RefSeq NC_005018
DoriC accession number pORI00000022
OriC length 2029 nt
OriC AT content 0.483
The location of oriC region 1..2029 nt
Browse in NCBI
OriC map
OriC sequences
AAAACTAAAAGGATCTCTTGAGATCCTTTTTTTCTGCGCGTAATCTTGGACCTGTAAACGAAAAAACCACCCTGGCAGGTGGTTTTTTCGAAGGTTAGCTAATCCTGGCAGATTATCTAACCGAGGTAATCTGGCTTCAGCAGAGCACAGATACCAAATACTGTCCTTCCAGTGTAGCCGTAGTTAGGCCATCACTTCAAGAACTCTGTAAGCATCTGGATAAATCCTCGCTCTGCTAATCCGGTTACCAGTGGCTGCTGCCAGTGGCGTTAAGGCGTGTCTTACTGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGGGCCGAGATACCAACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCCCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCGGCGCGGCCTTTTGTTGCCCTTTGCCTTTTTACGCACATGTTCTTTCCGGCCTTATCCCCTGATTCTGTGGATAACCGTATTTCCGCCTTTGAGTGAGCCGGCACCGCTTGCCGCAGCCGAACGACCGAGCGCAGCGAGTCAGTGAGCGAGGAAGCGGAAGAGCGCCTGATGCGGTATGTTCTCCTTACGCATCTGTGCGGCATTTCACACCCGGCATGGCGTGCTTTTCATACAATCCGCACTGATGCCGCATAGTTAAGCCAGTATACACTCCGCTATCGCTACGTGACTGGGTCATGGCTGCGCCCCGACACCCGCTAAAACCCCCTGACGCGCCCTGACGGGCTTGTCTGCTGACGAAAACGCCCACGGGAAAGCCGTGACCGCCTCCGTCAGCTTCGTTATGTTCCTGTTTCACTTTCGGCCTCAAAGCGAATCTGGATGCTGTTCTGGAGTTCTTCTGCGAGTTCGTGCAGTCGTTCGCACATGGCCGCCTGTTCGTCGGCATCCAGAGCATCCAGTTTTTCAAGCAGTGTCAGGCTCTGGCTTTTGATAAATCGCGCCATATTCAGCGCAGTTTGTTGTTGTTTGTTCACCTTCCTTTGTTCTCCGTCAGTTCCGGGTGTCGGGGGGACCCTGAGCAGGTGGTAATTGTAAGACGTTGCGGGCGACGGTATTACAATTGCACATCCTGTCCTGTTTCTTTAGGACGTATCATGGCACAGCATATCAACTGATAAATAATCCCTGTGCAGTGCAGCCGCTGTTGCATAAAATTTCGCTCTGCGTCGAGTGTTTCTTAATCAATAATTCCGCTGATACTCCGGAAAAACGCGAGTCTGTTCTCATGCCTGAAATGCCCACACCCCACGCAAAAACAAGTTTTTGCTGATTTTTCTTTATAAATAGAGAGTTATGACAAATTAGTTCTTCTTGCTCTCTTTGTGATATTTAAAAAAGCGGTGTCGGCGCGGTGTTGTAGCTGCGCCAACACCGCTTTTTAGGGGTGGTACTGACTATTTTCATAAAAAACATCATCTTATATTAGGGGTGCTGCTAGCGGCGCGGTGTGTTTTTTTACAGGACACCCCTGGGGGCGCTGCTAGGGGTGTCTGTTCAGATATGTAGCAATGAGTCAGGGATTCACGAACTGAAAATGTCCGAAAATGTGTCTCATGGGCACTGTATGCGCCCAAACCGATCGTCATTCACTTTCATGCATAGCTATGCAGTGAGCTGAAAGCGATCCTGACGCATTTTTCCGGTTTACCCCGGGGAGAACATCTCTTTTTGCGGTGTTCGCGGCAGAATGCTTTCAGCGCGTTTTAGCGGTGCGCGCAATGCGACGTTATGGTAAATCCATATGGGGGGGGAATTGGATTCTGGGCCGCATTGTGTCCTCATGACTTAGT
AAAACTAAAAGGATCTCTTGAGATCCTTTTTTTCTGCGCGTAATCTTGGACCTGTAAACGAAAAAACCACCCTGGCAGGTGGTTTTTTCGAAGGTTAGCTAATCCTGGCAGATTATCTAACCGAGGTAATCTGGCTTCAGCAGAGCACAGATACCAAATACTGTCCTTCCAGTGTAGCCGTAGTTAGGCCATCACTTCAAGAACTCTGTAAGCATCTGGATAAATCCTCGCTCTGCTAATCCGGTTACCAGTGGCTGCTGCCAGTGGCGTTAAGGCGTGTCTTACTGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGGGCCGAGATACCAACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCCCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCGGCGCGGCCTTTTGTTGCCCTTTGCCTTTTTACGCACATGTTCTTTCCGGCCTTATCCCCTGATTCTGTGGATAACCGTATTTCCGCCTTTGAGTGAGCCGGCACCGCTTGCCGCAGCCGAACGACCGAGCGCAGCGAGTCAGTGAGCGAGGAAGCGGAAGAGCGCCTGATGCGGTATGTTCTCCTTACGCATCTGTGCGGCATTTCACACCCGGCATGGCGTGCTTTTCATACAATCCGCACTGATGCCGCATAGTTAAGCCAGTATACACTCCGCTATCGCTACGTGACTGGGTCATGGCTGCGCCCCGACACCCGCTAAAACCCCCTGACGCGCCCTGACGGGCTTGTCTGCTGACGAAAACGCCCACGGGAAAGCCGTGACCGCCTCCGTCAGCTTCGTTATGTTCCTGTTTCACTTTCGGCCTCAAAGCGAATCTGGATGCTGTTCTGGAGTTCTTCTGCGAGTTCGTGCAGTCGTTCGCACATGGCCGCCTGTTCGTCGGCATCCAGAGCATCCAGTTTTTCAAGCAGTGTCAGGCTCTGGCTTTTGATAAATCGCGCCATATTCAGCGCAGTTTGTTGTTGTTTGTTCACCTTCCTTTGTTCTCCGTCAGTTCCGGGTGTCGGGGGGACCCTGAGCAGGTGGTAATTGTAAGACGTTGCGGGCGACGGTATTACAATTGCACATCCTGTCCTGTTTCTTTAGGACGTATCATGGCACAGCATATCAACTGATAAATAATCCCTGTGCAGTGCAGCCGCTGTTGCATAAAATTTCGCTCTGCGTCGAGTGTTTCTTAATCAATAATTCCGCTGATACTCCGGAAAAACGCGAGTCTGTTCTCATGCCTGAAATGCCCACACCCCACGCAAAAACAAGTTTTTGCTGATTTTTCTTTATAAATAGAGAGTTATGACAAATTAGTTCTTCTTGCTCTCTTTGTGATATTTAAAAAAGCGGTGTCGGCGCGGTGTTGTAGCTGCGCCAACACCGCTTTTTAGGGGTGGTACTGACTATTTTCATAAAAAACATCATCTTATATTAGGGGTGCTGCTAGCGGCGCGGTGTGTTTTTTTACAGGACACCCCTGGGGGCGCTGCTAGGGGTGTCTGTTCAGATATGTAGCAATGAGTCAGGGATTCACGAACTGAAAATGTCCGAAAATGTGTCTCATGGGCACTGTATGCGCCCAAACCGATCGTCATTCACTTTCATGCATAGCTATGCAGTGAGCTGAAAGCGATCCTGACGCATTTTTCCGGTTTACCCCGGGGAGAACATCTCTTTTTGCGGTGTTCGCGGCAGAATGCTTTCAGCGCGTTTTAGCGGTGCGCGCAATGCGACGTTATGGTAAATCCATATGGGGGGGGAATTGGATTCTGGGCCGCATTGTGTCCTCATGACTTAGT
AT-rich region
The information of repeat sequences

Motif SCSCNGABHCYVBGGAAAAMC

StartP-valueSite
14303.51e-11ATCAATAATTCCGCTGATACTCCGGAAAAACGCGAGTCTGT
14762.03e-09TGCCTGAAATGCCCACACCCCACGCAAAAACAAGTTTTTGC
5902.22e-09CTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCGGCG
6736.11e-09CCGGCCTTATCCCCTGATTCTGTGGATAACCGTATTTCCGC
9228.31e-09TCATGGCTGCGCCCCGACACCCGCTAAAACCCCCTGACGCG

Motif AAAAAA

StartP-valueSite
16449.88e-05CTATTTTCATAAAAAACATCATCTTA
15719.88e-05TGTGATATTTAAAAAAGCGGTGTCGG
619.88e-05CCTGTAAACGAAAAAACCACCCTGGC

Motif TGVGCTCAAAGCGA

StartP-valueSite
18501.01e-07AGCTATGCAGTGAGCTGAAAGCGATCCTGACGCA
18051.50e-07GGGCACTGTATGCGCCCAAACCGATCGTCATTCA
19502.61e-07GTTTTAGCGGTGCGCGCAATGCGACGTTATGGTA
10393.00e-07GTTTCACTTTCGGCCTCAAAGCGAATCTGGATGC
2914.84e-07CTTACTGGGTTGGACTCAAGACGATAGTTACCGG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000022 100.0 2029 0 0 1 2029 1 2029 0.0 3747
pORI00000320 91.15 1017 66 18 9 1018 113 1112 0.0 1358
pORI00000312 91.15 1017 66 18 9 1018 113 1112 0.0 1358
pORI00000306 89.096 1018 94 15 8 1015 1148 138 0.0 1249
pORI00000012 89.232 1003 82 19 12 1009 70 1051 0.0 1230
pORI00000343 87.671 1022 94 25 8 1018 1001 1 0.0 1160
pORI00000058 84.45 1209 149 31 8 1207 9 1187 0.0 1155
pORI00000112 88.458 953 82 22 12 955 974 1907 0.0 1134
pORI00000239 89.855 897 63 20 8 885 965 78 0.0 1127
pORI00000309 88.353 953 83 23 27 972 64 995 0.0 1120
pORI00000315 92.109 773 52 8 242 1009 969 1737 0.0 1081
pORI00000301 90.29 793 54 15 8 783 160 946 0.0 1016
pORI00000294 90.164 793 55 15 8 783 1151 365 0.0 1011
pORI00000292 90.164 793 55 15 8 783 1151 365 0.0 1011
pORI00000290 90.164 793 55 15 8 783 1142 356 0.0 1011
pORI00000224 90.164 793 55 15 8 783 160 946 0.0 1011
pORI00000223 90.164 793 55 15 8 783 160 946 0.0 1011
pORI00000223 94.118 51 3 0 922 972 1488 1538 4.23e-15 79
pORI00000222 90.164 793 55 15 8 783 160 946 0.0 1011
pORI00000097 90.164 793 55 15 8 783 160 946 0.0 1011
pORI00000097 94.118 51 3 0 922 972 2008 2058 4.23e-15 79
pORI00000092 89.66 793 56 18 8 783 160 943 0.0 987
pORI00000092 100.0 52 0 0 732 783 1007 1058 1.17e-20 97
pORI00000092 94.118 51 3 0 922 972 1872 1922 4.23e-15 79
pORI00000308 86.689 879 88 24 27 898 64 920 0.0 948
pORI00000111 83.741 1021 110 44 8 1018 48 1022 0.0 917
pORI00000008 83.091 550 75 17 8 548 1643 1103 0.0 484
pORI00000110 76.096 912 127 67 53 953 2215 3046 0.0 392
pORI00000094 78.323 632 88 38 5 627 1823 1232 0.0 363
pORI00000093 78.323 632 88 38 5 627 907 316 0.0 363
pORI00000198 79.335 571 66 38 52 613 139 666 0.0 353
pORI00000060 77.937 630 92 35 7 629 2330 1741 0.0 350
pORI00000060 88.591 149 15 2 868 1015 1534 1387 1.4013e-45 180
pORI00000086 82.63 403 47 20 236 636 753 372 0.0 335
pORI00000061 77.939 621 78 45 16 629 170 738 0.0 333
pORI00000043 82.687 387 46 18 244 628 348 715 0.0 324
pORI00000240 83.573 347 42 12 664 1009 1050 1382 0.0 311
pORI00000240 88.136 59 4 3 570 628 1002 1057 9.17e-12 68
pORI00000244 82.703 370 42 17 244 611 448 797 0.0 309
pORI00000056 77.047 623 87 42 10 626 1 573 0.0 307
pORI00000069 77.029 579 82 40 51 611 3135 3680 0.0 285
pORI00000307 75.637 628 90 50 9 627 299 872 0.0 254
pORI00000307 77.736 265 45 13 710 968 929 1185 8.85e-37 150
pORI00000116 75.637 628 90 50 9 627 299 872 0.0 254
pORI00000116 77.736 265 45 13 710 968 929 1185 8.85e-37 150
pORI00000098 75.637 628 90 50 9 627 299 872 0.0 254
pORI00000098 78.333 240 40 11 710 942 929 1163 4.12e-35 145
pORI00000095 75.637 628 90 50 9 627 299 872 0.0 254
pORI00000095 78.333 240 40 11 710 942 929 1163 4.12e-35 145
pORI00000322 75.296 591 102 31 56 629 937 374 0.0 243
pORI00000334 75.127 591 103 31 56 629 937 374 0.0 237
pORI00000238 89.51 143 13 2 868 1009 1053 1194 1.4013e-45 180
pORI00000284 84.354 147 11 5 476 611 349 204 8.91e-32 134
pORI00000234 84.354 147 11 5 476 611 349 204 8.91e-32 134
pORI00000210 84.354 147 11 5 476 611 349 204 8.91e-32 134
pORI00000209 84.354 147 11 5 476 611 349 204 8.91e-32 134
pORI00000181 96.667 60 2 0 874 933 784 725 9.04e-22 100
pORI00000124 93.548 62 2 1 874 933 783 844 5.44e-19 92
pORI00000011 93.333 60 3 1 874 933 784 842 7.04e-18 88