RefSeq NC_011640
DoriC accession number pORI00000043
OriC length 873 nt
OriC AT content 0.4948
The location of oriC region 2308..3180 nt
Browse in NCBI
OriC map
OriC sequences
GATAGCCTCTGTTCGTGTTTTTGTTATATGCCATACGATTTGTTAGTACCTTAATAAAATGTACAGCTTTCATTGTGATTAGCTAGACTTTATGTCAAAGATTAACTTTGATTGCTTGTGTTTTAATCGATTTTTTTTACTTTCTTCTTGAGATTATCTGGCAGCAGCCGTAAGCTTCCGGCTGTGAACGAAAAAAACCGCCTTGGCGGGCGGTTTTTTCGAAAGGTTCAGTAGAGTTGGCGCTCTATGAACCGAGGTAACTGGCTTAAAGGGAGCGCAGTCACCAAAACTGTTCGTTTAGTTTAGCTTTAACTGGCGTATAACTTCAAGACTAACTCCCTAAATCAGTTACCAGTGGCTGCTGCCAGTGGCGCTTTGTCGTGTCTTTCCGGGTTGGACTCAAGACGATAGTTACCGGATTAGGCGCAGCAGTCGGACTGAACGGGGGGTTCGTGCATACAGTCCAGCTTGGAGCGAACTGCCTACCCGGAACTGAGTGTCAGGCGTGGAATGAGACAAACGCGGCCATAACAGCGGAATGACACCGGTAAACCGAAAGGCAGGAACAGGAGAGCGCACGAGGGAGCCATCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCACTGATTTGAGCGTCAGATTCCGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGGCCGCTGTGCGGCCTTTCCTTCTTTCCTCCATGCGATTACTCGGTTTTCTCGAGCGTTTCTACGCATGCTCCTGCCGCTCGCCGCAGCCGAACGGCAGGAGCGTAGCGACTGAGTGAGCGAGGAAGCGGAAAAGAGGAGATCCCTACACTGACCACTGACGCTCTGAGGCCTCTT
GATAGCCTCTGTTCGTGTTTTTGTTATATGCCATACGATTTGTTAGTACCTTAATAAAATGTACAGCTTTCATTGTGATTAGCTAGACTTTATGTCAAAGATTAACTTTGATTGCTTGTGTTTTAATCGATTTTTTTTACTTTCTTCTTGAGATTATCTGGCAGCAGCCGTAAGCTTCCGGCTGTGAACGAAAAAAACCGCCTTGGCGGGCGGTTTTTTCGAAAGGTTCAGTAGAGTTGGCGCTCTATGAACCGAGGTAACTGGCTTAAAGGGAGCGCAGTCACCAAAACTGTTCGTTTAGTTTAGCTTTAACTGGCGTATAACTTCAAGACTAACTCCCTAAATCAGTTACCAGTGGCTGCTGCCAGTGGCGCTTTGTCGTGTCTTTCCGGGTTGGACTCAAGACGATAGTTACCGGATTAGGCGCAGCAGTCGGACTGAACGGGGGGTTCGTGCATACAGTCCAGCTTGGAGCGAACTGCCTACCCGGAACTGAGTGTCAGGCGTGGAATGAGACAAACGCGGCCATAACAGCGGAATGACACCGGTAAACCGAAAGGCAGGAACAGGAGAGCGCACGAGGGAGCCATCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCACTGATTTGAGCGTCAGATTCCGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGGCCGCTGTGCGGCCTTTCCTTCTTTCCTCCATGCGATTACTCGGTTTTCTCGAGCGTTTCTACGCATGCTCCTGCCGCTCGCCGCAGCCGAACGGCAGGAGCGTAGCGACTGAGTGAGCGAGGAAGCGGAAAAGAGGAGATCCCTACACTGACCACTGACGCTCTGAGGCCTCTT
AT-rich region
The information of repeat sequences

Motif CWCCVCKVADCYGARHGKCAGG

StartP-valueSite
4831.30e-10AGCGAACTGCCTACCCGGAACTGAGTGTCAGGCGTGGAATGA
7762.48e-10GCTCCTGCCGCTCGCCGCAGCCGAACGGCAGGAGCGTAGCGA
5434.72e-10AGCGGAATGACACCGGTAAACCGAAAGGCAGGAACAGGAGAG
6358.69e-10CGGGTTTCGCCACCACTGATTTGAGCGTCAGATTCCGTGATG

Motif AGATTADCT

StartP-valueSite
993.30e-06TTTATGTCAAAGATTAACTTTGATTGCTT
1511.10e-05TTTCTTCTTGAGATTATCTGGCAGCAGCC
3291.39e-05TATAACTTCAAGACTAACTCCCTAAATCA
3003.40e-05CTGTTCGTTTAGTTTAGCTTTAACTGGCG
763.40e-05GCTTTCATTGTGATTAGCTAGACTTTATG

Motif AAAMRCSGCC

StartP-valueSite
6925.96e-07GAGCCTATGGAAAAACGGCCGCTGTGCGGC
1931.10e-06TGTGAACGAAAAAAACCGCCTTGGCGGGCG
5184.22e-06GGAATGAGACAAACGCGGCCATAACAGCGG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000043 100.0 873 0 0 1 873 1 873 0.0 1613
pORI00000056 90.818 697 51 11 182 873 45 733 0.0 920
pORI00000244 91.667 516 35 8 187 700 290 799 0.0 708
pORI00000061 90.299 536 42 10 169 700 193 722 0.0 693
pORI00000086 88.245 587 53 14 246 826 849 273 0.0 688
pORI00000110 90.385 520 37 13 187 700 2219 2731 0.0 671
pORI00000307 89.231 520 50 6 182 700 344 858 0.0 645
pORI00000116 89.231 520 50 6 182 700 344 858 0.0 645
pORI00000098 89.231 520 50 6 182 700 344 858 0.0 645
pORI00000095 89.231 520 50 6 182 700 344 858 0.0 645
pORI00000094 82.916 679 72 35 182 829 1773 1108 0.0 571
pORI00000093 82.916 679 72 35 182 829 857 192 0.0 571
pORI00000198 86.381 536 44 24 182 698 139 664 0.0 558
pORI00000060 94.663 356 19 0 345 700 2112 1757 0.0 553
pORI00000111 85.714 546 51 22 187 715 100 635 0.0 551
pORI00000238 94.382 356 19 1 345 700 476 830 0.0 545
pORI00000069 86.25 480 50 11 356 826 3336 3808 0.0 507
pORI00000315 81.67 551 73 22 184 714 812 1354 0.0 433
pORI00000314 90.136 294 28 1 349 642 247 539 0.0 381
pORI00000075 90.136 294 28 1 349 642 247 539 0.0 381
pORI00000320 84.946 372 35 15 346 698 336 705 0.0 357
pORI00000312 84.946 372 35 15 346 698 336 705 0.0 357
pORI00000058 78.902 583 73 34 169 715 41 609 0.0 350
pORI00000301 83.505 388 41 17 348 715 396 780 0.0 340
pORI00000294 83.463 387 43 17 348 715 915 531 0.0 340
pORI00000292 83.463 387 43 17 348 715 915 531 0.0 340
pORI00000290 83.463 387 43 17 348 715 906 522 0.0 340
pORI00000239 83.463 387 43 17 348 715 729 345 0.0 340
pORI00000224 83.505 388 41 17 348 715 396 780 0.0 340
pORI00000223 83.505 388 41 17 348 715 396 780 0.0 340
pORI00000222 83.505 388 41 17 348 715 396 780 0.0 340
pORI00000097 83.505 388 41 17 348 715 396 780 0.0 340
pORI00000092 83.505 388 41 17 348 715 396 780 0.0 340
pORI00000112 82.946 387 47 13 346 714 1194 1579 0.0 335
pORI00000309 82.812 384 46 17 350 715 271 652 0.0 326
pORI00000022 82.687 387 46 18 348 715 244 628 0.0 324
pORI00000306 82.116 397 52 16 348 726 910 515 0.0 322
pORI00000308 82.552 384 47 17 350 715 271 652 0.0 320
pORI00000012 82.383 386 46 14 350 715 288 671 0.0 316
pORI00000343 81.98 394 48 16 345 718 779 389 0.0 313
pORI00000284 86.911 191 13 6 520 699 392 203 0.0 204
pORI00000234 86.911 191 13 6 520 699 392 203 0.0 204
pORI00000210 86.911 191 13 6 520 699 392 203 0.0 204
pORI00000209 86.911 191 13 6 520 699 392 203 0.0 204
pORI00001192 100.0 57 0 0 773 829 256 312 8.26e-24 106
pORI00001084 100.0 57 0 0 773 829 678 622 8.26e-24 106
pORI00001059 100.0 57 0 0 773 829 256 312 8.26e-24 106
pORI00001058 100.0 57 0 0 773 829 256 312 8.26e-24 106
pORI00000999 100.0 57 0 0 773 829 459 515 8.26e-24 106
pORI00000998 100.0 57 0 0 773 829 256 312 8.26e-24 106
pORI00000968 100.0 57 0 0 773 829 256 312 8.26e-24 106
pORI00000723 100.0 57 0 0 773 829 796 740 8.26e-24 106
pORI00000722 100.0 57 0 0 773 829 796 740 8.26e-24 106
pORI00000604 100.0 57 0 0 773 829 256 312 8.26e-24 106
pORI00000578 100.0 57 0 0 773 829 459 515 8.26e-24 106
pORI00000548 100.0 57 0 0 773 829 790 734 8.26e-24 106
pORI00000240 89.796 49 2 2 669 717 1014 1059 6.52e-10 60