCGGCAAGTTTCTGAACCGTGGTAACAGTCTTGTGCGAGACGTGTCACCAAATACTGTCCTTCCAGTGTAGCCGCAGTCAGGCAACCACATCAAGAATCTTTTAACTGAGATTCTGTCGATACTACCTCGCACATTTCTGTTTACCGTATTGGCTGTTGCCATTAGCGGCACTTTGCCGTGTCTGTTGGGGTTGGAATCGTGAGAATAGTTACCCAGCAGGTGCAACGGTCGGACTGAACGGGGGGTTCGTGCATACAGTCCAGCTTGGAGCGAACTGCCTACCCGGAACTGAGTGTCAGGCGTGGAATGAGATAAACGCGGCCATAACAGCGGAATGACACCGGTAAACCGAAAGGCAGGAACAGGAGAGCGCACGAGGGAGCCATCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCACTGATTTGAGCGTCAGATTTCGTGATGCTTGTCAGGGGGGCGGAGCCTATGGAAAAACGGCAACTCCGCATCCTTTTTCCGGCCTTTCTTGACCTCAGCTTCATCTCGTTACCTCGTCATTCGTGAGCAGGTAACGCCCGCCGCAGCCGAACGGCCGGAGCGTAGCGACCGAGTGAGCGAGGAGGCGTCATATCTCCTGAACCGGCATTCAGCACTGACGCGTCTCAGCCGCATATTTTCTCCTGCTACATGAAGCACTTTCCTGATAACCGCACTCATGCCAACATAGTAAGCCAGTATACACTCCGCTAGCGCTACGTGACTGGTTCAGGGCTGCGCCCCGAAACCCGCTAAAAACCACTGACGCGCCTGCGGCTTGTCCAACACCGTGCCGACCGGGAAACATTTCCCGCCCGTCCCGGTGTTCTCAGGAGGCTACTCTGGCAGACAAACGCAACAAG
TGCAGCGGCATGAAATGGCGGTGGCCGCCGAACGGGCATACGAGCAGCGACAGCACGAAAAAGAGCTTGCGGAAACCCGTTCCCGTCAGCGGAGCTATAACGGTCCGACGCTGGGCTGACTGAGCGCATCCAGTGACAACCCGCACGAAGAAGGGCTCATAAATTTCCCGCTAAATACGGTCGTGATGAAAACATCACGGCGTATACAACGGAGGGATTATGAGACTGTTTAACGTGATTGAGACGGTGCTGAACTGCCTGTACATGGCGCTGGAGATCTGGGACTGGCTGGAGAAGCATTTTCCTGTTTTTAAGGCGTTCATCCTGATTCTGGCCTGAAATCAGACCGTATGCATCTGGCTGCATGACCATGCAGCCGGGTAAAATTTATCTGTCACGAACGGGGCGGTGTATCGGGTGGTTTGTTGCCGGTTTTACCTGACTGCCGCCCCGTTTGTGGCGAACCTGTCCGGAGCGGTGCGGGCAAGGGATGTTATGGTAAATATCTTCGAGCTTCAGGTACAAAAAAAGCCCCGGAGGGCTCTCAATCATTTGATTCCGAAACGGTCACCTTTAGTGTCCGTTCTGACAATCAATTGCCATTTGATTGCTTGTAGCTGACTGTGCTGATGATGGTTTTGCGGCGGGAACGGGTCGCTGCCGTTACTGGTGATCTCTTTTCCGCAGACGGTACATCGATAAATTCCAGAATGGGGAACGCTGTCTCCTGGATTATATCGTGACTTCCACCATGTTTGATCGCTACTGACGCTTTGTAAAAACTTCTCTGTTTCGCTGGTATATGCAGCCATTTAGCTTTCCTTTTCTGAATTTATAGGGCAGAGATAGAAAAGCCGCCCGCAGGGGCGGCTTTTCGTTGCCAGTCTAAATATCAAGCATATTGGGTTAACATCCAGGTTACAGCCTTTCCTGCGTACGGAGGCATTACATTACCTTTTGCGTATCGGGGCTGTAGTGGAAGGGGTTCCTACGACTTTCCAGACACCACTTTCAGGACACTTTTGTCCGGTAGAAGCAGTAGTACCAATTGGTGCTTTAGACATGCTAATTCCTCTTTTTGTGTTTTGTCTGTATTGCTGCTTGTGTAGCGATACAGATGTTTAGTTTAGAAATTAGCTTTCAACAGGGAGGTGTTGTCATTTTCTCGAAATGTGATGCTGAACACCTTTTGTACAGTGATGTGTACGCTTTTGCTGTCGGAGTTTTTGGTTCGGTGATCGGGTGTCATGGTAAATAACACTTAATCATTACAACGTAGCCATTAAAGGTTGTGGCGAAGCCTTCTGTAAAAGGCCTAGCTCTTCTTTTTCCGCGTTCCTTCCGCTTGTTTCTTCTCTGGTAGAATGTGCGGATTCTGCCATCCGGATATTGAGGTTTTTTTCGTGAACATTGATGAAGTTGCTAAGTGGCGTCCTTTTACGGATCAGGATGGCAATATATGGGATTTGTCATTTCTTGATGCACATGAGGTTTCTTATACTCATTGTTCTCCTGGTAAACCTGACATTGTGTACAAGTTCACTGTTTCTTACTCATTTCATTGTTTTTGCAAGGATTATCCAGAGCAGACTGAGGAAGAAAAATTATCGTTGATGTATGATGCAGGCAAAGACTCGAGGCCATTTTGTAAGATCCGATATGCTCTTGCTCGAGATAAGCTGAGAGCTATCATTGAAGGATTGGGGAACGCGAAGGTTATCCATGCTGGCTATGGTAGTTATGCTGTTGTAGAGATTACGGTGAATGAAGGTGAAAGTGAGTTCTACTTTGTGCCTTTTAAGGTATATCGTGAGCGTAAAAAGCTAGCGCCTTCATGTAACAAGTGCTTATCCTGTCAATGAGAGACCGTCAGGTAAGCCTGTTAGCTTTTTCAAGATAGCTCACAATCTCCTGCGCGGGAAACCATTACCTAAACCCCATATGTAACAAAGCCCGCTTAGTTGCGGCTTCGCCAGAAATTTCTTCTGGTATTCAGAACACCTTTACCGGGCTTGGCCTCGACCAACATTGCTGTTGGTAGTGGGATGTCTGGTATTACCAGTCTGCTGCATCCTTGAAGCAATTGTAGGTAGAGTGATGTAGATTTGCAACCAACATTTTGGTTGAACCTATATACTAACTTTTCTCGATGCCTCCCCAATCCCTTGCTGTATCTGGCTTTCTTGAAATAGCCGACTAAAGAGCACCTAAAACCTAACTGTACATTCTGCCCCCTATATTGCTGGGCAGATACCCCAGCATATGTAAACCGGCGGCTGCAAATGTCCTGCCGGTGGGTTGTCTATATGCTGGCTGTCATGTGGTCTGTTTTAGGTATACTATCCAGAGTAAACACATAAATTTCATGGCAGGTATGCAGTGAGTAAGCAGGGGCAGAATCTACTCAATCTTACACAGGCTGCTGAGGCTGTAGGTATCACAAGAAAAACACTTTACTCCCATATTGATAAGGGGTTGGTAAGTGTTACCCGTCAGCAAGGTAAACGATATATCGATGTGTCCGAGCTAATCAGACATTACGGATCTGTATCCTTACCAGAGGGAAAAGTAAACGCCGTTACACGGTCACAAAATAAACATGATGACGATACAATCTTGGCTATGCAGCGGGAGCTGGTCCGAGCTTGAGGAAGCTCATCGAGAAGCAACAATTGTTGCTTGAGGATAAACAGGAGGCGGACCGGCTTCGGGAACAGGTGGTCGGGTTGCAAAATGAGCGTGACGCAACAGCTCAGAAACTGGAAAAAGTGAAAGCAGAGCTGGAAGCTACGCGGAATAATGGCTTTTGGAAACGCTTATTTGGTTGATGATATGACTATACAAAATTTTCGCATAGGCTTTGAACGCATCGTTTTTCTGGGATTGTTATTTTTTGTAGTTAACGCGGTGCTATTCTTTGGCATCACCCTTTTCGATCCTGAATGGAAAGCATGGCAGCGAGATTGGGCGCTTAAGTGCTTAATTATTTTCGCTGAAATAATGATCTCTAGTCAGGTTCTACTTTGGGTAGCTTATGGCTTTGCAGGGAAACCGTTTAAGCCTAACTTTAATCCGTTAACATATGTGCATCGGCTTTAATTAATTTGACGGCGTTGCTACACCGGTGCATTATCCCTGAAACGAAAAAACCACCCGGCAAGGTGGTTTTTCGAAGGTTCAGCAAACCGGCAAGTTTCTGAACCGTGGTAACAGTCTTGTGCGAGACGTGTCACCAAATACTGTCCTTCCAGTGTAGCCGCAGTCAGGCAACCACATCAAGAATCTTTTAACTGAGATTCTGTCGATACTACCTCGCACATTTCTGTTTACCGTATTGGCTGTTGCCATTAGCGGCACTTTGCCGTGTCTGTTGGGGTTGGAATCGTGAGAATAGTTACCCAGCAGGTGCAACGGTCGGACTGAACGGGGGGTTCGTGCATACAGTCCAGCTTGGAGCGAACTGCCTACCCGGAACTGAGTGTCAGGCGTGGAATGAGATAAACGCGGCCATAACAGCGGAATGACACCGGTAAACCGAAAGGCAGGAACAGGAGAGCGCACGAGGGAGCCATCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCACTGATTTGAGCGTCAGATTTCGTGATGCTTGTCAGGGGGGCGGAGCCTATGGAAAAACGGCAACTCCGCATCCTTTTTCCGGCCTTTCTTGACCTCAGCTTCATCTCGTTACCTCGTCATTCGTGAGCAGGTAACGCCCGCCGCAGCCGAACGGCCGGAGCGTAGCGACCGAGTGAGCGAGGAGGCGTCATATCTCCTGAACCGGCATTCAGCACTGACGCGTCTCAGCCGCATATTTTCTCCTGCTACATGAAGCACTTTCCTGATAACCGCACTCATGCCAACATAGTAAGCCAGTATACACTCCGCTAGCGCTACGTGACTGGTTCAGGGCTGCGCCCCGAAACCCGCTAAAAACCACTGACGCGCCTGCGGCTTGTCCAACACCGTGCCGACCGGGAAACATTTCCCGCCCGTCCCGGTGTTCTCAGGAGGCTACTCTGGCAGACAAACGCAACAAG
AT-rich region
The information of repeat sequences

Motif AGVTANAAMVGHCBGACGCDVSGGBGGCTTNKCGHABMCAGTSHMRA

StartP-valueSite
932.74e-19CCGTCAGCGGAGCTATAACGGTCCGACGCTGGGCTGACTGAGCGCATCCAGTGACAACCCGCACGAA
8442.29e-18TATAGGGCAGAGATAGAAAAGCCGCCCGCAGGGGCGGCTTTTCGTTGCCAGTCTAAATATCAAGCAT
34049.14e-18GTTACCCAGCAGGTGCAACGGTCGGACTGAACGGGGGGTTCGTGCATACAGTCCAGCTTGGAGCGAA
39702.07e-17CCCCGAAACCCGCTAAAAACCACTGACGCGCCTGCGGCTTGTCCAACACCGTGCCGACCGGGAAACA

Motif CATCCTGDTTMCVGCCTTDVHTGHBNHCRKHDGCATCWCDTTRCC

StartP-valueSite
36901.22e-19GGCAACTCCGCATCCTTTTTCCGGCCTTTCTTGACCTCAGCTTCATCTCGTTACCTCGTCATTCG
9118.16e-19ATTGGGTTAACATCCAGGTTACAGCCTTTCCTGCGTACGGAGGCATTACATTACCTTTTGCGTAT
3214.76e-17TTAAGGCGTTCATCCTGATTCTGGCCTGAAATCAGACCGTATGCATCTGGCTGCATGACCATGCA
33191.21e-15TACCTCGCACATTTCTGTTTACCGTATTGGCTGTTGCCATTAGCGGCACTTTGCCGTGTCTGTTG

Motif CGGRAAACCDTTMCC

StartP-valueSite
19177.29e-09ATCTCCTGCGCGGGAAACCATTACCTAAACCCCAT
40181.66e-08CCGTGCCGACCGGGAAACATTTCCCGCCCGTCCCG
702.05e-08AAAGAGCTTGCGGAAACCCGTTCCCGTCAGCGGAG
19944.05e-08TTCTGGTATTCAGAACACCTTTACCGGGCTTGGCC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000069 100.0 4082 0 0 1 4082 1 4082 0.0 7539
pORI00000086 90.771 726 51 13 3362 4082 715 1 0.0 955
pORI00000061 87.011 716 75 17 3374 4081 415 1120 0.0 791
pORI00000060 83.087 881 103 34 3136 4002 2283 1435 0.0 760
pORI00000110 81.921 968 105 52 3139 4082 2218 3139 0.0 754
pORI00000238 82.86 881 104 35 3136 4002 305 1152 0.0 747
pORI00000244 85.077 650 83 14 3336 3980 456 1096 0.0 651
pORI00000094 80.871 873 106 44 3136 3983 1773 937 0.0 630
pORI00000093 80.871 873 106 44 3136 3983 857 21 0.0 630
pORI00000334 78.953 974 128 56 3139 4077 937 6 0.0 592
pORI00000322 78.85 974 129 56 3139 4077 937 6 0.0 586
pORI00000307 82.827 658 92 19 3363 4006 539 1189 0.0 569
pORI00000116 82.827 658 92 19 3363 4006 539 1189 0.0 569
pORI00000111 84.656 567 61 18 3139 3703 99 641 0.0 542
pORI00000098 82.595 632 89 19 3363 3980 539 1163 0.0 538
pORI00000095 82.595 632 89 19 3363 3980 539 1163 0.0 538
pORI00000198 84.545 550 56 21 3136 3680 139 664 0.0 518
pORI00000043 86.25 480 50 11 3336 3808 356 826 0.0 507
pORI00000056 85.507 483 48 17 3336 3808 216 686 0.0 484
pORI00000314 80.769 494 69 19 3135 3624 68 539 0.0 363
pORI00000314 83.483 333 43 10 3654 3980 606 932 0.0 300
pORI00000075 80.769 494 69 19 3135 3624 68 539 0.0 363
pORI00000075 83.483 333 43 10 3654 3980 606 932 0.0 300
pORI00000022 77.029 579 82 40 3135 3680 51 611 0.0 285
pORI00000200 76.263 594 92 35 3136 3709 152 716 0.0 270
pORI00000320 77.465 497 71 26 3232 3708 259 734 0.0 259
pORI00000312 77.465 497 71 26 3232 3708 259 734 0.0 259
pORI00000301 76.97 495 77 28 3232 3703 306 786 0.0 248
pORI00000294 76.97 495 77 28 3232 3703 1005 525 0.0 248
pORI00000292 76.97 495 77 28 3232 3703 1005 525 0.0 248
pORI00000290 76.97 495 77 28 3232 3703 996 516 0.0 248
pORI00000239 76.97 495 77 28 3232 3703 819 339 0.0 248
pORI00000012 75.685 584 91 38 3141 3699 116 673 0.0 244
pORI00000224 76.768 495 78 28 3232 3703 306 786 0.0 243
pORI00000223 76.768 495 78 28 3232 3703 306 786 0.0 243
pORI00000222 76.768 495 78 28 3232 3703 306 786 0.0 243
pORI00000097 76.768 495 78 28 3232 3703 306 786 0.0 243
pORI00000092 76.768 495 78 28 3232 3703 306 786 0.0 243
pORI00000112 76.923 468 68 24 3232 3680 1117 1563 0.0 231
pORI00000309 80.368 326 43 16 3374 3680 312 635 0.0 228
pORI00000306 76.433 471 78 25 3232 3680 1002 543 0.0 224
pORI00000308 80.061 326 44 16 3374 3680 312 635 0.0 222
pORI00000315 79.228 337 50 15 3363 3680 1003 1338 0.0 217
pORI00000284 86.911 191 13 6 3502 3681 392 203 0.0 204
pORI00000234 86.911 191 13 6 3502 3681 392 203 0.0 204
pORI00000210 86.911 191 13 6 3502 3681 392 203 0.0 204
pORI00000209 86.911 191 13 6 3502 3681 392 203 0.0 204
pORI00000240 87.931 116 9 5 3891 4002 1226 1340 6.47e-31 132
pORI00000008 90.476 63 4 2 3756 3818 911 851 6.61e-16 82
pORI00000286 95.833 48 0 2 3138 3184 703 657 3.08e-14 77