RefSeq NC_010796
DoriC accession number pORI00000061
OriC length 1121 nt
OriC AT content 0.4862
The location of oriC region 1072..2192 nt
Browse in NCBI
OriC map
OriC sequences
TTGTATATCACCTTATGCATCCGTTTACTTTGTTTGTATATTGTATCATTTGTTTGTTTTTTGTTGTTTTTTTTGTGCTTTTTGTGCTTTTTGTGCTTTTTGTGCTTATGTCGTTGGGGCTGGGCGGGGGCGAAAATCTGGAAAGCGAATCAGATCTTTGTGAGAACCTTCTTGAGATCCTTTTTTTCTCGTCGTAATCTTATGGTCAGTAAACGAAAAAACCGCCCAGCAAGGCGGTTTTTTCGAAGGTTCTTAGAGCAGCAACTCTTTGAAACCGCGGTAACTGGCTTGGAGGAGCGCAGTCACCAAAACATGTCCTTTCAGTTTAGCCTTAACTGGCTCATAACTTCAAGACTAACTCCTCTAAATCAGTTACCAGTGGCTGCTGCCAGTGGTGCTTTTGCATGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCAGTCGGACTGAACGGGGGGTTCGTGCATACAGTCCAGCTTGGAGCGAACTGCCTTCCCGGAACCGAGTGTCAGGCGTGGAATGAGAAACCGCGGCCACAACAGCGGAATGACACCGGCAAACCGGATGGCAGGAACAGGAGAGCGCACGAGGGAGCCACCAGGGGGAAACGCCTGGTATCTTTAAGTCCTGTCGGGTTTCGCCACCACTGATTTGAGCGTCAGATTTCGTGATGCTTGTCAGGGGGGCGGAGCCTATGGAAAAACGGCAACGCCGCATCCTTTTTCCGGCCCTTACTGATCCCTCGCTATTCCGTCATCCTGTTCTCCGTGAGTCGGTAACGCCCGCCGCAGCCTCATGACCGAACGTAGTGAGCGAATGAGCGAGGAGGCGTAATTTCATATGTCCGTGCATGCTATTGCGGACGCTCCTGAACTACATATCACACCTGTCACATGAAGCACTTTCCTGATTACAGCACTCATGCCAACATATTAAGCCAGTATACACTCCGCTAGCGCTACGTGACTGGTTCAGGGCTGCGCCCCGAAACCCGCCAAAAGCCACTGACGCGCCTGCGGCTTGTCCAACACCGCGCCGATCGGGAAAGTATTTCCCGCCCGTCCCGGCGTTATCAGGAGGCCTGATTGGCAGATAAACGCAGCAAA
TTGTATATCACCTTATGCATCCGTTTACTTTGTTTGTATATTGTATCATTTGTTTGTTTTTTGTTGTTTTTTTTGTGCTTTTTGTGCTTTTTGTGCTTTTTGTGCTTATGTCGTTGGGGCTGGGCGGGGGCGAAAATCTGGAAAGCGAATCAGATCTTTGTGAGAACCTTCTTGAGATCCTTTTTTTCTCGTCGTAATCTTATGGTCAGTAAACGAAAAAACCGCCCAGCAAGGCGGTTTTTTCGAAGGTTCTTAGAGCAGCAACTCTTTGAAACCGCGGTAACTGGCTTGGAGGAGCGCAGTCACCAAAACATGTCCTTTCAGTTTAGCCTTAACTGGCTCATAACTTCAAGACTAACTCCTCTAAATCAGTTACCAGTGGCTGCTGCCAGTGGTGCTTTTGCATGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCAGTCGGACTGAACGGGGGGTTCGTGCATACAGTCCAGCTTGGAGCGAACTGCCTTCCCGGAACCGAGTGTCAGGCGTGGAATGAGAAACCGCGGCCACAACAGCGGAATGACACCGGCAAACCGGATGGCAGGAACAGGAGAGCGCACGAGGGAGCCACCAGGGGGAAACGCCTGGTATCTTTAAGTCCTGTCGGGTTTCGCCACCACTGATTTGAGCGTCAGATTTCGTGATGCTTGTCAGGGGGGCGGAGCCTATGGAAAAACGGCAACGCCGCATCCTTTTTCCGGCCCTTACTGATCCCTCGCTATTCCGTCATCCTGTTCTCCGTGAGTCGGTAACGCCCGCCGCAGCCTCATGACCGAACGTAGTGAGCGAATGAGCGAGGAGGCGTAATTTCATATGTCCGTGCATGCTATTGCGGACGCTCCTGAACTACATATCACACCTGTCACATGAAGCACTTTCCTGATTACAGCACTCATGCCAACATATTAAGCCAGTATACACTCCGCTAGCGCTACGTGACTGGTTCAGGGCTGCGCCCCGAAACCCGCCAAAAGCCACTGACGCGCCTGCGGCTTGTCCAACACCGCGCCGATCGGGAAAGTATTTCCCGCCCGTCCCGGCGTTATCAGGAGGCCTGATTGGCAGATAAACGCAGCAAA
AT-rich region
The information of repeat sequences

Motif AAMCGCGGCAA

StartP-valueSite
11109.28e-07ATTGGCAGATAAACGCAGCAAA
2732.47e-06AACTCTTTGAAACCGCGGTAACTGGCTTGGA
5412.68e-06TGGAATGAGAAACCGCGGCCACAACAGCGGA
7142.92e-06GAGCCTATGGAAAAACGGCAACGCCGCATCC
10034.08e-06CTGCGCCCCGAAACCCGCCAAAAGCCACTGA

Motif AGTNAVCGAAWVA

StartP-valueSite
2089.02e-08TCTTATGGTCAGTAAACGAAAAAACCGCCCAGC
8237.33e-07GACCGAACGTAGTGAGCGAATGAGCGAGGAGGC
4341.57e-06TCAAGACGATAGTTACCGGATAAGGCGCAGCAG
3011.73e-06GGAGGAGCGCAGTCACCAAAACATGTCCTTTCA
1402.72e-06GCGAAAATCTGGAAAGCGAATCAGATCTTTGTG

Motif AMTRMCWYCBSBRAAYCRRDTRBCAG

StartP-valueSite
5611.48e-12ACAACAGCGGAATGACACCGGCAAACCGGATGGCAGGAACAGGAGA
3544.04e-12TAACTTCAAGACTAACTCCTCTAAATCAGTTACCAGTGGCTGCTGC
5028.52e-12CTTGGAGCGAACTGCCTTCCCGGAACCGAGTGTCAGGCGTGGAATG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000061 100.0 1121 0 0 1 1121 1 1121 0.0 2071
pORI00000086 86.369 917 95 29 217 1120 901 2 0.0 974
pORI00000110 84.316 950 114 27 188 1114 2195 3132 0.0 896
pORI00000244 85.899 851 104 15 168 1010 246 1088 0.0 893
pORI00000307 84.081 892 120 20 168 1044 305 1189 0.0 841
pORI00000116 84.081 892 120 20 168 1044 305 1189 0.0 841
pORI00000098 83.916 858 116 20 168 1010 305 1155 0.0 800
pORI00000095 83.916 858 116 20 168 1010 305 1155 0.0 800
pORI00000069 87.011 716 75 17 415 1120 3374 4081 0.0 791
pORI00000056 91.203 557 45 4 168 722 6 560 0.0 754
pORI00000060 81.527 904 120 35 168 1040 2322 1435 0.0 701
pORI00000043 90.299 536 42 10 193 722 169 700 0.0 693
pORI00000238 81.305 904 121 36 168 1040 266 1152 0.0 689
pORI00000094 80.678 885 115 39 168 1013 1812 945 0.0 636
pORI00000093 80.678 885 115 39 168 1013 896 29 0.0 636
pORI00000198 85.714 546 52 21 194 720 126 664 0.0 553
pORI00000315 84.973 559 55 21 205 741 808 1359 0.0 540
pORI00000111 83.054 596 72 24 168 743 55 641 0.0 514
pORI00000334 78.893 777 125 24 365 1121 758 1 0.0 490
pORI00000322 78.893 777 125 24 365 1121 758 1 0.0 490
pORI00000314 80.62 516 75 20 168 664 30 539 0.0 375
pORI00000314 81.173 324 49 11 694 1010 606 924 0.0 250
pORI00000075 80.62 516 75 20 168 664 30 539 0.0 375
pORI00000075 81.173 324 49 11 694 1010 606 924 0.0 250
pORI00000320 78.871 620 78 41 170 745 121 731 0.0 370
pORI00000312 78.871 620 78 41 170 745 121 731 0.0 370
pORI00000058 79.287 589 74 33 168 720 16 592 0.0 368
pORI00000112 77.85 614 90 37 168 741 977 1584 0.0 340
pORI00000022 77.974 622 76 46 170 738 16 629 0.0 333
pORI00000309 82.821 390 44 18 374 743 271 657 0.0 327
pORI00000308 82.564 390 45 18 374 743 271 657 0.0 322
pORI00000012 77.759 598 81 35 163 720 69 654 0.0 320
pORI00000301 82.188 393 47 17 372 743 396 786 0.0 316
pORI00000294 82.188 393 47 17 372 743 915 525 0.0 316
pORI00000292 82.188 393 47 17 372 743 915 525 0.0 316
pORI00000290 82.188 393 47 17 372 743 906 516 0.0 316
pORI00000239 82.188 393 47 17 372 743 729 339 0.0 316
pORI00000224 82.188 393 47 17 372 743 396 786 0.0 316
pORI00000223 82.188 393 47 17 372 743 396 786 0.0 316
pORI00000222 82.188 393 47 17 372 743 396 786 0.0 316
pORI00000097 82.188 393 47 17 372 743 396 786 0.0 316
pORI00000092 82.188 393 47 17 372 743 396 786 0.0 316
pORI00000343 77.534 592 83 35 168 718 994 412 0.0 311
pORI00000306 82.609 368 45 14 372 720 910 543 0.0 307
pORI00000284 85.185 189 17 5 544 721 391 203 0.0 183
pORI00000234 85.185 189 17 5 544 721 391 203 0.0 183
pORI00000210 85.185 189 17 5 544 721 391 203 0.0 183
pORI00000209 85.185 189 17 5 544 721 391 203 0.0 183
pORI00000240 100.0 29 0 0 692 720 1015 1043 3.92e-08 55