RefSeq NZ_CP010127
DoriC accession number pORI00000702
OriC length 1232 nt
OriC AT content 0.595
The location of oriC region 32953..34184 nt
Browse in NCBI
OriC map
OriC sequences
ACATTACCTATGGTTTTTAAGTTCTAATGGTGAAATCATAACCGCAAAGGTGGAAATGTGTAAAGCGGTTTATCCACCTTATGTATTTCCACCAAAACACGGATCACATGAAAGAGTTTTTATCATTAATATTCAATATGATAGAAATGCGCAGGTATCCACCTTTTAACGTCATACGTTAGATTAGAGCACTATAAAGAACTAAAGAAATGAAGATACAAAGATACGAATATCTGAATAAAAACAGAAAAATGCGTACCCATCCACCTTTCAGTGCGTACCCATCCACCTTTCAGTGCGCAGCCATCCACCTTTCATGAAAATTACAGTGCGTACCCATCCACCTTTCAGTGCGTACCCATCCACCTTTCATTTTGAGGCGACAAAAAACAACAGCTATCTTAATGAAATTATTGATAAAAAAACTGGCACAGTGTTTGCAGAATAAGTTAAAGTAAGTTAAAGATCTTAAAGTAGATCTACCGATCTACATTTAAGATCTTAAAAACAAGAAGTTTAATAAGCAAAAAAACACAAAAAATCTGTGGATAACTTTGCTCAAAACAAAAAATTCACACTACCTGTGGATAACTTTGCGTAAACCCGGAGGACAGATCATTCTGAACCAAGACAACCACACATAAAAACAACATGCTCACTTTTTAACCACTGCGCGTAATTGCCTGATGTTATCCCTGTGCTGTTCCGCTTCCTCGCTCACTAACTCGCTACGCTCGGTCGTTCGGCTGCGGCGAGCGGTGTCTCCTTTCTCAAAACCAGAAGAGTTCAGATCATACGATCCGTTGATTGATCCTTTTTGGATCTTTCACTGAGAAGCCCTGAATCGCTTTCTGCCGCTTCGTTCGATACAACCATGGTGAAACCATGCGAAATCGAAAAAATCGCTCAGAATGCGATACAGCGCGTTTTAGAGGGTATTTACAAAACAGTCGTTGCCTTGAGGAAATTTTGATCAAGATTGAACTCCTATCCGGATCATGGCAACAGATCACAGCAACAAGGCCACTAAAAAGCGTTGAGCGGCGTTAAACACCGTCAAACCGTAGCCGACTACAACGAAACGGGAAAAACGCTCAGAACGCGTTACAGAGCGTTTTAAGGCGATGTCGGAAAGAGCCATATCTCACCTGTTCTGATGTTTTTCTCAACATGAGCACTTTTAAAAGTGCTTTTAAAGATGCTATTATGCCAATGAGACAAGCGGAGGGCTT
ACATTACCTATGGTTTTTAAGTTCTAATGGTGAAATCATAACCGCAAAGGTGGAAATGTGTAAAGCGGTTTATCCACCTTATGTATTTCCACCAAAACACGGATCACATGAAAGAGTTTTTATCATTAATATTCAATATGATAGAAATGCGCAGGTATCCACCTTTTAACGTCATACGTTAGATTAGAGCACTATAAAGAACTAAAGAAATGAAGATACAAAGATACGAATATCTGAATAAAAACAGAAAAATGCGTACCCATCCACCTTTCAGTGCGTACCCATCCACCTTTCAGTGCGCAGCCATCCACCTTTCATGAAAATTACAGTGCGTACCCATCCACCTTTCAGTGCGTACCCATCCACCTTTCATTTTGAGGCGACAAAAAACAACAGCTATCTTAATGAAATTATTGATAAAAAAACTGGCACAGTGTTTGCAGAATAAGTTAAAGTAAGTTAAAGATCTTAAAGTAGATCTACCGATCTACATTTAAGATCTTAAAAACAAGAAGTTTAATAAGCAAAAAAACACAAAAAATCTGTGGATAACTTTGCTCAAAACAAAAAATTCACACTACCTGTGGATAACTTTGCGTAAACCCGGAGGACAGATCATTCTGAACCAAGACAACCACACATAAAAACAACATGCTCACTTTTTAACCACTGCGCGTAATTGCCTGATGTTATCCCTGTGCTGTTCCGCTTCCTCGCTCACTAACTCGCTACGCTCGGTCGTTCGGCTGCGGCGAGCGGTGTCTCCTTTCTCAAAACCAGAAGAGTTCAGATCATACGATCCGTTGATTGATCCTTTTTGGATCTTTCACTGAGAAGCCCTGAATCGCTTTCTGCCGCTTCGTTCGATACAACCATGGTGAAACCATGCGAAATCGAAAAAATCGCTCAGAATGCGATACAGCGCGTTTTAGAGGGTATTTACAAAACAGTCGTTGCCTTGAGGAAATTTTGATCAAGATTGAACTCCTATCCGGATCATGGCAACAGATCACAGCAACAAGGCCACTAAAAAGCGTTGAGCGGCGTTAAACACCGTCAAACCGTAGCCGACTACAACGAAACGGGAAAAACGCTCAGAACGCGTTACAGAGCGTTTTAAGGCGATGTCGGAAAGAGCCATATCTCACCTGTTCTGATGTTTTTCTCAACATGAGCACTTTTAAAAGTGCTTTTAAAGATGCTATTATGCCAATGAGACAAGCGGAGGGCTT
AT-rich region
The information of repeat sequences

Motif TGCGTACCCATCCACCTTTCA

StartP-valueSite
3521.70e-13CACCTTTCAGTGCGTACCCATCCACCTTTCATTTTGAGGCG
3301.70e-13AAAATTACAGTGCGTACCCATCCACCTTTCAGTGCGTACCC
2751.70e-13CACCTTTCAGTGCGTACCCATCCACCTTTCAGTGCGCAGCC
2531.70e-13AACAGAAAAATGCGTACCCATCCACCTTTCAGTGCGTACCC
2975.76e-13CACCTTTCAGTGCGCAGCCATCCACCTTTCATGAAAATTAC

Motif AARDCSMYYARAAHGCGWTRMRSVGCGTTWWAVRSSG

StartP-valueSite
10887.33e-20CGAAACGGGAAAAACGCTCAGAACGCGTTACAGAGCGTTTTAAGGCGATGTCGGAAA
9001.85e-19GAAATCGAAAAAATCGCTCAGAATGCGATACAGCGCGTTTTAGAGGGTATTTACAAA
10204.35e-16TCACAGCAACAAGGCCACTAAAAAGCGTTGAGCGGCGTTAAACACCGTCAAACCGTA

Motif GTTCNGMTGCTTCGHTC

StartP-valueSite
7036.91e-09TCCCTGTGCTGTTCCGCTTCCTCGCTCACTAACTCGC
7418.75e-09ACGCTCGGTCGTTCGGCTGCGGCGAGCGGTGTCTCCT
8492.24e-08CCTGAATCGCTTTCTGCCGCTTCGTTCGATACAACCA
11511.10e-07TATCTCACCTGTTCTGATGTTTTTCTCAACATGAGCA
7852.34e-07AACCAGAAGAGTTCAGATCATACGATCCGTTGATTGA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000702 100.0 1232 0 0 1 1232 1 1232 0.0 2276
pORI00000702 100.0 43 0 0 330 372 253 295 7.11e-16 81
pORI00000702 100.0 43 0 0 253 295 330 372 7.11e-16 81
pORI00000702 94.0 50 3 0 324 373 269 318 9.2e-15 77
pORI00000702 94.0 50 3 0 269 318 324 373 9.2e-15 77
pORI00000031 97.324 1233 32 1 1 1232 1233 1 0.0 2093
pORI00000031 100.0 43 0 0 330 372 981 939 7.11e-16 81
pORI00000031 95.745 47 2 0 327 373 962 916 9.2e-15 77
pORI00000031 97.674 43 1 0 253 295 904 862 3.31e-14 75
pORI00000921 96.339 1038 36 1 1 1036 1038 1 0.0 1705
pORI00000921 100.0 43 0 0 253 295 709 667 7.11e-16 81
pORI00000921 100.0 43 0 0 330 372 786 744 7.11e-16 81
pORI00000921 95.745 47 2 0 272 318 712 666 9.2e-15 77
pORI00000921 95.745 47 2 0 327 373 767 721 9.2e-15 77
pORI00001057 95.954 1038 40 1 1 1036 1 1038 0.0 1683
pORI00001057 100.0 43 0 0 330 372 253 295 7.11e-16 81
pORI00001057 94.0 50 3 0 324 373 269 318 9.2e-15 77
pORI00001057 97.674 43 1 0 253 295 330 372 3.31e-14 75
pORI00000947 94.256 1062 35 2 1 1036 1 1062 0.0 1600
pORI00000947 97.959 49 1 0 324 372 269 317 1.53e-17 86
pORI00000947 100.0 43 0 0 330 372 253 295 7.11e-16 81
pORI00000947 100.0 43 0 0 253 295 352 394 7.11e-16 81
pORI00000947 94.0 50 3 0 269 318 346 395 9.2e-15 77
pORI00000446 94.22 1038 36 2 1 1036 1016 1 0.0 1563
pORI00000446 100.0 43 0 0 330 372 764 722 7.11e-16 81
pORI00000446 95.745 47 2 0 327 373 745 699 9.2e-15 77
pORI00000421 94.941 850 38 5 386 1232 848 1 0.0 1327
pORI00000072 96.842 665 20 1 569 1232 397 1061 0.0 1110
pORI00000990 95.166 662 29 3 569 1227 809 148 0.0 1042
pORI00000834 82.46 878 118 24 254 1117 377 1232 0.0 736
pORI00001062 89.908 545 52 3 569 1111 457 1000 0.0 699
pORI00001164 82.185 769 103 22 254 1009 377 1124 0.0 630
pORI00001144 83.236 686 92 18 337 1009 676 1 0.0 608
pORI00001056 83.092 692 94 18 331 1009 443 1124 0.0 608
pORI00001020 83.236 686 92 18 337 1009 676 1 0.0 608
pORI00001011 83.092 692 94 18 331 1009 443 1124 0.0 608
pORI00000595 93.878 147 5 4 1087 1232 144 1 0.0 219
pORI00000595 92.857 70 3 1 704 773 709 642 5.46e-22 100
pORI00000914 93.197 147 6 3 1087 1232 144 1 0.0 213
pORI00000914 92.857 70 3 1 704 773 709 642 5.46e-22 100
pORI00000343 92.308 78 6 0 699 776 239 316 2.52e-25 111
pORI00000320 90.789 76 7 0 700 775 874 799 1.52e-22 102
pORI00000315 90.789 76 7 0 700 775 1507 1432 1.52e-22 102
pORI00000312 90.789 76 7 0 700 775 874 799 1.52e-22 102
pORI00000309 90.789 76 7 0 700 775 803 728 1.52e-22 102
pORI00000308 96.721 61 2 0 700 760 803 743 1.52e-22 102
pORI00000478 92.857 70 3 1 704 773 353 286 5.46e-22 100
pORI00000111 95.238 63 3 0 705 767 781 719 5.46e-22 100
pORI00000094 98.246 57 1 0 704 760 1108 1164 5.46e-22 100
pORI00000093 98.246 57 1 0 704 760 192 248 5.46e-22 100
pORI00000307 96.552 58 2 0 704 761 995 938 7.06e-21 97
pORI00000301 89.474 76 8 0 700 775 943 868 7.06e-21 97
pORI00000294 95.082 61 3 0 700 760 368 428 7.06e-21 97
pORI00000292 95.082 61 3 0 700 760 368 428 7.06e-21 97
pORI00000290 95.082 61 3 0 700 760 359 419 7.06e-21 97
pORI00000239 95.082 61 3 0 700 760 182 242 7.06e-21 97
pORI00000224 89.474 76 8 0 700 775 943 868 7.06e-21 97
pORI00000223 89.474 76 8 0 700 775 943 868 7.06e-21 97
pORI00000222 89.474 76 8 0 700 775 943 868 7.06e-21 97
pORI00000116 96.552 58 2 0 704 761 995 938 7.06e-21 97
pORI00000110 96.552 58 2 0 704 761 2868 2811 7.06e-21 97
pORI00000098 96.552 58 2 0 704 761 995 938 7.06e-21 97
pORI00000097 89.474 76 8 0 700 775 943 868 7.06e-21 97
pORI00000095 96.552 58 2 0 704 761 995 938 7.06e-21 97
pORI00000058 89.474 76 8 0 700 775 760 685 7.06e-21 97
pORI00000240 92.424 66 3 2 711 776 1151 1088 9.14e-20 94
pORI00000092 86.957 69 8 1 707 775 935 868 9.2e-15 77