RefSeq NC_025157
DoriC accession number pORI00000306
OriC length 1341 nt
OriC AT content 0.4899
The location of oriC region 1556..1213 nt
Browse in NCBI
OriC map
OriC sequences
ATCCCTAACACCTCATTTATAGTATTAAGTTTATTCTTATCAATATAGGAGCATAGAATTCCTGTAACAATAGCAATACCCCAAATACCTAATGTAGTTCCAGCAAGCAAGCTAAAAAGTAAAGCAACGACACATGCAGCTCCCGGAGACGGTCACAGCTTGTCTGTGAGCGGATGCCGGGAGCTGACAAGCCCGTCAGGGCGCGTCAGCAGGTTTTAGCGGGTGTCGGGGCGCAGCCCTGACCCAGTCACGTAGCGATAGCGGAGTGTATACTGGCTTAACCATGCGGCATCAGTGCGGATTGTATGAAAAGTACGCCATGCCGGGTGTGAAATGCCGCACAGATGCGTAAGGAGAAAATGCACGTCCAGGCGCTTTTCCGCTTCCTCGCTCACTGACTCGCTACGCTCGGTCGTTCGACTGCGGCGAGCGGTACTGACTCACACAAAAACGGTAACACAGTTATCCACAGAATCAGGGGATAAGGCCGGAAAGAACATGTGAGCAAAAGACCAGGAACAGGAAGAAGGCCACGTAGCAGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATAGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTTGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGGCACGCCTTAACGCCACTGGCAGCAGCCACTGGTAACCGGATTAGCAGAGCGATGATGGCACAAACGGTGCTACAGAGTTCTTGAAGTAGTGGCCCGACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGTTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATCTCAAGAAGATCCTTTAATCTTTTCTACTGAACCGCGATCCCCGTCAGTTTAGAAGAGGAGGATGGTGCGATGGTCCCTCCCTGAACATCACGTATATAGTTAGCCTGACATCCAACAAGGAGGTTTATCGCGAATATTCCCACAAAAAATCTTTTCCTCATAACTCGATCCTTATAAAATGAAAAGAATATATGGCGAGGTTTAATTT
ATCCCTAACACCTCATTTATAGTATTAAGTTTATTCTTATCAATATAGGAGCATAGAATTCCTGTAACAATAGCAATACCCCAAATACCTAATGTAGTTCCAGCAAGCAAGCTAAAAAGTAAAGCAACGACACATGCAGCTCCCGGAGACGGTCACAGCTTGTCTGTGAGCGGATGCCGGGAGCTGACAAGCCCGTCAGGGCGCGTCAGCAGGTTTTAGCGGGTGTCGGGGCGCAGCCCTGACCCAGTCACGTAGCGATAGCGGAGTGTATACTGGCTTAACCATGCGGCATCAGTGCGGATTGTATGAAAAGTACGCCATGCCGGGTGTGAAATGCCGCACAGATGCGTAAGGAGAAAATGCACGTCCAGGCGCTTTTCCGCTTCCTCGCTCACTGACTCGCTACGCTCGGTCGTTCGACTGCGGCGAGCGGTACTGACTCACACAAAAACGGTAACACAGTTATCCACAGAATCAGGGGATAAGGCCGGAAAGAACATGTGAGCAAAAGACCAGGAACAGGAAGAAGGCCACGTAGCAGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATAGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTTGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGGCACGCCTTAACGCCACTGGCAGCAGCCACTGGTAACCGGATTAGCAGAGCGATGATGGCACAAACGGTGCTACAGAGTTCTTGAAGTAGTGGCCCGACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGTTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATCTCAAGAAGATCCTTTAATCTTTTCTACTGAACCGCGATCCCCGTCAGTTTAGAAGAGGAGGATGGTGCGATGGTCCCTCCCTGAACATCACGTATATAGTTAGCCTGACATCCAACAAGGAGGTTTATCGCGAATATTCCCACAAAAAATCTTTTCCTCATAACTCGATCCTTATAAAATGAAAAGAATATATGGCGAGGTTTAATTT

AT-rich region
The information of repeat sequences

Motif CCAGGCGBTTTHYC

StartP-valueSite
3689.88e-09AAATGCACGTCCAGGCGCTTTTCCGCTTCCTCGC
5387.75e-08AGGCCACGTAGCAGGCGTTTTTCCATAGGCTCCG
6341.66e-07TATAAAGATACCAGGCGTTTCCCCCTGGAAGCTC
7275.90e-07CTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACG
12491.55e-06TGACATCCAACAAGGAGGTTTATCGCGAATATTC

Motif GTTGGTAKCT

StartP-valueSite
7536.33e-07AGCTCACGCTGTTGGTATCTCAGTTCGGTG
10421.33e-06CGGAAAAAGAGTTGGTAGCTCTTGATCCGG
9971.91e-06AAGGACAGTATTTGGTATCTGCGCTCTGCT
10753.99e-06ACAAACCACCGTTGGTAGCGGTGGTTTTTT

Motif TTTWWTSTTWKCWA

StartP-valueSite
301.42e-08TAGTATTAAGTTTATTCTTATCAATATAGGAGCA
11463.07e-08AAGAAGATCCTTTAATCTTTTCTACTGAACCGCG
10906.25e-08TAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATT

The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000306 100.0 1341 0 0 1 1341 1 1341 0.0 2477
pORI00000112 93.006 958 46 15 199 1152 1907 967 0.0 1387
pORI00000320 91.292 1022 67 16 144 1161 1103 100 0.0 1375
pORI00000312 91.292 1022 67 16 144 1161 1103 100 0.0 1375
pORI00000239 92.629 909 41 17 269 1160 78 977 0.0 1284
pORI00000022 89.229 1012 92 16 144 1148 1009 8 0.0 1249
pORI00000012 88.91 1037 81 29 131 1160 1064 55 0.0 1247
pORI00000058 88.674 1033 83 28 129 1156 1004 1 0.0 1229
pORI00000301 94.022 803 31 9 371 1160 946 148 0.0 1201
pORI00000294 94.022 803 31 9 371 1160 365 1163 0.0 1201
pORI00000292 94.022 803 31 9 371 1160 365 1163 0.0 1201
pORI00000290 94.022 803 31 9 371 1160 356 1154 0.0 1201
pORI00000343 87.535 1059 105 22 138 1189 4 1042 0.0 1199
pORI00000224 93.898 803 32 9 371 1160 946 148 0.0 1195
pORI00000223 93.898 803 32 9 371 1160 946 148 0.0 1195
pORI00000223 95.192 104 5 0 129 232 1591 1488 2.07995e-41 165
pORI00000222 93.898 803 32 9 371 1160 946 148 0.0 1195
pORI00000097 93.898 803 32 9 371 1160 946 148 0.0 1195
pORI00000097 95.192 104 5 0 129 232 2111 2008 2.07995e-41 165
pORI00000092 93.695 793 32 10 381 1160 935 148 0.0 1171
pORI00000092 95.192 104 5 0 129 232 1975 1872 2.07995e-41 165
pORI00000315 93.503 785 43 8 132 912 1749 969 0.0 1160
pORI00000309 93.598 781 42 8 131 908 1046 271 0.0 1158
pORI00000308 93.293 656 35 9 256 908 920 271 0.0 959
pORI00000111 84.051 790 94 28 144 928 1013 251 0.0 734
pORI00000240 91.061 358 16 13 134 490 1392 1050 0.0 470
pORI00000240 92.857 42 3 0 543 584 1043 1002 2.81e-10 62
pORI00000008 81.383 564 77 22 606 1156 1103 1651 0.0 435
pORI00000094 76.877 826 122 49 211 1029 939 1702 0.0 403
pORI00000093 76.877 826 122 49 211 1029 23 786 0.0 403
pORI00000086 82.979 376 45 16 543 918 397 753 0.0 322
pORI00000043 82.552 384 50 14 527 910 714 348 0.0 322
pORI00000198 79.472 492 65 25 541 1030 666 209 0.0 316
pORI00000244 82.88 368 45 13 543 910 797 448 0.0 315
pORI00000056 82.88 368 46 14 543 910 558 208 0.0 315
pORI00000110 81.633 392 54 15 527 918 2745 2372 0.0 309
pORI00000061 82.609 368 45 14 543 910 720 372 0.0 307
pORI00000060 76.423 615 98 32 540 1148 1756 2329 0.0 289
pORI00000060 95.425 153 7 0 129 281 1378 1530 0.0 244
pORI00000307 79.275 386 58 19 527 910 872 507 0.0 250
pORI00000116 79.275 386 58 19 527 910 872 507 0.0 250
pORI00000098 79.275 386 58 19 527 910 872 507 0.0 250
pORI00000095 79.275 386 58 19 527 910 872 507 0.0 250
pORI00000238 96.0 150 6 0 132 281 1206 1057 0.0 244
pORI00000069 76.383 470 80 22 543 1002 3680 3232 0.0 224
pORI00000284 84.354 147 11 5 543 678 204 349 5.87e-32 134
pORI00000234 84.354 147 11 5 543 678 204 349 5.87e-32 134
pORI00000210 84.354 147 11 5 543 678 204 349 5.87e-32 134
pORI00000209 84.354 147 11 5 543 678 204 349 5.87e-32 134
pORI00000181 98.333 60 1 0 221 280 725 784 1.28e-23 106
pORI00000914 98.214 56 1 0 378 433 709 654 2.14e-21 99
pORI00000595 98.214 56 1 0 378 433 709 654 2.14e-21 99
pORI00000478 98.214 56 1 0 378 433 353 298 2.14e-21 99
pORI00000990 95.082 61 3 0 374 434 678 618 7.7e-21 97
pORI00000124 95.161 62 1 1 221 280 844 783 7.7e-21 97
pORI00000011 95.0 60 2 1 221 280 842 784 9.96e-20 94